Cow genome map

Conread name: Ss1.1-unkn-MI-P-NA-aeg-h-08-1-UM.s1.ab1.3

Conread position: 461-636
Cow position: chr29:2694233-2694055 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 18

Conread position: 461-636
Cow position: chr29:4480861-4481036 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 16

Conread position: 461-636
Cow position: chr29:23980238-23980064 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 164, 18

Conread position: 463-636
Cow position: chr29:1605213-1605383 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 139, 7

Conread position: 472-636
Cow position: chr29:133492-133326 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 141

Conread position: 472-636
Cow position: chr29:649552-649387 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 24

Conread position: 476-636
Cow position: chr29:8589226-8589388 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 135

Conread position: 479-636
Cow position: chr29:38229519-38229361 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 123, 131

Conread position: 482-636
Cow position: chr29:20254673-20254518 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 24

Conread position: 485-636
Cow position: chr29:2837831-2837982 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 117, 27

Conread position: 485-636
Cow position: chr29:17153742-17153590 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 27

Conread position: 488-624
Cow position: chr29:12798084-12797949 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 13

Conread position: 488-624
Cow position: chr29:22935549-22935414 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 114, 17

Conread position: 488-634
Cow position: chr29:10297363-10297506 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 137, 13

Conread position: 488-634
Cow position: chr29:10820213-10820359 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 114, 17

Conread position: 488-634
Cow position: chr29:41183679-41183825 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 17

Conread position: 488-635
Cow position: chr29:4875636-4875780 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 134, 113

Conread position: 488-636
Cow position: chr29:529015-529163 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr29:2103344-2103196 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr29:5240897-5240750 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 137, 17

Conread position: 488-636
Cow position: chr29:5961505-5961357 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 107, 17

Conread position: 488-636
Cow position: chr29:6934985-6934837 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr29:7290047-7289896 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 488-636
Cow position: chr29:7811694-7811843 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 17

Conread position: 488-636
Cow position: chr29:9639027-9639175 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 29, 17

Conread position: 488-636
Cow position: chr29:19619767-19619915 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr29:19761559-19761413 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 112, 12

Conread position: 488-636
Cow position: chr29:24420703-24420556 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr29:32175774-32175627 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 13

Conread position: 488-636
Cow position: chr29:32807862-32807715 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr29:32962809-32962664 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 103

Conread position: 488-636
Cow position: chr29:35076626-35076478 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr29:39076217-39076365 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 81, 13

Conread position: 488-636
Cow position: chr29:43327017-43326868 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 122

Conread position: 490-636
Cow position: chr29:32644052-32643909 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 109, 15

Conread position: 490-636
Cow position: chr29:32806560-32806414 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 15

Conread position: 491-636
Cow position: chr29:2307500-2307355 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 14

Conread position: 491-636
Cow position: chr29:28696880-28697025 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 111, 14

Conread position: 491-636
Cow position: chr29:36209195-36209047 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 491-636
Cow position: chr29:43692239-43692095 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 135, 14

Conread position: 492-609
Cow position: chr29:34737205-34737321 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 110, 9

Conread position: 492-636
Cow position: chr29:13044182-13044326 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 134, 81

Conread position: 492-636
Cow position: chr29:35228168-35228027 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 110, 13

Conread position: 494-636
Cow position: chr29:11365512-11365369 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 11

Conread position: 496-636
Cow position: chr29:7724160-7724019 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 106, 116

Conread position: 496-636
Cow position: chr29:11786498-11786356 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 120

Conread position: 500-636
Cow position: chr29:42940469-42940333 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 502-635
Cow position: chr29:13077186-13077052 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 110

Conread position: 502-636
Cow position: chr29:36633870-36634001 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 123, 94

Conread position: 505-624
Cow position: chr29:799177-799296 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 97, 107

Conread position: 505-631
Cow position: chr29:7664514-7664642 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 509-636
Cow position: chr29:26263104-26262977 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 93, 45

Show alignments to all cow chromosomes.