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Cow genome map

           
Conread name:
           
Ss1.1-unkn-F_1_A02.5
        

               
Conread position:
               
464-600
               

               
Cow position:
               
chr5:32697347-32697213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
477-601
               

               
Cow position:
               
chr5:10772356-10772232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 16
               

               
Conread position:
               
477-601
               

               
Cow position:
               
chr5:40890111-40889988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
478-601
               

               
Cow position:
               
chr5:46677086-46677208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
480-596
               

               
Cow position:
               
chr5:69466554-69466669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
480-601
               

               
Cow position:
               
chr5:9165183-9165060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 84
               

               
Conread position:
               
480-602
               

               
Cow position:
               
chr5:74644209-74644086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 83
               

               
Conread position:
               
481-597
               

               
Cow position:
               
chr5:22311530-22311644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
481-601
               

               
Cow position:
               
chr5:9074278-9074160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
483-592
               

               
Cow position:
               
chr5:31730651-31730759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
483-595
               

               
Cow position:
               
chr5:5106703-5106814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
483-595
               

               
Cow position:
               
chr5:10250792-10250681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-595
               

               
Cow position:
               
chr5:10299828-10299939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-595
               

               
Cow position:
               
chr5:18293100-18293211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-595
               

               
Cow position:
               
chr5:18557937-18557826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-595
               

               
Cow position:
               
chr5:20107551-20107440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-595
               

               
Cow position:
               
chr5:37431035-37430924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-595
               

               
Cow position:
               
chr5:41228568-41228458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 10
               

               
Conread position:
               
483-595
               

               
Cow position:
               
chr5:48026749-48026859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-595
               

               
Cow position:
               
chr5:57879348-57879459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-595
               

               
Cow position:
               
chr5:59064924-59065035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-595
               

               
Cow position:
               
chr5:64778525-64778414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-597
               

               
Cow position:
               
chr5:12315777-12315890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-597
               

               
Cow position:
               
chr5:31470119-31470005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
52, 8
               

               
Conread position:
               
483-600
               

               
Cow position:
               
chr5:2428267-2428151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
483-600
               

               
Cow position:
               
chr5:15362536-15362652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-600
               

               
Cow position:
               
chr5:21943832-21943949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:407922-408039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:825689-825806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:1059086-1058969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:1105403-1105287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:1639150-1639267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:1640394-1640277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:2330999-2330882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:2333076-2332959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:2917936-2918053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:3544776-3544893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:4041618-4041735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:5080938-5081055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:5814619-5814502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:6060151-6060034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:6455182-6455065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:6694525-6694408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:6735308-6735191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:6773046-6773163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:7066742-7066625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:7175778-7175896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 77
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:7397002-7397119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:7921932-7921815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:8178638-8178755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:9001882-9001765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:10260944-10260827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:10417867-10417750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:10479163-10479046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:11834981-11834864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:11986703-11986586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:11989001-11988884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:13453761-13453644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:14551122-14551005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 8
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:14557974-14557857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:15677537-15677654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:18072434-18072318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:19915261-19915378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:20269949-20270066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:21188412-21188529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:21189698-21189815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:23881850-23881733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:24086221-24086104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:24613974-24613857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:24633555-24633672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:26053212-26053329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:26075212-26075095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:27461589-27461472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:28013338-28013455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:28946843-28946727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:29223511-29223628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:29633503-29633386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:29634910-29635027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:29680543-29680661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:30259250-30259133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:31709772-31709889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:32964579-32964462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:33077426-33077543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:34115095-34115215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:34464127-34464011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:35543140-35543257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:36369511-36369394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:37190632-37190515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:37436597-37436714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:37586589-37586469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 80
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:37609528-37609411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:37626327-37626444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:37736142-37736259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:37782654-37782537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:39216736-39216853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:40116297-40116180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:40864107-40863990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:41067480-41067597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:41586755-41586872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:42667935-42667817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:43031458-43031341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:43350275-43350392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:44532745-44532862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:44708891-44708774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:44848558-44848441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:45025686-45025570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:46667552-46667669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:47055468-47055351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:49103305-49103422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:49239713-49239830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:49522182-49522299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:49970497-49970380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:52239786-52239669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:53075389-53075272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:54951636-54951519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:56271655-56271538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:56442738-56442855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:58770391-58770274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:58900563-58900446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:59518535-59518418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:61147249-61147366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:62436600-62436717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:64061808-64061925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:68273368-68273251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:69460858-69460976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
483-601
               

               
Cow position:
               
chr5:75754643-75754526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-602
               

               
Cow position:
               
chr5:13205919-13205801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
483-602
               

               
Cow position:
               
chr5:20780000-20779882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
483-602
               

               
Cow position:
               
chr5:34192401-34192520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 77
               

               
Conread position:
               
483-602
               

               
Cow position:
               
chr5:58460948-58460831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
484-595
               

               
Cow position:
               
chr5:42676726-42676836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
485-595
               

               
Cow position:
               
chr5:50483456-50483346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
50, 77
               

               
Conread position:
               
485-601
               

               
Cow position:
               
chr5:17982931-17982815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
485-601
               

               
Cow position:
               
chr5:29827510-29827626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
49, 76
               

               
Conread position:
               
485-601
               

               
Cow position:
               
chr5:34300350-34300466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
52, 77
               

               
Conread position:
               
485-601
               

               
Cow position:
               
chr5:63388206-63388321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 7
               

               
Conread position:
               
485-601
               

               
Cow position:
               
chr5:69337253-69337368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 7
               

               
Conread position:
               
485-601
               

               
Cow position:
               
chr5:70102347-70102231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
485-602
               

               
Cow position:
               
chr5:34888717-34888600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 77
               

               
Conread position:
               
485-602
               

               
Cow position:
               
chr5:53835154-53835269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
485-602
               

               
Cow position:
               
chr5:64823844-64823728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
486-593
               

               
Cow position:
               
chr5:5785954-5785846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 75
               

               
Conread position:
               
486-597
               

               
Cow position:
               
chr5:26467080-26467191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
486-601
               

               
Cow position:
               
chr5:2310122-2310008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 6
               

               
Conread position:
               
486-601
               

               
Cow position:
               
chr5:9071340-9071227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
486-601
               

               
Cow position:
               
chr5:57335880-57335766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 6
               

               
Conread position:
               
486-602
               

               
Cow position:
               
chr5:21828315-21828430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
48, 6
               

               
Conread position:
               
487-601
               

               
Cow position:
               
chr5:4753650-4753536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
487-601
               

               
Cow position:
               
chr5:34682879-34682765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
487-601
               

               
Cow position:
               
chr5:52289240-52289354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
487-601
               

               
Cow position:
               
chr5:59874065-59873951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
50, 75
               

               
Conread position:
               
487-601
               

               
Cow position:
               
chr5:72857360-72857474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
498-601
               

               
Cow position:
               
chr5:32088288-32088187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
500-601
               

               
Cow position:
               
chr5:16894297-16894196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
500-601
               

               
Cow position:
               
chr5:67462452-67462553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
501-595
               

               
Cow position:
               
chr5:59450661-59450567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
501-597
               

               
Cow position:
               
chr5:35967674-35967770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
501-601
               

               
Cow position:
               
chr5:4683003-4682903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
501-601
               

               
Cow position:
               
chr5:10283619-10283719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
501-601
               

               
Cow position:
               
chr5:10514617-10514717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
501-601
               

               
Cow position:
               
chr5:16508559-16508659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
501-601
               

               
Cow position:
               
chr5:23777775-23777875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
501-601
               

               
Cow position:
               
chr5:33870345-33870245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
501-601
               

               
Cow position:
               
chr5:35724735-35724835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
501-601
               

               
Cow position:
               
chr5:46587567-46587467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
501-601
               

               
Cow position:
               
chr5:47590097-47589997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
501-601
               

               
Cow position:
               
chr5:51151888-51151788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
501-601
               

               
Cow position:
               
chr5:52822711-52822611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
501-601
               

               
Cow position:
               
chr5:54927428-54927328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
501-601
               

               
Cow position:
               
chr5:54929756-54929656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
501-601
               

               
Cow position:
               
chr5:55756966-55756866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
38, 61
               

               
Conread position:
               
501-601
               

               
Cow position:
               
chr5:72046171-72046071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
501-602
               

               
Cow position:
               
chr5:15363367-15363468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
501-602
               

               
Cow position:
               
chr5:34638366-34638467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
501-602
               

               
Cow position:
               
chr5:57625866-57625967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
501-606
               

               
Cow position:
               
chr5:1641442-1641337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
502-602
               

               
Cow position:
               
chr5:40058052-40058152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 60
               
Show alignments to all cow chromosomes.