Cow genome map

Conread name: Ss1.1-unkn-MI-P-NA-aeg-h-08-1-UM.s1.ab1.3

Conread position: 461-634
Cow position: chr24:25677314-25677142 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 16

Conread position: 461-636
Cow position: chr24:16908903-16908726 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 152

Conread position: 461-636
Cow position: chr24:31357193-31357019 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 141, 16

Conread position: 461-636
Cow position: chr24:32823520-32823693 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 141, 16

Conread position: 462-636
Cow position: chr24:19643893-19643717 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 466-636
Cow position: chr24:38641969-38641800 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 117, 39

Conread position: 473-636
Cow position: chr24:35823611-35823776 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 41

Conread position: 474-634
Cow position: chr24:25110843-25110679 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 35, 141

Conread position: 474-635
Cow position: chr24:9380557-9380396 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 151, 139

Conread position: 478-636
Cow position: chr24:32359560-32359718 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 124, 27

Conread position: 482-634
Cow position: chr24:9088535-9088688 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 128

Conread position: 482-636
Cow position: chr24:30765905-30765752 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 124, 19

Conread position: 484-636
Cow position: chr24:36726731-36726583 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 118, 9

Conread position: 485-636
Cow position: chr24:17544364-17544515 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 117, 20

Conread position: 487-600
Cow position: chr24:7404344-7404456 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 488-624
Cow position: chr24:17566421-17566286 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 114, 17

Conread position: 488-633
Cow position: chr24:29190860-29190715 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 114, 24

Conread position: 488-635
Cow position: chr24:40253212-40253066 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 102, 72

Conread position: 488-636
Cow position: chr24:5608243-5608391 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 118, 17

Conread position: 488-636
Cow position: chr24:6413055-6412907 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 114, 21

Conread position: 488-636
Cow position: chr24:11940338-11940190 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 24

Conread position: 488-636
Cow position: chr24:12332130-12332279 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr24:16056289-16056436 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 13

Conread position: 488-636
Cow position: chr24:17752670-17752817 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr24:20283635-20283783 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr24:22975385-22975236 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 114, 122

Conread position: 488-636
Cow position: chr24:27762821-27762672 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 17

Conread position: 488-636
Cow position: chr24:29064392-29064540 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr24:30870392-30870540 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr24:32608888-32608740 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 20

Conread position: 488-636
Cow position: chr24:32759544-32759692 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr24:32853789-32853641 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr24:34761086-34760938 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr24:36027938-36028086 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 13

Conread position: 488-636
Cow position: chr24:36710415-36710268 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 21

Conread position: 488-636
Cow position: chr24:38588359-38588212 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 17

Conread position: 489-635
Cow position: chr24:31758715-31758863 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 21

Conread position: 490-624
Cow position: chr24:45087098-45086964 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 15

Conread position: 490-635
Cow position: chr24:28336488-28336631 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 112, 15

Conread position: 491-623
Cow position: chr24:29179935-29179804 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 120, 0

Conread position: 491-624
Cow position: chr24:6415736-6415604 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 111, 14

Conread position: 491-636
Cow position: chr24:39258417-39258274 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 134, 110

Conread position: 492-633
Cow position: chr24:33053448-33053589 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 110, 7

Conread position: 492-636
Cow position: chr24:9071273-9071418 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 120

Conread position: 493-626
Cow position: chr24:7030918-7031050 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 64

Conread position: 493-626
Cow position: chr24:43634685-43634551 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 120

Conread position: 496-636
Cow position: chr24:17368352-17368495 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 118

Conread position: 501-612
Cow position: chr24:39123011-39122898 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 501-636
Cow position: chr24:9549827-9549692 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 94

Conread position: 501-636
Cow position: chr24:33122491-33122355 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 101, 111

Conread position: 505-636
Cow position: chr24:26847045-26847177 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 107

Conread position: 507-632
Cow position: chr24:40445226-40445101 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 118, 104

Conread position: 509-636
Cow position: chr24:14609320-14609447 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 92, 103

Show alignments to all cow chromosomes.