Cow genome map

Conread name: Ss1.1-unkn-MI-P-NA-aeg-h-08-1-UM.s1.ab1.3

Conread position: 452-636
Cow position: chr7:68928878-68928695 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 30

Conread position: 453-636
Cow position: chr7:46898790-46898973 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 12

Conread position: 460-636
Cow position: chr7:67759799-67759626 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 140, 75

Conread position: 461-624
Cow position: chr7:47045802-47045640 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 140, 16

Conread position: 461-636
Cow position: chr7:23130382-23130204 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 36, 16

Conread position: 461-636
Cow position: chr7:39795445-39795270 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 141, 18

Conread position: 461-636
Cow position: chr7:66224102-66224276 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 18

Conread position: 461-636
Cow position: chr7:69065838-69065664 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 144, 16

Conread position: 472-636
Cow position: chr7:61762652-61762490 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 130, 19

Conread position: 474-636
Cow position: chr7:5175437-5175600 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 15, 32

Conread position: 475-636
Cow position: chr7:42334689-42334531 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 126, 18

Conread position: 475-636
Cow position: chr7:64405870-64405713 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 127, 14

Conread position: 477-636
Cow position: chr7:13854777-13854620 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 125, 11

Conread position: 479-636
Cow position: chr7:33719302-33719145 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 123, 115

Conread position: 481-636
Cow position: chr7:13238046-13238202 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 121, 131

Conread position: 483-636
Cow position: chr7:35428223-35428377 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 142, 0

Conread position: 483-636
Cow position: chr7:49070074-49070229 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 130

Conread position: 483-636
Cow position: chr7:68314498-68314346 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 119, 18

Conread position: 485-635
Cow position: chr7:48860186-48860333 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 16

Conread position: 485-636
Cow position: chr7:21124115-21124266 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 117, 20

Conread position: 485-636
Cow position: chr7:39401285-39401134 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 117, 20

Conread position: 485-636
Cow position: chr7:56822167-56822318 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 20

Conread position: 485-636
Cow position: chr7:57910921-57910769 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 105, 125

Conread position: 487-636
Cow position: chr7:21009614-21009766 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 488-605
Cow position: chr7:36745625-36745507 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 92, 20

Conread position: 488-626
Cow position: chr7:36096590-36096453 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 115, 17

Conread position: 488-632
Cow position: chr7:24851705-24851849 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 93

Conread position: 488-634
Cow position: chr7:14519168-14519314 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 137, 17

Conread position: 488-634
Cow position: chr7:16934856-16934709 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 102, 17

Conread position: 488-634
Cow position: chr7:51194247-51194100 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 21

Conread position: 488-635
Cow position: chr7:30664573-30664426 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 114, 17

Conread position: 488-635
Cow position: chr7:42593996-42594144 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 114, 124

Conread position: 488-636
Cow position: chr7:759306-759454 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr7:1367143-1367291 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr7:1721619-1721768 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 102, 33

Conread position: 488-636
Cow position: chr7:8140531-8140679 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr7:14135263-14135411 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr7:21315435-21315287 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 114, 16

Conread position: 488-636
Cow position: chr7:23457462-23457611 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 124

Conread position: 488-636
Cow position: chr7:27142544-27142396 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 13

Conread position: 488-636
Cow position: chr7:27713134-27712987 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 137, 17

Conread position: 488-636
Cow position: chr7:30115405-30115552 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr7:32283232-32283085 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 137, 13

Conread position: 488-636
Cow position: chr7:34082981-34082833 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 137, 13

Conread position: 488-636
Cow position: chr7:39902895-39902746 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 114, 124

Conread position: 488-636
Cow position: chr7:40318251-40318103 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr7:40404818-40404669 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 108, 17

Conread position: 488-636
Cow position: chr7:46749533-46749385 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr7:52167340-52167192 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 22

Conread position: 488-636
Cow position: chr7:53070672-53070525 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 137, 17

Conread position: 488-636
Cow position: chr7:55290027-55290175 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr7:57024532-57024676 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 138, 17

Conread position: 488-636
Cow position: chr7:62793096-62792948 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 114, 17

Conread position: 488-636
Cow position: chr7:62991269-62991120 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 126

Conread position: 488-636
Cow position: chr7:66908794-66908646 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 114, 24

Conread position: 488-636
Cow position: chr7:67802880-67802732 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 17

Conread position: 489-636
Cow position: chr7:31878020-31877873 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 113, 16

Conread position: 490-633
Cow position: chr7:65431361-65431505 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 11

Conread position: 490-636
Cow position: chr7:18964237-18964092 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 129, 15

Conread position: 490-636
Cow position: chr7:48019470-48019324 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 112, 18

Conread position: 491-624
Cow position: chr7:25444692-25444560 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 10

Conread position: 491-634
Cow position: chr7:60741390-60741536 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 123

Conread position: 491-634
Cow position: chr7:68446355-68446211 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 50

Conread position: 491-636
Cow position: chr7:51026-51176 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 124

Conread position: 491-636
Cow position: chr7:4451911-4451763 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 111, 10

Conread position: 491-636
Cow position: chr7:19798912-19799059 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 122

Conread position: 491-636
Cow position: chr7:23554511-23554369 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 134, 14

Conread position: 491-636
Cow position: chr7:28162622-28162477 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 17

Conread position: 491-636
Cow position: chr7:44745302-44745447 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 111, 14

Conread position: 492-636
Cow position: chr7:467028-467174 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 10, 121

Conread position: 492-636
Cow position: chr7:14081651-14081792 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 13

Conread position: 492-636
Cow position: chr7:20536626-20536483 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 110, 13

Conread position: 492-636
Cow position: chr7:49750446-49750301 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 13

Conread position: 492-636
Cow position: chr7:57209296-57209440 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 133, 16

Conread position: 493-605
Cow position: chr7:45748579-45748690 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 109, 12

Conread position: 493-636
Cow position: chr7:7175303-7175164 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 133, 109

Conread position: 494-633
Cow position: chr7:61621886-61622023 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 131, 11

Conread position: 494-635
Cow position: chr7:48274679-48274820 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 105, 11

Conread position: 496-597
Cow position: chr7:5250623-5250724 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 496-624
Cow position: chr7:68529149-68529021 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 106, 116

Conread position: 496-633
Cow position: chr7:59558840-59558978 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 496-636
Cow position: chr7:34668722-34668582 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 9

Conread position: 497-636
Cow position: chr7:10070396-10070535 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 105, 8

Conread position: 499-635
Cow position: chr7:50881651-50881515 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 57

Conread position: 500-636
Cow position: chr7:60834251-60834385 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 18

Conread position: 501-636
Cow position: chr7:58302636-58302770 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 64

Conread position: 505-636
Cow position: chr7:29280686-29280817 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 106

Conread position: 512-636
Cow position: chr7:24741583-24741708 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 100

Conread position: 512-636
Cow position: chr7:43110242-43110367 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 522-635
Cow position: chr7:4542964-4543078 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 90

Conread position: 522-636
Cow position: chr7:36128284-36128169 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 93

Show alignments to all cow chromosomes.