Cow genome map

Conread name: Ss1.1-unkn-F_1_A02.5

Conread position: 464-601
Cow position: chr28:34082599-34082462 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 71, 98

Conread position: 481-601
Cow position: chr28:9287703-9287585 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 9

Conread position: 483-589
Cow position: chr28:10295624-10295729 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 16

Conread position: 483-594
Cow position: chr28:15286185-15286075 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 52, 9

Conread position: 483-595
Cow position: chr28:2645404-2645515 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-595
Cow position: chr28:22254502-22254391 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 9

Conread position: 483-595
Cow position: chr28:23685729-23685840 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-595
Cow position: chr28:34731422-34731533 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-596
Cow position: chr28:28766462-28766350 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 59, 20

Conread position: 483-597
Cow position: chr28:11452039-11451925 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 9

Conread position: 483-597
Cow position: chr28:13865237-13865350 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr28:445090-445207 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:482019-481902 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr28:1214121-1214004 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:1575814-1575697 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr28:1837439-1837556 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 54, 9

Conread position: 483-601
Cow position: chr28:1943605-1943488 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:1957054-1957171 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:2422400-2422517 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:2616133-2616016 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr28:3882259-3882142 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 11

Conread position: 483-601
Cow position: chr28:4308439-4308322 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 9

Conread position: 483-601
Cow position: chr28:5311659-5311542 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr28:6535106-6534989 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr28:7807615-7807733 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:8111024-8111141 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr28:9710463-9710346 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr28:10193344-10193227 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 9

Conread position: 483-601
Cow position: chr28:10870780-10870897 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:12156370-12156487 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 9

Conread position: 483-601
Cow position: chr28:12342932-12342815 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr28:12701558-12701675 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:13536367-13536484 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:15047899-15048016 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 9

Conread position: 483-601
Cow position: chr28:16387007-16387124 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 9

Conread position: 483-601
Cow position: chr28:19185914-19186031 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:19552696-19552577 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:21354660-21354777 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:22582472-22582589 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:23477935-23477818 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:23615844-23615961 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 8

Conread position: 483-601
Cow position: chr28:24592201-24592318 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:24603616-24603733 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr28:24993178-24993295 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:25683518-25683401 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 9

Conread position: 483-601
Cow position: chr28:25829086-25829203 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:26419310-26419193 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 9

Conread position: 483-601
Cow position: chr28:29044060-29044177 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:29682928-29683045 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:30098567-30098684 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:30249817-30249934 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:32589390-32589507 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:33256000-33256116 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 20

Conread position: 483-601
Cow position: chr28:33640260-33640377 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 9

Conread position: 483-601
Cow position: chr28:33689200-33689317 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 9

Conread position: 483-601
Cow position: chr28:34579967-34579850 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr28:34581662-34581545 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 9

Conread position: 483-601
Cow position: chr28:34597931-34598048 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-601
Cow position: chr28:34655775-34655892 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-602
Cow position: chr28:7745773-7745891 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 9

Conread position: 483-602
Cow position: chr28:21844393-21844511 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 483-602
Cow position: chr28:31842247-31842129 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 9

Conread position: 484-595
Cow position: chr28:17030271-17030157 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 79

Conread position: 484-597
Cow position: chr28:12935581-12935470 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 11

Conread position: 484-601
Cow position: chr28:5361578-5361462 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 50, 8

Conread position: 485-597
Cow position: chr28:7685238-7685126 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 77

Conread position: 485-601
Cow position: chr28:15264526-15264410 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 77

Conread position: 485-602
Cow position: chr28:3001173-3001057 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 7

Conread position: 485-602
Cow position: chr28:3024487-3024371 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 7

Conread position: 485-602
Cow position: chr28:12759084-12758967 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 20

Conread position: 485-602
Cow position: chr28:31142523-31142410 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 7

Conread position: 486-597
Cow position: chr28:10530026-10529915 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 76

Conread position: 486-601
Cow position: chr28:1537122-1537234 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 74

Conread position: 486-601
Cow position: chr28:10280522-10280636 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 486-601
Cow position: chr28:27478461-27478575 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 6

Conread position: 486-602
Cow position: chr28:9285926-9285810 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 76

Conread position: 487-600
Cow position: chr28:8717057-8716944 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 48, 75

Conread position: 487-601
Cow position: chr28:21894078-21893964 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 75

Conread position: 489-601
Cow position: chr28:25762480-25762592 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 71

Conread position: 500-602
Cow position: chr28:29199181-29199283 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 60

Conread position: 501-601
Cow position: chr28:7372798-7372698 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 61

Conread position: 501-601
Cow position: chr28:12981098-12980998 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 61

Conread position: 501-601
Cow position: chr28:17369757-17369857 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 59

Conread position: 501-601
Cow position: chr28:17687953-17687853 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 61

Conread position: 501-601
Cow position: chr28:23114830-23114730 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 61

Conread position: 501-601
Cow position: chr28:25767682-25767782 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 59

Conread position: 501-601
Cow position: chr28:29222579-29222479 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 61

Conread position: 501-602
Cow position: chr28:4938166-4938265 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 501-602
Cow position: chr28:5071707-5071606 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 61

Conread position: 501-602
Cow position: chr28:8022657-8022556 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 34, 61

Conread position: 501-602
Cow position: chr28:12429910-12430010 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 38, 49

Conread position: 501-602
Cow position: chr28:16211639-16211538 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 61

Conread position: 503-601
Cow position: chr28:7906837-7906739 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 59

Conread position: 503-601
Cow position: chr28:7946301-7946203 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 59

Conread position: 503-601
Cow position: chr28:17316319-17316418 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.