Cow genome map

Conread name: Ss1.1-unkn-MI-P-NA-aeg-h-08-1-UM.s1.ab1.3

Conread position: 452-633
Cow position: chr10:10565807-10565987 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 151, 27

Conread position: 454-636
Cow position: chr10:38542124-38542307 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 36

Conread position: 461-636
Cow position: chr10:9517213-9517034 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 48

Conread position: 461-636
Cow position: chr10:15292553-15292378 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 141, 16

Conread position: 461-636
Cow position: chr10:34664188-34664363 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 16

Conread position: 461-636
Cow position: chr10:63626725-63626556 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 21

Conread position: 473-636
Cow position: chr10:6012765-6012924 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 152, 5

Conread position: 476-629
Cow position: chr10:6567462-6567311 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 147, 13

Conread position: 479-634
Cow position: chr10:61923015-61923171 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 101, 136

Conread position: 480-636
Cow position: chr10:10082511-10082667 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 25

Conread position: 481-636
Cow position: chr10:130491-130335 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 25

Conread position: 482-625
Cow position: chr10:28039995-28040138 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 483-634
Cow position: chr10:10023534-10023382 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 142, 0

Conread position: 483-636
Cow position: chr10:24743537-24743382 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 130

Conread position: 483-636
Cow position: chr10:31534009-31533857 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 23

Conread position: 483-636
Cow position: chr10:45484437-45484593 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 131

Conread position: 483-636
Cow position: chr10:50110637-50110793 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 129

Conread position: 485-615
Cow position: chr10:6253242-6253375 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 485-632
Cow position: chr10:46378531-46378677 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 117, 20

Conread position: 485-634
Cow position: chr10:60936212-60936065 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 485-635
Cow position: chr10:15867503-15867353 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 55

Conread position: 485-636
Cow position: chr10:3317315-3317163 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 117, 127

Conread position: 485-636
Cow position: chr10:7737055-7736904 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 117, 16

Conread position: 485-636
Cow position: chr10:21490500-21490352 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 117, 20

Conread position: 485-636
Cow position: chr10:37041561-37041410 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 20

Conread position: 486-636
Cow position: chr10:37530259-37530405 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 139, 19

Conread position: 487-636
Cow position: chr10:6850781-6850632 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 115, 18

Conread position: 487-636
Cow position: chr10:11623165-11623313 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 14

Conread position: 487-636
Cow position: chr10:35246516-35246667 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 26

Conread position: 488-622
Cow position: chr10:9569301-9569434 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 113, 17

Conread position: 488-623
Cow position: chr10:60723422-60723555 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 13

Conread position: 488-624
Cow position: chr10:3998173-3998040 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 114, 13

Conread position: 488-626
Cow position: chr10:8094072-8094209 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 102, 17

Conread position: 488-631
Cow position: chr10:3984671-3984528 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 114, 17

Conread position: 488-632
Cow position: chr10:42644111-42643968 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 134, 13

Conread position: 488-632
Cow position: chr10:63046153-63046009 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 17

Conread position: 488-635
Cow position: chr10:10101366-10101220 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 71

Conread position: 488-635
Cow position: chr10:68095508-68095652 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 134, 13

Conread position: 488-636
Cow position: chr10:2116886-2117034 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 137, 24

Conread position: 488-636
Cow position: chr10:2736578-2736430 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr10:3114519-3114372 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 113, 17

Conread position: 488-636
Cow position: chr10:4640794-4640942 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 22

Conread position: 488-636
Cow position: chr10:8459786-8459638 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr10:9527138-9527287 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 111, 130

Conread position: 488-636
Cow position: chr10:9681610-9681758 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr10:15619830-15619978 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr10:20372866-20373012 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr10:22105043-22104895 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 102, 17

Conread position: 488-636
Cow position: chr10:23648730-23648878 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr10:23913293-23913439 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr10:28030373-28030521 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 137, 17

Conread position: 488-636
Cow position: chr10:28775397-28775250 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 13

Conread position: 488-636
Cow position: chr10:28932997-28932849 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr10:29174787-29174639 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr10:32282577-32282429 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr10:32704325-32704177 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr10:37773442-37773294 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 137, 17

Conread position: 488-636
Cow position: chr10:42636242-42636093 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 124

Conread position: 488-636
Cow position: chr10:44866437-44866288 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr10:49432672-49432524 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr10:51558963-51558815 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr10:53828145-53827996 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 17

Conread position: 488-636
Cow position: chr10:57143302-57143450 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 13

Conread position: 488-636
Cow position: chr10:62405233-62405381 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 17

Conread position: 490-624
Cow position: chr10:31384845-31384713 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 490-624
Cow position: chr10:39079968-39079836 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 112, 19

Conread position: 490-632
Cow position: chr10:35308411-35308269 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 113

Conread position: 490-635
Cow position: chr10:44669108-44669253 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 113, 15

Conread position: 490-636
Cow position: chr10:9580515-9580658 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 11

Conread position: 490-636
Cow position: chr10:21709679-21709823 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 139, 11

Conread position: 490-636
Cow position: chr10:33665075-33664930 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 19

Conread position: 491-636
Cow position: chr10:43288821-43288967 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 14

Conread position: 491-636
Cow position: chr10:44785848-44785703 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 134, 14

Conread position: 492-630
Cow position: chr10:24785340-24785202 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 110, 9

Conread position: 492-633
Cow position: chr10:53058747-53058887 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 110, 17

Conread position: 492-633
Cow position: chr10:58400102-58400236 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 110, 9

Conread position: 492-635
Cow position: chr10:63955054-63954911 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 110, 13

Conread position: 492-636
Cow position: chr10:9798959-9799103 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 133, 13

Conread position: 492-636
Cow position: chr10:37788445-37788589 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 110, 13

Conread position: 492-636
Cow position: chr10:47772973-47772829 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 16

Conread position: 493-624
Cow position: chr10:14866618-14866488 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 110, 12

Conread position: 493-635
Cow position: chr10:28735725-28735866 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 37

Conread position: 493-636
Cow position: chr10:29106267-29106411 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 109, 125

Conread position: 493-636
Cow position: chr10:31219015-31218870 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 120

Conread position: 493-636
Cow position: chr10:66875822-66875962 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 109, 8

Conread position: 494-636
Cow position: chr10:43489184-43489042 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 134, 11

Conread position: 495-630
Cow position: chr10:22978602-22978738 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 107, 117

Conread position: 495-635
Cow position: chr10:58265306-58265447 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 117

Conread position: 496-626
Cow position: chr10:38450268-38450398 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 496-636
Cow position: chr10:34666357-34666497 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 106, 118

Conread position: 501-636
Cow position: chr10:14908806-14908669 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 23

Conread position: 502-624
Cow position: chr10:42320614-42320736 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 100, 110

Conread position: 505-609
Cow position: chr10:14948307-14948202 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 505-612
Cow position: chr10:52288341-52288449 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 0

Show alignments to all cow chromosomes.