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Cow genome map

           
Conread name:
           
Ss1.1-unkn-MI-P-NA-afr-a-10-1-UM.s1.3
        

               
Conread position:
               
1-119
               

               
Cow position:
               
chr12:42185703-42185820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr12:4719405-4719531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr12:13066276-13066148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr12:21088952-21088815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr12:37793045-37792904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr12:26233375-26233231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr12:43103566-43103719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
28, 65
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr12:35136038-35136194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr12:35359536-35359699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr12:27717584-27717749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr12:23441196-23441030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 16
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr12:29498976-29498801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr12:8718619-8718435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr12:37697727-37697539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr12:26316746-26316934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr12:31947693-31947889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr12:17012111-17012311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 138
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr12:19715853-19715665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
185, 16
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr12:22201931-22201734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr12:23039493-23039292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr12:759147-759349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr12:5713946-5714149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr12:17486852-17486657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr12:1093842-1094041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr12:4518746-4518539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr12:21946731-21946930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr12:29428553-29428342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr12:3905828-3906036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr12:17663704-17663919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 7
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr12:25619910-25619700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr12:17629304-17629089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr12:28650411-28650637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr12:3615004-3615227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr12:10931837-10932054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr12:15821471-15821685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr12:27851904-27851686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr12:28707877-28707659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr12:24579094-24578873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr12:23210396-23210619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr12:23432121-23432360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr12:29909280-29909044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr12:26672661-26672893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr12:6412608-6412343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr12:25513408-25513671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
27, 151
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr12:39463661-39463932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr12:42855803-42855533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr12:19198789-19199067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr12:45689418-45689133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 96
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr12:34788893-34788597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr12:31605424-31605137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
232, 86
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr12:28704853-28705141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr12:28763266-28762968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr12:39704348-39704647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 20
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr12:25606189-25606489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
95, 153
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr12:180649-180346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
200, 16
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr12:8673416-8673109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
21, 178
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr12:17421072-17421381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr12:19696904-19697217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr12:20169884-20169582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 16
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr12:21497170-21496864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr12:21620181-21619879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 16
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr12:22213927-22213619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
77, 100
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr12:27505900-27505596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 14
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr12:39158792-39158489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr12:39356812-39357119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr12:7398528-7398840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr12:22480855-22481165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr12:44176383-44176067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
242, 210
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr12:38894113-38894430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 16
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr12:21075566-21075887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
268, 15
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr12:3050465-3050140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr12:31261362-31261698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 16
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr12:23445931-23446253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr12:18553758-18554114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 16
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr12:9400228-9400592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr12:18944155-18943800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr12:3372204-3372544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 14
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr12:8487840-8487481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr12:15078946-15079301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 16
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr12:15173315-15173657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 186
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr12:21828565-21828937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
51, 201
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr12:22868654-22869003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr12:10008363-10008706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr12:25357740-25357376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 229
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr12:27808981-27808621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr12:48437414-48437051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr12:6404037-6403677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr12:9987950-9987598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 15
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr12:11101998-11102359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 16
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr12:11539680-11539313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr12:28188091-28187736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 16
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr12:29359624-29359264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
24, 107
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr12:35232356-35232005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr12:41337479-41337126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 16
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr12:40428828-40428469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr12:16961101-16961456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
197, 14
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr12:47415546-47415905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 16
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr12:1884020-1883646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr12:5829628-5830015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr12:6469544-6469185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 20
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr12:11082571-11082930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr12:26777653-26777285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 16
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr12:5149080-5149457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr12:18233405-18233025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr12:2967671-2968056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 16
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr12:4718580-4718956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 16
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr12:9142892-9143276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 16
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr12:17982133-17982503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 21
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr12:37123014-37123390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 12
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr12:45161010-45160625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 16
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr12:18123189-18123568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 15
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr12:4593593-4593990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 16
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr12:40806895-40807289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr12:747734-748127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr12:15231768-15232177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr12:19420442-19420040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr12:6186403-6186001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr12:21212533-21212929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 15
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr12:27055100-27055502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr12:3716526-3716107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr12:30578961-30578561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 16
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr12:9106947-9107339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 16
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr12:17007697-17008098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 16
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr12:37843506-37843107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 16
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr12:3181159-3181538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
148, 15
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr12:550863-550456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 16
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr12:25096551-25096145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 16
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr12:27928976-27928570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 16
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr12:31328580-31328178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 16
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr12:2286078-2286485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 16
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr12:15938752-15938366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 20
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr12:19040119-19039709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 20
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr12:24028733-24028321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr12:4008787-4008374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 98
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr12:6105586-6105177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 14
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr12:11540662-11540252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr12:18010932-18011339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 187
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr12:20218516-20218915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
320, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr12:25260003-25259597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr12:31742268-31741863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr12:40868083-40868492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr12:42061179-42061586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 20
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr12:38784620-38785042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
40, 204
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr12:10461498-10461918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr12:3950836-3950417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr12:9414269-9413852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 16
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr12:24440310-24440754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 20
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr12:34673825-34673405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
409, 16
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr12:19868964-19869406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr12:19865740-19866181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 16
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr12:2242390-2241949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 15
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr12:5800530-5800978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 16
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr12:3039014-3039469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 15
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr12:11056391-11056832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
193, 16
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr12:37770369-37770835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 16
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr12:7001112-7000644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr12:18421427-18420962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 20
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr12:27563885-27563417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
1-471
               

               
Cow position:
               
chr12:18936897-18937369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 16
               

               
Conread position:
               
1-471
               

               
Cow position:
               
chr12:28572201-28572650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 16
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr12:12754127-12753655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 16
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr12:5273621-5273153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 16
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr12:40910782-40910320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 97
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr12:11607661-11607178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 16
               

               
Conread position:
               
2-132
               

               
Cow position:
               
chr12:37757162-37757291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-135
               

               
Cow position:
               
chr12:17786890-17786758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-151
               

               
Cow position:
               
chr12:14214812-14214960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr12:21723888-21724070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chr12:27365109-27365307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr12:35163534-35163733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr12:32918078-32918280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr12:23258014-23258217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr12:32849317-32849531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
80, 5
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr12:249570-249354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr12:272875-272659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr12:24469765-24469977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr12:32011026-32010810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr12:32700516-32700733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
151, 15
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr12:36986334-36986116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-231
               

               
Cow position:
               
chr12:471837-471611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-231
               

               
Cow position:
               
chr12:14568073-14567847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr12:38263227-38262997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr12:4965086-4964851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr12:14121547-14121312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr12:25946966-25946731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr12:46129520-46129755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr12:8841289-8841001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr12:15831234-15830931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr12:1055758-1055457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr12:464859-464557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr12:1076104-1076406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr12:1406198-1406505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
182, 15
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr12:5327471-5327170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr12:13166953-13166651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr12:21433093-21433395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr12:22464516-22464816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr12:23475498-23475798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr12:25957098-25956796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 15
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr12:26809526-26809828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr12:33926644-33926946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr12:29066967-29067271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr12:38111230-38111540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr12:1475994-1475674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 14
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr12:379228-379546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 0
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr12:9447478-9447161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr12:20204030-20204347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr12:34514139-34513822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr12:43002907-43002590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr12:46111366-46111049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr12:32146879-32146561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr12:36368557-36368897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr12:1854688-1854334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 200
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr12:2253192-2253542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 15
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr12:21579036-21578688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr12:32088981-32089328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr12:41376515-41376163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 15
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr12:3196746-3197105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr12:36204399-36204042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
2-364
               

               
Cow position:
               
chr12:10359445-10359811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 201
               

               
Conread position:
               
2-364
               

               
Cow position:
               
chr12:37514730-37514381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 20
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr12:21312770-21313135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr12:29502110-29502475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr12:32900401-32900036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 15
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr12:34365940-34366304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 15
               

               
Conread position:
               
2-367
               

               
Cow position:
               
chr12:36450289-36450654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
2-370
               

               
Cow position:
               
chr12:33579916-33580284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-377
               

               
Cow position:
               
chr12:31835400-31835773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 15
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr12:21250564-21250184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr12:18724502-18724886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr12:21665889-21666273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr12:36287260-36286877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr12:36571941-36572320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr12:10442260-10442657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr12:2821359-2821758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr12:3364638-3365038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 200
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr12:3545403-3545802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr12:5776827-5776429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr12:8751141-8751535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
300, 19
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr12:23473510-23473111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr12:29444674-29444275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr12:32758445-32758844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr12:41183889-41184287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr12:41185321-41185720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-404
               

               
Cow position:
               
chr12:33485684-33486091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 15
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr12:32786487-32786098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr12:22748963-22749351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 15
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr12:8970274-8969865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 184
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr12:22979142-22978739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr12:27455074-27454666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 15
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr12:30011220-30010817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
279, 14
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr12:30593359-30592951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:1007767-1008175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:1437015-1436606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:1863219-1862810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:1885589-1885184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:2228672-2228263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:3567087-3567495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:3875752-3875345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:4201456-4201865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:5110320-5109912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 14
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:5813223-5813631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:7127315-7127718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:7690514-7690105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:7873123-7873533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 200
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:8542128-8541722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:8770512-8770913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
240, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:12788004-12787595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:12928158-12927762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
279, 20
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:13042489-13042085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:13329156-13329565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:14424108-14424517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:14940724-14941133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:15925002-15924593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:18055834-18055436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
278, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:18116151-18116560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:21419778-21419367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:21672183-21671773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:22933064-22932656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:23137577-23137166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:25147869-25147464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:25265585-25265176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 200
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:25575180-25574771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:25839035-25839444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:26268465-26268056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:26333473-26333882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:29128044-29127634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:30016327-30015923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 14
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:30059310-30059719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:30143288-30143697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:31027069-31026661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:31260684-31260275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:32041682-32041273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:32340543-32340952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:32657344-32657751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
333, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:34965195-34965604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:35124224-35124633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:36212133-36211723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:36485652-36485243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:36959725-36959324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:37562751-37563161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 200
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:39930916-39931325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:41711019-41710610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:43470717-43471126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:44758174-44758583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr12:46124461-46124870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr12:27435213-27434798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 15
               

               
Conread position:
               
2-439
               

               
Cow position:
               
chr12:15719819-15719379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 15
               

               
Conread position:
               
2-440
               

               
Cow position:
               
chr12:46332876-46333286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 151
               

               
Conread position:
               
2-445
               

               
Cow position:
               
chr12:17472716-17472284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 19
               

               
Conread position:
               
2-445
               

               
Cow position:
               
chr12:41159078-41159531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr12:62964-63442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr12:132099-132579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr12:8656309-8656792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr12:10227492-10227973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr12:17719047-17719530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr12:22517099-22516620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr12:27615359-27615841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr12:32320165-32320647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr12:36446136-36446614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr12:37832400-37832882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr12:43533838-43534321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 200
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr12:40270857-40270644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr12:16606278-16606064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr12:17023631-17023865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr12:34177307-34177541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr12:35755142-35754844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-365
               

               
Cow position:
               
chr12:19851836-19852182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-384
               

               
Cow position:
               
chr12:25435306-25435688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
3-385
               

               
Cow position:
               
chr12:36118472-36118856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 14
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr12:1006325-1005929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 58
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr12:32244435-32244027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 14
               

               
Conread position:
               
3-411
               

               
Cow position:
               
chr12:19155105-19154711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 14
               

               
Conread position:
               
3-466
               

               
Cow position:
               
chr12:17079763-17080218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 19
               

               
Conread position:
               
3-476
               

               
Cow position:
               
chr12:2710990-2711466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 9
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr12:5905277-5905485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr12:5658597-5658344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
103, 13
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr12:43945056-43944801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr12:38678193-38678499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 13
               

               
Conread position:
               
4-340
               

               
Cow position:
               
chr12:23382058-23381727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 35
               

               
Conread position:
               
4-354
               

               
Cow position:
               
chr12:5750981-5750631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr12:10189006-10188647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr12:9482777-9482422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
285, 13
               

               
Conread position:
               
4-400
               

               
Cow position:
               
chr12:1408585-1408983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
294, 13
               

               
Conread position:
               
4-402
               

               
Cow position:
               
chr12:35368130-35368537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 123
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr12:21050203-21049796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 13
               

               
Conread position:
               
4-421
               

               
Cow position:
               
chr12:19691737-19691316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
4-468
               

               
Cow position:
               
chr12:11835742-11836194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
4-473
               

               
Cow position:
               
chr12:6530345-6530813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
4-484
               

               
Cow position:
               
chr12:1511012-1510532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 13
               

               
Conread position:
               
5-205
               

               
Cow position:
               
chr12:28558818-28559024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
5-221
               

               
Cow position:
               
chr12:11108728-11108952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
111, 16
               

               
Conread position:
               
5-224
               

               
Cow position:
               
chr12:9893168-9892945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
5-306
               

               
Cow position:
               
chr12:13957292-13957590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
5-354
               

               
Cow position:
               
chr12:8772970-8772606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 222
               

               
Conread position:
               
5-356
               

               
Cow position:
               
chr12:27176152-27175816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
5-356
               

               
Cow position:
               
chr12:27192857-27193193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
5-371
               

               
Cow position:
               
chr12:19125320-19124960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 12
               

               
Conread position:
               
5-397
               

               
Cow position:
               
chr12:44766581-44766971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 183
               

               
Conread position:
               
5-399
               

               
Cow position:
               
chr12:24755522-24755133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
359, 12
               

               
Conread position:
               
5-468
               

               
Cow position:
               
chr12:31430064-31429608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
6-151
               

               
Cow position:
               
chr12:28012474-28012330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr12:42283624-42283395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
8-199
               

               
Cow position:
               
chr12:8523539-8523730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 6
               

               
Conread position:
               
8-203
               

               
Cow position:
               
chr12:565015-565213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
8-206
               

               
Cow position:
               
chr12:22687238-22687435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
8-279
               

               
Cow position:
               
chr12:10490815-10491074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
8-288
               

               
Cow position:
               
chr12:25821209-25820936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 9
               

               
Conread position:
               
8-326
               

               
Cow position:
               
chr12:15034469-15034148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
8-332
               

               
Cow position:
               
chr12:23490737-23490414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
8-361
               

               
Cow position:
               
chr12:7170301-7169952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
70, 178
               

               
Conread position:
               
8-367
               

               
Cow position:
               
chr12:7885143-7884809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 9
               

               
Conread position:
               
10-402
               

               
Cow position:
               
chr12:36013119-36012719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 245
               

               
Conread position:
               
12-298
               

               
Cow position:
               
chr12:31035343-31035634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 107
               

               
Conread position:
               
12-410
               

               
Cow position:
               
chr12:14141029-14141428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
26, 192
               

               
Conread position:
               
16-211
               

               
Cow position:
               
chr12:42698980-42698786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
16-303
               

               
Cow position:
               
chr12:8142603-8142305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 95
               

               
Conread position:
               
16-475
               

               
Cow position:
               
chr12:43475868-43476319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 170
               

               
Conread position:
               
17-172
               

               
Cow position:
               
chr12:14132274-14132116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
17-183
               

               
Cow position:
               
chr12:24657667-24657501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 110
               

               
Conread position:
               
17-204
               

               
Cow position:
               
chr12:41184876-41184684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
64, 145
               

               
Conread position:
               
17-204
               

               
Cow position:
               
chr12:41186309-41186117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
64, 145
               

               
Conread position:
               
17-221
               

               
Cow position:
               
chr12:22594513-22594715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
17-244
               

               
Cow position:
               
chr12:46673916-46673693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
17-248
               

               
Cow position:
               
chr12:22340835-22341060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
17-279
               

               
Cow position:
               
chr12:25200579-25200320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
52, 174
               

               
Conread position:
               
17-280
               

               
Cow position:
               
chr12:37516433-37516163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 183
               

               
Conread position:
               
17-300
               

               
Cow position:
               
chr12:48477967-48477686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 185
               

               
Conread position:
               
17-306
               

               
Cow position:
               
chr12:16738117-16738391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
17-307
               

               
Cow position:
               
chr12:11256562-11256274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
17-307
               

               
Cow position:
               
chr12:24206404-24206683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
60, 135
               

               
Conread position:
               
17-307
               

               
Cow position:
               
chr12:45630290-45630005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 58
               

               
Conread position:
               
17-309
               

               
Cow position:
               
chr12:19873674-19873949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
17-332
               

               
Cow position:
               
chr12:4544479-4544153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
62, 318
               

               
Conread position:
               
17-336
               

               
Cow position:
               
chr12:20655149-20654838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
57, 177
               

               
Conread position:
               
17-344
               

               
Cow position:
               
chr12:26295185-26294864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
17-346
               

               
Cow position:
               
chr12:12296356-12296676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 112
               

               
Conread position:
               
17-355
               

               
Cow position:
               
chr12:34491423-34491085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
91, 186
               

               
Conread position:
               
17-356
               

               
Cow position:
               
chr12:7869660-7870000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
55, 186
               

               
Conread position:
               
17-356
               

               
Cow position:
               
chr12:27993312-27992971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 185
               

               
Conread position:
               
17-385
               

               
Cow position:
               
chr12:47486041-47486404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
48, 199
               

               
Conread position:
               
17-392
               

               
Cow position:
               
chr12:11582919-11583285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 185
               

               
Conread position:
               
17-400
               

               
Cow position:
               
chr12:8172682-8173062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 6
               

               
Conread position:
               
17-400
               

               
Cow position:
               
chr12:18545383-18545763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 191
               

               
Conread position:
               
17-400
               

               
Cow position:
               
chr12:30637035-30636652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 92
               

               
Conread position:
               
17-405
               

               
Cow position:
               
chr12:26869278-26868895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 50
               

               
Conread position:
               
17-406
               

               
Cow position:
               
chr12:20316993-20316612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 195
               

               
Conread position:
               
17-410
               

               
Cow position:
               
chr12:10076432-10076827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 185
               

               
Conread position:
               
17-421
               

               
Cow position:
               
chr12:36568534-36568142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
308, 167
               

               
Conread position:
               
17-439
               

               
Cow position:
               
chr12:35311161-35310747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 179
               

               
Conread position:
               
17-440
               

               
Cow position:
               
chr12:47928729-47929149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 146
               

               
Conread position:
               
17-474
               

               
Cow position:
               
chr12:21045542-21045109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
348, 191
               

               
Conread position:
               
18-221
               

               
Cow position:
               
chr12:6316049-6316256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 180
               

               
Conread position:
               
18-303
               

               
Cow position:
               
chr12:5146344-5146628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
18-308
               

               
Cow position:
               
chr12:37114610-37114317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
18-364
               

               
Cow position:
               
chr12:33403493-33403158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
48, 144
               

               
Conread position:
               
18-399
               

               
Cow position:
               
chr12:21217342-21216958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 184
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr12:3070625-3071013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 66
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr12:29486629-29487019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
19-224
               

               
Cow position:
               
chr12:40163056-40163264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
63, 186
               

               
Conread position:
               
19-399
               

               
Cow position:
               
chr12:3211831-3212221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 159
               

               
Conread position:
               
19-410
               

               
Cow position:
               
chr12:22571775-22572168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 183
               

               
Conread position:
               
21-365
               

               
Cow position:
               
chr12:35718542-35718203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
48, 138
               

               
Conread position:
               
22-307
               

               
Cow position:
               
chr12:34137609-34137318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
22-395
               

               
Cow position:
               
chr12:7977571-7977932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 138
               

               
Conread position:
               
22-427
               

               
Cow position:
               
chr12:36501429-36501022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
23-198
               

               
Cow position:
               
chr12:11498574-11498400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
52, 123
               

               
Conread position:
               
23-275
               

               
Cow position:
               
chr12:10665595-10665337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
53, 185
               

               
Conread position:
               
23-324
               

               
Cow position:
               
chr12:33112047-33112344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
23-354
               

               
Cow position:
               
chr12:15259196-15258857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 155
               

               
Conread position:
               
23-371
               

               
Cow position:
               
chr12:42602717-42602371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 185
               

               
Conread position:
               
23-385
               

               
Cow position:
               
chr12:7961042-7960697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
84, 13
               

               
Conread position:
               
23-421
               

               
Cow position:
               
chr12:3578802-3579202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 158
               

               
Conread position:
               
23-440
               

               
Cow position:
               
chr12:1774142-1773728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 72
               

               
Conread position:
               
23-469
               

               
Cow position:
               
chr12:17031124-17031577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 140
               

               
Conread position:
               
23-480
               

               
Cow position:
               
chr12:2512046-2512500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 186
               

               
Conread position:
               
24-211
               

               
Cow position:
               
chr12:28582990-28582809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
24-409
               

               
Cow position:
               
chr12:16359398-16359781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 48
               

               
Conread position:
               
25-161
               

               
Cow position:
               
chr12:41747914-41748050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
25-307
               

               
Cow position:
               
chr12:1520926-1521206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
25-410
               

               
Cow position:
               
chr12:12617869-12617482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 178
               

               
Conread position:
               
25-421
               

               
Cow position:
               
chr12:19871961-19872345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 74
               

               
Conread position:
               
25-439
               

               
Cow position:
               
chr12:16544065-16543640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 131
               

               
Conread position:
               
26-406
               

               
Cow position:
               
chr12:31228100-31228474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 130
               

               
Conread position:
               
26-410
               

               
Cow position:
               
chr12:42625851-42625463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 177
               

               
Conread position:
               
27-481
               

               
Cow position:
               
chr12:25878536-25878993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 38
               

               
Conread position:
               
27-484
               

               
Cow position:
               
chr12:16217286-16216828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 175
               

               
Conread position:
               
28-187
               

               
Cow position:
               
chr12:26782566-26782407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
28-298
               

               
Cow position:
               
chr12:24519749-24519482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
29-307
               

               
Cow position:
               
chr12:3160593-3160864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
29-383
               

               
Cow position:
               
chr12:26526907-26527260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
29-400
               

               
Cow position:
               
chr12:44274318-44273947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
29-410
               

               
Cow position:
               
chr12:24981774-24982150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
265, 173
               

               
Conread position:
               
31-209
               

               
Cow position:
               
chr12:7065401-7065579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
31-343
               

               
Cow position:
               
chr12:12263373-12263063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
31-359
               

               
Cow position:
               
chr12:41202934-41202598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
54, 174
               

               
Conread position:
               
33-321
               

               
Cow position:
               
chr12:15415550-15415271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
254, 175
               

               
Conread position:
               
34-306
               

               
Cow position:
               
chr12:13578053-13578323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
34-355
               

               
Cow position:
               
chr12:25868321-25868650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
34-362
               

               
Cow position:
               
chr12:36374808-36375137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
229, 177
               

               
Conread position:
               
34-365
               

               
Cow position:
               
chr12:15107236-15107557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
162, 67
               

               
Conread position:
               
34-384
               

               
Cow position:
               
chr12:37525005-37524647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 176
               

               
Conread position:
               
34-395
               

               
Cow position:
               
chr12:17716603-17716967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
44, 279
               

               
Conread position:
               
34-406
               

               
Cow position:
               
chr12:21486131-21486484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 24
               

               
Conread position:
               
34-406
               

               
Cow position:
               
chr12:42966530-42966899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 178
               

               
Conread position:
               
35-240
               

               
Cow position:
               
chr12:34259105-34259308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
36-197
               

               
Cow position:
               
chr12:35712615-35712454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
36-307
               

               
Cow position:
               
chr12:17098948-17099223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 182
               

               
Conread position:
               
36-384
               

               
Cow position:
               
chr12:8095491-8095141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
296, 166
               

               
Conread position:
               
36-406
               

               
Cow position:
               
chr12:44014302-44013936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 99
               

               
Conread position:
               
36-484
               

               
Cow position:
               
chr12:9840377-9840826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 166
               

               
Conread position:
               
38-410
               

               
Cow position:
               
chr12:22278813-22278439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
264, 164
               

               
Conread position:
               
38-468
               

               
Cow position:
               
chr12:2669792-2670226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
38-484
               

               
Cow position:
               
chr12:22458206-22457761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 164
               

               
Conread position:
               
39-211
               

               
Cow position:
               
chr12:26038809-26038635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
41-215
               

               
Cow position:
               
chr12:16821747-16821574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
41-221
               

               
Cow position:
               
chr12:12178082-12178263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
37, 150
               

               
Conread position:
               
41-222
               

               
Cow position:
               
chr12:23155487-23155301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
41-270
               

               
Cow position:
               
chr12:20080738-20080510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
41-292
               

               
Cow position:
               
chr12:20884347-20884609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 170
               

               
Conread position:
               
41-397
               

               
Cow position:
               
chr12:6210628-6210267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 54
               

               
Conread position:
               
41-399
               

               
Cow position:
               
chr12:20557651-20558011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
261, 161
               

               
Conread position:
               
41-433
               

               
Cow position:
               
chr12:27803513-27803123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
40, 158
               

               
Conread position:
               
41-473
               

               
Cow position:
               
chr12:30918967-30919390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 132
               

               
Conread position:
               
43-410
               

               
Cow position:
               
chr12:35537917-35537548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 159
               

               
Conread position:
               
45-183
               

               
Cow position:
               
chr12:16288811-16288672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
45-268
               

               
Cow position:
               
chr12:15204340-15204558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
45-279
               

               
Cow position:
               
chr12:8549554-8549332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
45-307
               

               
Cow position:
               
chr12:589556-589296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
45-307
               

               
Cow position:
               
chr12:35377576-35377315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
83, 164
               

               
Conread position:
               
45-385
               

               
Cow position:
               
chr12:6695989-6696330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
192, 162
               

               
Conread position:
               
45-399
               

               
Cow position:
               
chr12:18550438-18550775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
319, 67
               

               
Conread position:
               
46-268
               

               
Cow position:
               
chr12:28074080-28074295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
46-399
               

               
Cow position:
               
chr12:8076151-8075795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 117
               

               
Conread position:
               
46-410
               

               
Cow position:
               
chr12:9561603-9561237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 156
               

               
Conread position:
               
47-410
               

               
Cow position:
               
chr12:25113411-25113775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
144, 139
               

               
Conread position:
               
48-384
               

               
Cow position:
               
chr12:33297399-33297728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 166
               

               
Conread position:
               
49-307
               

               
Cow position:
               
chr12:15089036-15089295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
171, 162
               

               
Conread position:
               
49-399
               

               
Cow position:
               
chr12:10790461-10790108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
253, 153
               

               
Conread position:
               
52-189
               

               
Cow position:
               
chr12:24107906-24108043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
52-410
               

               
Cow position:
               
chr12:43601204-43600844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
261, 150
               

               
Conread position:
               
52-484
               

               
Cow position:
               
chr12:8682425-8681992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 150
               

               
Conread position:
               
53-406
               

               
Cow position:
               
chr12:34385951-34385613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 97
               

               
Conread position:
               
53-421
               

               
Cow position:
               
chr12:22047034-22047390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
31, 134
               

               
Conread position:
               
54-410
               

               
Cow position:
               
chr12:15146341-15145983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
238, 148
               

               
Conread position:
               
55-284
               

               
Cow position:
               
chr12:15160309-15160535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
52, 58
               

               
Conread position:
               
59-385
               

               
Cow position:
               
chr12:7108734-7109071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
60-331
               

               
Cow position:
               
chr12:27895221-27895488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
60-410
               

               
Cow position:
               
chr12:5153370-5153722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
249, 142
               

               
Conread position:
               
60-410
               

               
Cow position:
               
chr12:35213643-35213995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
221, 142
               

               
Conread position:
               
61-211
               

               
Cow position:
               
chr12:17708242-17708392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
62-312
               

               
Cow position:
               
chr12:38774800-38775055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
114, 156
               

               
Conread position:
               
63-220
               

               
Cow position:
               
chr12:22881396-22881545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
63-356
               

               
Cow position:
               
chr12:22132410-22132128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
63-406
               

               
Cow position:
               
chr12:29969138-29969480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 145
               

               
Conread position:
               
63-469
               

               
Cow position:
               
chr12:6489413-6489027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
341, 22
               

               
Conread position:
               
63-471
               

               
Cow position:
               
chr12:29484326-29483923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 28
               

               
Conread position:
               
64-406
               

               
Cow position:
               
chr12:35218841-35218504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 91
               

               
Conread position:
               
65-400
               

               
Cow position:
               
chr12:6719885-6720217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
129, 103
               

               
Conread position:
               
66-400
               

               
Cow position:
               
chr12:39607346-39607003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 130
               

               
Conread position:
               
67-205
               

               
Cow position:
               
chr12:3055409-3055547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
67-350
               

               
Cow position:
               
chr12:3600330-3600052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
68-386
               

               
Cow position:
               
chr12:47864751-47864423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
69-331
               

               
Cow position:
               
chr12:28812130-28812385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
69-379
               

               
Cow position:
               
chr12:40663122-40663431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
283, 139
               

               
Conread position:
               
70-384
               

               
Cow position:
               
chr12:45684452-45684138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
230, 132
               

               
Conread position:
               
70-445
               

               
Cow position:
               
chr12:38010488-38010118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
156, 116
               

               
Conread position:
               
71-356
               

               
Cow position:
               
chr12:598002-597714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
97, 137
               

               
Conread position:
               
71-468
               

               
Cow position:
               
chr12:30170229-30170629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 297
               

               
Conread position:
               
73-400
               

               
Cow position:
               
chr12:41083621-41083963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
136, 186
               

               
Conread position:
               
73-474
               

               
Cow position:
               
chr12:38041184-38040792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 84
               

               
Conread position:
               
74-307
               

               
Cow position:
               
chr12:26203439-26203664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
74-405
               

               
Cow position:
               
chr12:7147251-7147582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
218, 11
               

               
Conread position:
               
75-410
               

               
Cow position:
               
chr12:3429581-3429244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
234, 127
               

               
Conread position:
               
75-410
               

               
Cow position:
               
chr12:4018946-4019278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
234, 111
               

               
Conread position:
               
76-307
               

               
Cow position:
               
chr12:21715057-21714834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
142, 110
               

               
Conread position:
               
76-355
               

               
Cow position:
               
chr12:10847045-10846768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 6
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr12:24448060-24448383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
237, 126
               

               
Conread position:
               
77-301
               

               
Cow position:
               
chr12:6461891-6461673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
77-385
               

               
Cow position:
               
chr12:7882135-7881837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
255, 114
               

               
Conread position:
               
78-230
               

               
Cow position:
               
chr12:34343058-34343208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
78-323
               

               
Cow position:
               
chr12:7206030-7205788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
78-354
               

               
Cow position:
               
chr12:45555843-45555569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
184, 116
               

               
Conread position:
               
78-474
               

               
Cow position:
               
chr12:4370808-4371201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
83-288
               

               
Cow position:
               
chr12:46713975-46714174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
84-410
               

               
Cow position:
               
chr12:45635613-45635940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
218, 21
               

               
Conread position:
               
86-406
               

               
Cow position:
               
chr12:21314604-21314923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 122
               

               
Conread position:
               
88-406
               

               
Cow position:
               
chr12:3880669-3880352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 29
               

               
Conread position:
               
88-468
               

               
Cow position:
               
chr12:25312793-25312408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
208, 126
               

               
Conread position:
               
89-364
               

               
Cow position:
               
chr12:30605558-30605295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
227, 67
               

               
Conread position:
               
89-406
               

               
Cow position:
               
chr12:44596229-44595911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
149, 125
               

               
Conread position:
               
89-433
               

               
Cow position:
               
chr12:35807268-35807610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
5, 73
               

               
Conread position:
               
90-355
               

               
Cow position:
               
chr12:794129-794399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
103, 23
               

               
Conread position:
               
90-476
               

               
Cow position:
               
chr12:22516150-22515764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 118
               

               
Conread position:
               
91-209
               

               
Cow position:
               
chr12:2787098-2787215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
91-221
               

               
Cow position:
               
chr12:20777862-20777734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
91-274
               

               
Cow position:
               
chr12:16197761-16197579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
168, 14
               

               
Conread position:
               
91-298
               

               
Cow position:
               
chr12:25605862-25605657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
73, 91
               

               
Conread position:
               
91-307
               

               
Cow position:
               
chr12:21883154-21882940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
91-365
               

               
Cow position:
               
chr12:4656984-4656714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
91-365
               

               
Cow position:
               
chr12:23921861-23921584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
211, 111
               

               
Conread position:
               
91-384
               

               
Cow position:
               
chr12:39176775-39177071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
209, 111
               

               
Conread position:
               
91-399
               

               
Cow position:
               
chr12:37080956-37080645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
211, 111
               

               
Conread position:
               
91-399
               

               
Cow position:
               
chr12:37906451-37906140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
211, 111
               

               
Conread position:
               
91-399
               

               
Cow position:
               
chr12:43036450-43036137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
199, 111
               

               
Conread position:
               
91-408
               

               
Cow position:
               
chr12:25988029-25987710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
142, 108
               

               
Conread position:
               
91-410
               

               
Cow position:
               
chr12:3436032-3436353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 117
               

               
Conread position:
               
91-410
               

               
Cow position:
               
chr12:44005749-44005428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
222, 111
               

               
Conread position:
               
91-410
               

               
Cow position:
               
chr12:45802112-45801807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 117
               

               
Conread position:
               
91-416
               

               
Cow position:
               
chr12:24046348-24046023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
190, 8
               

               
Conread position:
               
91-421
               

               
Cow position:
               
chr12:40158649-40158320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 95
               

               
Conread position:
               
91-484
               

               
Cow position:
               
chr12:2199029-2198633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
66, 112
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr12:1398201-1398471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr12:35304734-35305005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 183
               

               
Conread position:
               
92-398
               

               
Cow position:
               
chr12:42181550-42181246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 93
               

               
Conread position:
               
92-399
               

               
Cow position:
               
chr12:14802720-14803030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
210, 110
               

               
Conread position:
               
92-405
               

               
Cow position:
               
chr12:10838397-10838711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
207, 14
               

               
Conread position:
               
92-406
               

               
Cow position:
               
chr12:42254249-42254567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 93
               

               
Conread position:
               
92-409
               

               
Cow position:
               
chr12:7310996-7311299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
162, 119
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chr12:24558927-24559315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 132
               

               
Conread position:
               
95-289
               

               
Cow position:
               
chr12:45679722-45679914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
95-308
               

               
Cow position:
               
chr12:37095548-37095759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
59, 104
               

               
Conread position:
               
95-385
               

               
Cow position:
               
chr12:39486024-39486312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 59
               

               
Conread position:
               
95-405
               

               
Cow position:
               
chr12:19508978-19508666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 99
               

               
Conread position:
               
95-405
               

               
Cow position:
               
chr12:36969709-36969397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
9, 98
               

               
Conread position:
               
95-409
               

               
Cow position:
               
chr12:6240898-6241215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 272
               

               
Conread position:
               
95-410
               

               
Cow position:
               
chr12:34104737-34105051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
236, 111
               

               
Conread position:
               
95-468
               

               
Cow position:
               
chr12:4116103-4116449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
269, 21
               

               
Conread position:
               
96-307
               

               
Cow position:
               
chr12:13018197-13017989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
99, 93
               

               
Conread position:
               
97-410
               

               
Cow position:
               
chr12:3220712-3220397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
212, 105
               

               
Conread position:
               
98-307
               

               
Cow position:
               
chr12:38832598-38832391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
98-412
               

               
Cow position:
               
chr12:46700795-46701113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
183, 10
               

               
Conread position:
               
99-306
               

               
Cow position:
               
chr12:14970573-14970370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
100-231
               

               
Cow position:
               
chr12:29071357-29071491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
104, 71
               

               
Conread position:
               
100-406
               

               
Cow position:
               
chr12:20326371-20326674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 63
               

               
Conread position:
               
100-410
               

               
Cow position:
               
chr12:45814668-45814355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 108
               

               
Conread position:
               
101-467
               

               
Cow position:
               
chr12:1245891-1246262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
102-307
               

               
Cow position:
               
chr12:22740347-22740144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
105-244
               

               
Cow position:
               
chr12:37094515-37094652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
105-248
               

               
Cow position:
               
chr12:22453710-22453850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
105-406
               

               
Cow position:
               
chr12:30753327-30753623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
81, 95
               

               
Conread position:
               
106-406
               

               
Cow position:
               
chr12:1848951-1848634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
107-410
               

               
Cow position:
               
chr12:30224367-30224064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
135, 95
               

               
Conread position:
               
108-395
               

               
Cow position:
               
chr12:31532809-31532519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
104, 145
               

               
Conread position:
               
108-402
               

               
Cow position:
               
chr12:7919670-7919944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 101
               

               
Conread position:
               
108-410
               

               
Cow position:
               
chr12:30596070-30596372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
201, 78
               

               
Conread position:
               
109-307
               

               
Cow position:
               
chr12:27035821-27035625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
109-354
               

               
Cow position:
               
chr12:36313471-36313709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
221, 102
               

               
Conread position:
               
109-356
               

               
Cow position:
               
chr12:22124625-22124862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
109-399
               

               
Cow position:
               
chr12:31959499-31959786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
146, 48
               

               
Conread position:
               
109-400
               

               
Cow position:
               
chr12:28011294-28011005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
109-421
               

               
Cow position:
               
chr12:30437856-30438159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 99
               

               
Conread position:
               
109-476
               

               
Cow position:
               
chr12:41216667-41217034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
173, 77
               

               
Conread position:
               
109-484
               

               
Cow position:
               
chr12:7449367-7449743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
172, 91
               

               
Conread position:
               
111-234
               

               
Cow position:
               
chr12:19793344-19793226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
112-274
               

               
Cow position:
               
chr12:36715515-36715355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
112-303
               

               
Cow position:
               
chr12:15121950-15122133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
112-355
               

               
Cow position:
               
chr12:2019616-2019860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
185, 88
               

               
Conread position:
               
112-385
               

               
Cow position:
               
chr12:29763001-29762716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
88, 136
               

               
Conread position:
               
112-399
               

               
Cow position:
               
chr12:10895940-10895657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 95
               

               
Conread position:
               
113-320
               

               
Cow position:
               
chr12:15429991-15429786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
113-353
               

               
Cow position:
               
chr12:7464470-7464233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
114-308
               

               
Cow position:
               
chr12:5901410-5901603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
119, 96
               

               
Conread position:
               
114-363
               

               
Cow position:
               
chr12:32987307-32987547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
129, 60
               

               
Conread position:
               
114-364
               

               
Cow position:
               
chr12:7416549-7416806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 147
               

               
Conread position:
               
114-406
               

               
Cow position:
               
chr12:3568560-3568845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
230, 72
               

               
Conread position:
               
114-410
               

               
Cow position:
               
chr12:936245-936543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
188, 93
               

               
Conread position:
               
114-468
               

               
Cow position:
               
chr12:5632264-5631919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
252, 97
               

               
Conread position:
               
115-341
               

               
Cow position:
               
chr12:30946440-30946666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
116-246
               

               
Cow position:
               
chr12:26871600-26871472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
117-410
               

               
Cow position:
               
chr12:41737415-41737708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
174, 87
               

               
Conread position:
               
120-294
               

               
Cow position:
               
chr12:19514699-19514524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 60
               

               
Conread position:
               
120-400
               

               
Cow position:
               
chr12:17000878-17001156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
181, 81
               

               
Conread position:
               
120-411
               

               
Cow position:
               
chr12:5863195-5863470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
121-327
               

               
Cow position:
               
chr12:13161549-13161752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
121-410
               

               
Cow position:
               
chr12:22693184-22692893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
188, 81
               

               
Conread position:
               
124-354
               

               
Cow position:
               
chr12:21903219-21902987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
185, 77
               

               
Conread position:
               
124-410
               

               
Cow position:
               
chr12:43584013-43583729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
228, 81
               

               
Conread position:
               
125-405
               

               
Cow position:
               
chr12:14355345-14355060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
156, 83
               

               
Conread position:
               
125-440
               

               
Cow position:
               
chr12:25560992-25561307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 87
               

               
Conread position:
               
129-408
               

               
Cow position:
               
chr12:3049810-3049529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 80
               

               
Conread position:
               
131-307
               

               
Cow position:
               
chr12:42351718-42351892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
131-358
               

               
Cow position:
               
chr12:39502034-39502261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
64, 82
               

               
Conread position:
               
131-362
               

               
Cow position:
               
chr12:12304031-12304246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
131-416
               

               
Cow position:
               
chr12:4914174-4913885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
161, 76
               

               
Conread position:
               
131-423
               

               
Cow position:
               
chr12:21393325-21393627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
109, 84
               

               
Conread position:
               
131-467
               

               
Cow position:
               
chr12:8869273-8868917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
63, 103
               

               
Conread position:
               
133-307
               

               
Cow position:
               
chr12:18588243-18588410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
133-405
               

               
Cow position:
               
chr12:31060350-31060073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
165, 17
               

               
Conread position:
               
137-356
               

               
Cow position:
               
chr12:27039130-27038915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
161, 60
               

               
Conread position:
               
137-398
               

               
Cow position:
               
chr12:47803788-47804046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
115, 74
               

               
Conread position:
               
137-440
               

               
Cow position:
               
chr12:17881505-17881798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
222, 70
               

               
Conread position:
               
138-357
               

               
Cow position:
               
chr12:29119534-29119750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
139-400
               

               
Cow position:
               
chr12:6698413-6698676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
148, 141
               

               
Conread position:
               
141-279
               

               
Cow position:
               
chr12:11590378-11590515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
142-399
               

               
Cow position:
               
chr12:18577486-18577739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
143-365
               

               
Cow position:
               
chr12:32036458-32036682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
159, 64
               

               
Conread position:
               
148-354
               

               
Cow position:
               
chr12:27123258-27123052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
152, 33
               

               
Conread position:
               
148-457
               

               
Cow position:
               
chr12:43791927-43791606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
47, 38
               

               
Conread position:
               
149-355
               

               
Cow position:
               
chr12:27987223-27987426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
143, 37
               

               
Conread position:
               
149-438
               

               
Cow position:
               
chr12:33323853-33323560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
173, 60
               

               
Conread position:
               
149-477
               

               
Cow position:
               
chr12:23440893-23440565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
152, 58
               

               
Conread position:
               
151-410
               

               
Cow position:
               
chr12:18020499-18020760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
88, 59
               

               
Conread position:
               
153-391
               

               
Cow position:
               
chr12:12976537-12976292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
131, 54
               

               
Conread position:
               
154-406
               

               
Cow position:
               
chr12:18076186-18076434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
202, 38
               

               
Conread position:
               
154-418
               

               
Cow position:
               
chr12:41979649-41979383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
144, 57
               

               
Conread position:
               
155-410
               

               
Cow position:
               
chr12:20377206-20377463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
174, 56
               

               
Conread position:
               
157-307
               

               
Cow position:
               
chr12:28789548-28789696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
157-364
               

               
Cow position:
               
chr12:4342068-4341866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
82, 50
               

               
Conread position:
               
157-400
               

               
Cow position:
               
chr12:13008119-13007878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
172, 11
               

               
Conread position:
               
157-410
               

               
Cow position:
               
chr12:9710552-9710306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
201, 47
               

               
Conread position:
               
157-468
               

               
Cow position:
               
chr12:2812880-2813187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
148, 51
               

               
Conread position:
               
158-300
               

               
Cow position:
               
chr12:38023686-38023543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
159-440
               

               
Cow position:
               
chr12:2805389-2805112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
142, 73
               

               
Conread position:
               
161-353
               

               
Cow position:
               
chr12:1343439-1343255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
153, 46
               

               
Conread position:
               
162-403
               

               
Cow position:
               
chr12:18572295-18572539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
81, 42
               

               
Conread position:
               
162-433
               

               
Cow position:
               
chr12:1223684-1223413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
195, 39
               

               
Conread position:
               
162-433
               

               
Cow position:
               
chr12:16851350-16851079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
138, 52
               

               
Conread position:
               
170-400
               

               
Cow position:
               
chr12:22261148-22260930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
63, 31
               

               
Conread position:
               
170-421
               

               
Cow position:
               
chr12:46143488-46143742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
188, 24
               

               
Conread position:
               
172-384
               

               
Cow position:
               
chr12:6136912-6136700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
149, 27
               

               
Conread position:
               
173-395
               

               
Cow position:
               
chr12:9465791-9465565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
175-418
               

               
Cow position:
               
chr12:12199234-12198987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
113, 36
               

               
Conread position:
               
177-405
               

               
Cow position:
               
chr12:34148678-34148450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
146, 34
               

               
Conread position:
               
177-416
               

               
Cow position:
               
chr12:31925327-31925558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
178, 24
               

               
Conread position:
               
178-396
               

               
Cow position:
               
chr12:9229810-9229592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
178, 186
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr12:35136195-35136369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
114, 31
               

               
Conread position:
               
180-406
               

               
Cow position:
               
chr12:44905313-44905543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
181-301
               

               
Cow position:
               
chr12:43192509-43192391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
182-364
               

               
Cow position:
               
chr12:37481452-37481283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
178, 25
               

               
Conread position:
               
184-408
               

               
Cow position:
               
chr12:5134819-5135047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
185-420
               

               
Cow position:
               
chr12:43788711-43788954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
120, 14
               

               
Conread position:
               
186-304
               

               
Cow position:
               
chr12:4719268-4719384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
186-468
               

               
Cow position:
               
chr12:44622039-44622315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
173, 107
               

               
Conread position:
               
187-409
               

               
Cow position:
               
chr12:29995779-29995557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
187-477
               

               
Cow position:
               
chr12:941313-941609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
189-421
               

               
Cow position:
               
chr12:12017559-12017796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
189-472
               

               
Cow position:
               
chr12:26782566-26782848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
189-476
               

               
Cow position:
               
chr12:30745398-30745691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
116, 22
               

               
Conread position:
               
191-313
               

               
Cow position:
               
chr12:45065521-45065641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
193-468
               

               
Cow position:
               
chr12:18518360-18518633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
162, 18
               

               
Conread position:
               
194-429
               

               
Cow position:
               
chr12:30728550-30728310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
196-476
               

               
Cow position:
               
chr12:3055824-3056101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 167
               

               
Conread position:
               
197-432
               

               
Cow position:
               
chr12:28650648-28650884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
101, 36
               

               
Conread position:
               
198-298
               

               
Cow position:
               
chr12:19912008-19912107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
198-353
               

               
Cow position:
               
chr12:25529722-25529881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
198-355
               

               
Cow position:
               
chr12:30590467-30590629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
198-395
               

               
Cow position:
               
chr12:8943528-8943329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 74
               

               
Conread position:
               
198-406
               

               
Cow position:
               
chr12:27563145-27562929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
198-432
               

               
Cow position:
               
chr12:41473788-41474016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
161, 9
               

               
Conread position:
               
198-440
               

               
Cow position:
               
chr12:32391537-32391785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
142, 240
               

               
Conread position:
               
198-468
               

               
Cow position:
               
chr12:29411792-29411529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
134, 30
               

               
Conread position:
               
199-353
               

               
Cow position:
               
chr12:14132052-14131893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
199-353
               

               
Cow position:
               
chr12:37270595-37270747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
199-385
               

               
Cow position:
               
chr12:21922129-21922316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
137, 32
               

               
Conread position:
               
199-400
               

               
Cow position:
               
chr12:6687562-6687756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
199-406
               

               
Cow position:
               
chr12:24032699-24032906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
158, 125
               

               
Conread position:
               
199-416
               

               
Cow position:
               
chr12:17708408-17708634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
199-468
               

               
Cow position:
               
chr12:25455807-25456079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 234
               

               
Conread position:
               
199-468
               

               
Cow position:
               
chr12:48415818-48415552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
185, 39
               

               
Conread position:
               
200-421
               

               
Cow position:
               
chr12:6411034-6410816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
159, 120
               

               
Conread position:
               
201-387
               

               
Cow position:
               
chr12:17495497-17495309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
201-402
               

               
Cow position:
               
chr12:3076928-3076720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
201-404
               

               
Cow position:
               
chr12:46635250-46635046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
201-405
               

               
Cow position:
               
chr12:40307391-40307597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
108, 152
               

               
Conread position:
               
201-406
               

               
Cow position:
               
chr12:37994030-37993823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
201-441
               

               
Cow position:
               
chr12:30805550-30805792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
44, 110
               

               
Conread position:
               
202-355
               

               
Cow position:
               
chr12:4866512-4866663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
202-421
               

               
Cow position:
               
chr12:1284762-1284542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
121, 106
               

               
Conread position:
               
202-480
               

               
Cow position:
               
chr12:44518043-44517767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
203-468
               

               
Cow position:
               
chr12:18769379-18769110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
21, 163
               

               
Conread position:
               
204-405
               

               
Cow position:
               
chr12:42167344-42167547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
132, 42
               

               
Conread position:
               
205-393
               

               
Cow position:
               
chr12:36954676-36954487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
207-406
               

               
Cow position:
               
chr12:3510266-3510467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 32
               

               
Conread position:
               
208-397
               

               
Cow position:
               
chr12:25805408-25805219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
156, 137
               

               
Conread position:
               
208-400
               

               
Cow position:
               
chr12:40270384-40270198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
142, 78
               

               
Conread position:
               
208-466
               

               
Cow position:
               
chr12:26317161-26317423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 86
               

               
Conread position:
               
208-468
               

               
Cow position:
               
chr12:5714331-5714590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
147, 31
               

               
Conread position:
               
209-440
               

               
Cow position:
               
chr12:5905760-5905992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
198, 127
               

               
Conread position:
               
210-433
               

               
Cow position:
               
chr12:18081839-18081620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
175, 96
               

               
Conread position:
               
210-467
               

               
Cow position:
               
chr12:41091233-41091492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 197
               

               
Conread position:
               
210-468
               

               
Cow position:
               
chr12:20777225-20776961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
211-354
               

               
Cow position:
               
chr12:20795612-20795755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
211-400
               

               
Cow position:
               
chr12:34007004-34007199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
90, 186
               

               
Conread position:
               
211-405
               

               
Cow position:
               
chr12:18040887-18040697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
211-475
               

               
Cow position:
               
chr12:9914494-9914756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
212-372
               

               
Cow position:
               
chr12:17486431-17486269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
117, 123
               

               
Conread position:
               
214-411
               

               
Cow position:
               
chr12:11109478-11109670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
136, 16
               

               
Conread position:
               
215-421
               

               
Cow position:
               
chr12:32169245-32169457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
216-400
               

               
Cow position:
               
chr12:4134375-4134565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
216-410
               

               
Cow position:
               
chr12:15358038-15358236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
93, 190
               

               
Conread position:
               
217-410
               

               
Cow position:
               
chr12:32714752-32714947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
22, 137
               

               
Conread position:
               
217-440
               

               
Cow position:
               
chr12:40110100-40110320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 90
               

               
Conread position:
               
219-399
               

               
Cow position:
               
chr12:23154753-23154569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
219-413
               

               
Cow position:
               
chr12:12178634-12178828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
102, 133
               

               
Conread position:
               
221-307
               

               
Cow position:
               
chr12:22285385-22285300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
87
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
221-385
               

               
Cow position:
               
chr12:41214603-41214443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
138, 18
               

               
Conread position:
               
222-385
               

               
Cow position:
               
chr12:8922073-8921904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
222-399
               

               
Cow position:
               
chr12:19502704-19502523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 127
               

               
Conread position:
               
222-421
               

               
Cow position:
               
chr12:18388566-18388370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
133, 142
               

               
Conread position:
               
225-434
               

               
Cow position:
               
chr12:25320642-25320852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
183, 97
               

               
Conread position:
               
228-406
               

               
Cow position:
               
chr12:44846115-44846289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
58, 65
               

               
Conread position:
               
230-439
               

               
Cow position:
               
chr12:30662226-30662013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
235-410
               

               
Cow position:
               
chr12:8710560-8710729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
128, 81
               

               
Conread position:
               
238-465
               

               
Cow position:
               
chr12:17702501-17702269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 211
               

               
Conread position:
               
244-406
               

               
Cow position:
               
chr12:29162073-29161913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
120, 89
               

               
Conread position:
               
250-446
               

               
Cow position:
               
chr12:15240980-15240779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 114
               

               
Conread position:
               
252-440
               

               
Cow position:
               
chr12:5635702-5635513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 100
               

               
Conread position:
               
262-468
               

               
Cow position:
               
chr12:29770817-29770612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
105, 97
               

               
Conread position:
               
270-406
               

               
Cow position:
               
chr12:15162914-15163050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.