Cow genome map
Conread name: | Ss1.1-unkn-MI-P-NA-aeg-h-08-1-UM.s1.ab1.3 |
Conread position: | 461-636 |
Cow position: | chr29:2694233-2694055 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 130 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 37, 18 |
Conread position: | 461-636 |
Cow position: | chr29:4480861-4481036 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 131 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 37, 16 |
Conread position: | 461-636 |
Cow position: | chr29:23980238-23980064 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 123 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 164, 18 |
Conread position: | 463-636 |
Cow position: | chr29:1605213-1605383 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 133 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 139, 7 |
Conread position: | 472-636 |
Cow position: | chr29:133492-133326 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 122 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 13, 141 |
Conread position: | 472-636 |
Cow position: | chr29:649552-649387 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 123 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 38, 24 |
Conread position: | 476-636 |
Cow position: | chr29:8589226-8589388 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 121 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 14, 135 |
Conread position: | 479-636 |
Cow position: | chr29:38229519-38229361 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 115 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 123, 131 |
Conread position: | 482-636 |
Cow position: | chr29:20254673-20254518 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 119 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 7, 24 |
Conread position: | 485-636 |
Cow position: | chr29:2837831-2837982 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 113 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 117, 27 |
Conread position: | 485-636 |
Cow position: | chr29:17153742-17153590 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 112 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 488-624 |
Cow position: | chr29:12798084-12797949 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 88, 13 |
Conread position: | 488-624 |
Cow position: | chr29:22935549-22935414 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 108 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 114, 17 |
Conread position: | 488-634 |
Cow position: | chr29:10297363-10297506 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 114 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 137, 13 |
Conread position: | 488-634 |
Cow position: | chr29:10820213-10820359 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 111 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 114, 17 |
Conread position: | 488-634 |
Cow position: | chr29:41183679-41183825 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 114 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 114, 17 |
Conread position: | 488-635 |
Cow position: | chr29:4875636-4875780 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 134, 113 |
Conread position: | 488-636 |
Cow position: | chr29:529015-529163 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 111 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 114, 17 |
Conread position: | 488-636 |
Cow position: | chr29:2103344-2103196 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 109 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 114, 17 |
Conread position: | 488-636 |
Cow position: | chr29:5240897-5240750 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 137, 17 |
Conread position: | 488-636 |
Cow position: | chr29:5961505-5961357 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 110 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 107, 17 |
Conread position: | 488-636 |
Cow position: | chr29:6934985-6934837 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 113 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 114, 17 |
Conread position: | 488-636 |
Cow position: | chr29:7290047-7289896 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 111 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 488-636 |
Cow position: | chr29:7811694-7811843 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 111, 17 |
Conread position: | 488-636 |
Cow position: | chr29:9639027-9639175 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 112 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 29, 17 |
Conread position: | 488-636 |
Cow position: | chr29:19619767-19619915 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 113 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 114, 17 |
Conread position: | 488-636 |
Cow position: | chr29:19761559-19761413 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 112, 12 |
Conread position: | 488-636 |
Cow position: | chr29:24420703-24420556 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 114 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 114, 17 |
Conread position: | 488-636 |
Cow position: | chr29:32175774-32175627 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 114 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 102, 13 |
Conread position: | 488-636 |
Cow position: | chr29:32807862-32807715 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 113 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 114, 17 |
Conread position: | 488-636 |
Cow position: | chr29:32962809-32962664 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 21, 103 |
Conread position: | 488-636 |
Cow position: | chr29:35076626-35076478 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 115 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 114, 17 |
Conread position: | 488-636 |
Cow position: | chr29:39076217-39076365 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 116 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 81, 13 |
Conread position: | 488-636 |
Cow position: | chr29:43327017-43326868 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 110 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 114, 122 |
Conread position: | 490-636 |
Cow position: | chr29:32644052-32643909 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 109, 15 |
Conread position: | 490-636 |
Cow position: | chr29:32806560-32806414 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 110 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 112, 15 |
Conread position: | 491-636 |
Cow position: | chr29:2307500-2307355 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 111, 14 |
Conread position: | 491-636 |
Cow position: | chr29:28696880-28697025 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 111, 14 |
Conread position: | 491-636 |
Cow position: | chr29:36209195-36209047 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 112 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 491-636 |
Cow position: | chr29:43692239-43692095 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 135, 14 |
Conread position: | 492-609 |
Cow position: | chr29:34737205-34737321 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 94 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 110, 9 |
Conread position: | 492-636 |
Cow position: | chr29:13044182-13044326 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 112 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 134, 81 |
Conread position: | 492-636 |
Cow position: | chr29:35228168-35228027 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 110, 13 |
Conread position: | 494-636 |
Cow position: | chr29:11365512-11365369 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 109 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 59, 11 |
Conread position: | 496-636 |
Cow position: | chr29:7724160-7724019 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 106 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 106, 116 |
Conread position: | 496-636 |
Cow position: | chr29:11786498-11786356 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 114 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 70, 120 |
Conread position: | 500-636 |
Cow position: | chr29:42940469-42940333 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 101 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 502-635 |
Cow position: | chr29:13077186-13077052 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 100, 110 |
Conread position: | 502-636 |
Cow position: | chr29:36633870-36634001 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 123, 94 |
Conread position: | 505-624 |
Cow position: | chr29:799177-799296 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 97 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 97, 107 |
Conread position: | 505-631 |
Cow position: | chr29:7664514-7664642 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 118, 0 |
Conread position: | 509-636 |
Cow position: | chr29:26263104-26262977 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 106 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 93, 45 |
Show alignments to all cow chromosomes.