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Cow genome map

           
Conread name:
           
Ss1.1-unkn-MI-P-NA-afr-a-10-1-UM.s1.3
        

               
Conread position:
               
1-127
               

               
Cow position:
               
chr24:12331864-12331739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr24:15692252-15692385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr24:20225356-20225223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr24:31357372-31357514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr24:34314638-34314780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr24:25543369-25543227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr24:26387950-26387803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr24:17752409-17752258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
147, 86
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr24:34396629-34396468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr24:40497889-40497723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr24:28290052-28289868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr24:31816066-31816251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr24:31293843-31293664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr24:18604696-18604884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr24:8886394-8886595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr24:25424521-25424712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr24:28144313-28144121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
173, 16
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr24:28601219-28601022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr24:17833937-17833734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr24:7744102-7744304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr24:43200805-43200604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr24:144508-144305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr24:36800900-36801098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr24:10243719-10243514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr24:33052786-33052582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr24:34761350-34761555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr24:44877343-44877549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr24:45004441-45004647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
196, 16
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr24:40184085-40184300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr24:17294872-17294647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr24:17566688-17566902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr24:17491416-17491636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr24:13373665-13373429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 16
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr24:16962810-16962570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr24:39217113-39216877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr24:44989114-44988874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr24:31758458-31758229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
238, 15
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr24:16897333-16897087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr24:36219940-36220190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
78, 176
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr24:23486504-23486765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr24:33291660-33291400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr24:16056027-16055746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr24:27484696-27484420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 170
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr24:16646088-16645811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr24:15372631-15372917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr24:16072351-16072639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr24:31420401-31420689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr24:17763760-17763446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 180
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr24:6157787-6157493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr24:13117475-13117771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr24:35066952-35066655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr24:37480798-37480490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
83, 113
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr24:31770321-31770631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
110, 247
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr24:2300282-2300584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr24:6154342-6154638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr24:12090815-12091118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 15
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr24:12198515-12198209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
22, 106
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr24:17030067-17029766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr24:17544120-17543817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr24:18839800-18839505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
128, 9
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr24:19679384-19679687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr24:19837011-19837313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr24:19886070-19886372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr24:21769961-21770265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr24:27754204-27754509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr24:29073165-29072863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr24:31308939-31309236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr24:32854051-32854353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr24:38655583-38655277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr24:16232748-16232428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr24:33138474-33138779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr24:42249438-42249136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr24:43507000-43506695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr24:15793173-15792861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr24:32405541-32405224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr24:40149555-40149241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 15
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr24:5652453-5652138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr24:14378659-14378330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
297, 15
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr24:33938697-33939036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 16
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr24:4616234-4615899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr24:12503906-12504243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
313, 16
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr24:12348574-12348912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
21, 200
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr24:36722242-36722583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 0
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr24:22187601-22187261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr24:33372070-33372414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
84, 179
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr24:38588621-38588971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 16
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr24:28067272-28067622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr24:30262834-30263190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr24:32455941-32456293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 15
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr24:11839691-11840042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 0
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr24:13304658-13304307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr24:18075645-18076015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr24:20283369-20283014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
244, 16
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr24:23052055-23051704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 16
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr24:23184527-23184167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr24:24002490-24002843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 16
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr24:30768230-30768579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr24:38593158-38593517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 16
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr24:12191468-12191835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 110
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr24:25269486-25269116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr24:28689228-28689579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr24:32213158-32212778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 20
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr24:40974507-40974886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
193, 16
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr24:29375851-29376219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
297, 16
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr24:12146747-12146367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
320, 101
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr24:12508008-12508389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
297, 20
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr24:13173644-13173257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 16
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr24:18222652-18222266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 14
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr24:6665965-6665585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
185, 16
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr24:8814498-8814102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 88
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr24:22193238-22193625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 16
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr24:18732599-18732219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 13
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr24:24137339-24136953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 15
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr24:27845008-27844617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 20
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr24:2118713-2119113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 16
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr24:30870131-30869739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 16
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr24:32370406-32370011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 204
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr24:39238310-39238709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 16
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr24:11940876-11941275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 16
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr24:17105052-17104664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr24:18742058-18741662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 16
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr24:27905940-27906348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 16
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr24:6413315-6413724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr24:16558171-16557765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 16
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr24:35823085-35822679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 16
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr24:40466572-40466166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 201
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr24:29596294-29595896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 16
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr24:31323800-31324196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 16
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr24:32359302-32358903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
280, 20
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr24:33239040-33238628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr24:39441045-39440640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 16
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr24:43432292-43432707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr24:5849899-5849482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr24:17406910-17407304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 15
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr24:32823291-32822862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr24:6035337-6034935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
280, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr24:7030637-7030238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr24:9550101-9550511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr24:12701242-12700832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr24:16541332-16540937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr24:29191126-29191526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr24:32361015-32360604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 20
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr24:36780259-36780661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 16
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr24:21264990-21264590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 16
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr24:33985502-33985085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 16
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr24:13625819-13626213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
233, 16
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr24:32693217-32693634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 16
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr24:6149545-6149954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
364, 16
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr24:27270308-27270714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 16
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr24:18374305-18374710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr24:38814484-38814905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 186
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr24:14279400-14279835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 15
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr24:28721399-28721835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 16
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr24:7001556-7001117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 16
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr24:28062460-28062900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 15
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr24:35571999-35572434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 16
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr24:35675067-35675493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr24:39492815-39493244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 16
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr24:36555316-36554886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
382, 16
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr24:6340545-6340962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 13
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr24:27052977-27052543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 14
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr24:27720235-27719804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
407, 16
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr24:30484422-30483999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
365, 16
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr24:17309586-17309161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 20
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr24:16557141-16556667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 15
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr24:15247108-15246672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 16
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr24:24250236-24250703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 16
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr24:202121-201663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 16
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr24:11876394-11876862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr24:11886676-11887134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 16
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr24:17364139-17363674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 16
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr24:31811700-31812163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 16
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr24:43634944-43635412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 16
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr24:19815571-19815097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 15
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr24:6141444-6140971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 20
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr24:33943914-33944381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 20
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr24:19466419-19465935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 19
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr24:20024124-20024595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 11
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr24:39160029-39159564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 16
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr24:6160572-6160100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
364, 16
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr24:11215545-11215062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 20
               

               
Conread position:
               
2-142
               

               
Cow position:
               
chr24:13542344-13542205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-152
               

               
Cow position:
               
chr24:19406645-19406496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-163
               

               
Cow position:
               
chr24:13497144-13497303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-169
               

               
Cow position:
               
chr24:8003164-8003330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr24:27632902-27633101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr24:17864927-17864727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr24:37984833-37984631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr24:18234618-18234834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr24:18399602-18399389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr24:34603005-34603226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
2-225
               

               
Cow position:
               
chr24:35815640-35815420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr24:13890799-13890568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr24:14530877-14531107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr24:4649434-4649199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr24:14353189-14353424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr24:14760742-14760977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr24:16654161-16653926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr24:26795260-26795495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr24:40789751-40789516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr24:2203207-2202931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr24:3851439-3851740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr24:6067503-6067204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr24:13236110-13236414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
24, 169
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr24:13319611-13319310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr24:16844822-16844517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr24:17188428-17188126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr24:22047230-22046928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr24:27153809-27153507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr24:33639654-33639353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr24:18740525-18740216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 15
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr24:9901215-9901540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 14
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr24:27763316-27763647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 15
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr24:40840287-40840628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-355
               

               
Cow position:
               
chr24:18379157-18378805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr24:16610936-16610582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 14
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr24:39900805-39900458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
2-359
               

               
Cow position:
               
chr24:24818752-24818399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
260, 15
               

               
Conread position:
               
2-359
               

               
Cow position:
               
chr24:38479432-38479104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
281, 14
               

               
Conread position:
               
2-361
               

               
Cow position:
               
chr24:12696280-12695920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-364
               

               
Cow position:
               
chr24:29845750-29845398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr24:13042149-13041784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-376
               

               
Cow position:
               
chr24:9616446-9616084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-377
               

               
Cow position:
               
chr24:11152193-11152570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr24:11311681-11311295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 15
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr24:38296900-38297284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr24:42693895-42693511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr24:13185850-13185456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr24:4666924-4667322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr24:8776819-8777217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr24:9044853-9044454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr24:17455891-17456290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr24:27760365-27760764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr24:39253768-39254167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-405
               

               
Cow position:
               
chr24:11118800-11119198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr24:5990344-5989937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 15
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr24:30545372-30544945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr24:12577524-12577926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr24:14146031-14145635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:192930-193336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:207162-206756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:1841027-1840618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:3163314-3163722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:5929622-5930030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 19
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:6019127-6018718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:6020235-6019828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:6436306-6436712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:7596719-7596311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:7782287-7781878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:7986372-7985963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:8331654-8331256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:9365957-9365548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:10035200-10034791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:10655456-10655864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 14
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:11080939-11080544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:11104308-11103895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:12293536-12293946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 200
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:12447335-12447730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:13178902-13178493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:14124603-14125013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
243, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:14249739-14249330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 19
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:15026599-15026190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:15296959-15297367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:15810318-15809909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 20
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:15880930-15881338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:17161134-17160725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:17720581-17720175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:18113300-18113709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:19707066-19707486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:20221033-20221438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:20368410-20368816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 14
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:20604592-20605002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:22795399-22795804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:25372946-25373355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:25710195-25709771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
163, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:28494587-28494996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:28833018-28832609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:29083815-29083405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
190, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:29097629-29097221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 20
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:31067211-31066806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:35793692-35794103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:36027671-36027261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
231, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:36174262-36173864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 141
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:36308420-36308829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:36326201-36326610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:39067019-39066610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:43906702-43907107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-418
               

               
Cow position:
               
chr24:15084423-15084842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 15
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr24:40129633-40130059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 46
               

               
Conread position:
               
2-428
               

               
Cow position:
               
chr24:27683936-27683507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
48, 179
               

               
Conread position:
               
2-450
               

               
Cow position:
               
chr24:6325528-6325078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr24:599849-599369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr24:4637576-4637098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr24:8754359-8754836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr24:12377273-12376792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr24:12518657-12519137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr24:13492339-13492823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr24:21211074-21210593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr24:35877417-35876938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr24:40381994-40381514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr24:40427848-40427373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr24:41063301-41063497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr24:16401586-16401378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr24:27747928-27748136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr24:3512804-3512546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-297
               

               
Cow position:
               
chr24:24583283-24582986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
3-297
               

               
Cow position:
               
chr24:39913929-39914216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr24:26412891-26413185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr24:3515683-3515389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr24:8021080-8021392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
3-341
               

               
Cow position:
               
chr24:43693241-43692894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
8, 129
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr24:23616209-23616556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr24:36715069-36715418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
230, 14
               

               
Conread position:
               
3-401
               

               
Cow position:
               
chr24:17412260-17412641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr24:40518768-40518370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
108, 14
               

               
Conread position:
               
3-449
               

               
Cow position:
               
chr24:26846770-26846318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
3-468
               

               
Cow position:
               
chr24:27290392-27290845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 5
               

               
Conread position:
               
3-473
               

               
Cow position:
               
chr24:29064129-29063671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 14
               

               
Conread position:
               
3-484
               

               
Cow position:
               
chr24:25677541-25678031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
4-193
               

               
Cow position:
               
chr24:40206358-40206545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
4-329
               

               
Cow position:
               
chr24:37037129-37037451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 13
               

               
Conread position:
               
4-355
               

               
Cow position:
               
chr24:37386849-37386484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
4-374
               

               
Cow position:
               
chr24:35503141-35502775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
4-384
               

               
Cow position:
               
chr24:13819453-13819836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 206
               

               
Conread position:
               
4-405
               

               
Cow position:
               
chr24:40035249-40034848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 13
               

               
Conread position:
               
4-409
               

               
Cow position:
               
chr24:37142153-37142559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 13
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr24:39729904-39729496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 13
               

               
Conread position:
               
4-473
               

               
Cow position:
               
chr24:34271034-34271503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 198
               

               
Conread position:
               
5-163
               

               
Cow position:
               
chr24:12202663-12202502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr24:37946334-37946136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr24:23695408-23695204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr24:40771634-40771865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
202, 110
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr24:25245548-25245920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
5-386
               

               
Cow position:
               
chr24:28303834-28303459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
359, 16
               

               
Conread position:
               
5-399
               

               
Cow position:
               
chr24:29679790-29679396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr24:6443283-6443685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr24:16909145-16909575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr24:18025448-18025009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 12
               

               
Conread position:
               
5-475
               

               
Cow position:
               
chr24:18266646-18266181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 10
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr24:27503069-27502690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 202
               

               
Conread position:
               
7-191
               

               
Cow position:
               
chr24:35872409-35872224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
7-240
               

               
Cow position:
               
chr24:41670754-41670527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
7-400
               

               
Cow position:
               
chr24:2993411-2993016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
8-246
               

               
Cow position:
               
chr24:16996428-16996669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
8-279
               

               
Cow position:
               
chr24:29360458-29360194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr24:33518473-33518187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
8-298
               

               
Cow position:
               
chr24:38444378-38444663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
108, 9
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr24:29759885-29760174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
8-345
               

               
Cow position:
               
chr24:24025158-24025497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
80, 64
               

               
Conread position:
               
8-353
               

               
Cow position:
               
chr24:15666889-15666545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
8-355
               

               
Cow position:
               
chr24:32158755-32158409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
8-399
               

               
Cow position:
               
chr24:28336023-28335640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
78, 148
               

               
Conread position:
               
8-410
               

               
Cow position:
               
chr24:39500766-39500361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
8-421
               

               
Cow position:
               
chr24:25991644-25991230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
144, 15
               

               
Conread position:
               
8-433
               

               
Cow position:
               
chr24:39681383-39681798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
9-308
               

               
Cow position:
               
chr24:38884925-38884634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
65, 8
               

               
Conread position:
               
9-451
               

               
Cow position:
               
chr24:15919227-15919666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
201, 8
               

               
Conread position:
               
10-298
               

               
Cow position:
               
chr24:9210213-9209926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 7
               

               
Conread position:
               
10-354
               

               
Cow position:
               
chr24:14914023-14913677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
80, 140
               

               
Conread position:
               
14-397
               

               
Cow position:
               
chr24:2731055-2730664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 81
               

               
Conread position:
               
14-433
               

               
Cow position:
               
chr24:36486538-36486114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 58
               

               
Conread position:
               
16-220
               

               
Cow position:
               
chr24:18331211-18331422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
16-405
               

               
Cow position:
               
chr24:2391716-2392110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 193
               

               
Conread position:
               
17-144
               

               
Cow position:
               
chr24:27266869-27266996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-163
               

               
Cow position:
               
chr24:5279437-5279290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chr24:19782637-19782819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr24:27889380-27889192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 72
               

               
Conread position:
               
17-218
               

               
Cow position:
               
chr24:39955759-39955543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
17-288
               

               
Cow position:
               
chr24:32070189-32070466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
57, 175
               

               
Conread position:
               
17-307
               

               
Cow position:
               
chr24:17365127-17364839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
17-308
               

               
Cow position:
               
chr24:23491975-23492267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
17-318
               

               
Cow position:
               
chr24:14363553-14363254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
17-332
               

               
Cow position:
               
chr24:24455251-24455570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
58, 46
               

               
Conread position:
               
17-350
               

               
Cow position:
               
chr24:44363522-44363188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 110
               

               
Conread position:
               
17-362
               

               
Cow position:
               
chr24:18847443-18847771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
275, 125
               

               
Conread position:
               
17-363
               

               
Cow position:
               
chr24:29071561-29071210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 166
               

               
Conread position:
               
17-363
               

               
Cow position:
               
chr24:33379581-33379927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 192
               

               
Conread position:
               
17-364
               

               
Cow position:
               
chr24:11064397-11064725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
17-384
               

               
Cow position:
               
chr24:40056192-40055829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 164
               

               
Conread position:
               
17-384
               

               
Cow position:
               
chr24:45216588-45216221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 165
               

               
Conread position:
               
17-400
               

               
Cow position:
               
chr24:16267298-16267686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
74, 295
               

               
Conread position:
               
17-400
               

               
Cow position:
               
chr24:34564652-34565033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 39
               

               
Conread position:
               
17-405
               

               
Cow position:
               
chr24:31302550-31302928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 6
               

               
Conread position:
               
17-406
               

               
Cow position:
               
chr24:19475646-19476019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 135
               

               
Conread position:
               
17-406
               

               
Cow position:
               
chr24:27809706-27810101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 319
               

               
Conread position:
               
17-410
               

               
Cow position:
               
chr24:33230194-33230593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 35
               

               
Conread position:
               
17-440
               

               
Cow position:
               
chr24:5141459-5141895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 228
               

               
Conread position:
               
17-440
               

               
Cow position:
               
chr24:28554031-28553600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 238
               

               
Conread position:
               
17-449
               

               
Cow position:
               
chr24:12234781-12234372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
73, 42
               

               
Conread position:
               
18-293
               

               
Cow position:
               
chr24:25524600-25524873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
147, 14
               

               
Conread position:
               
18-399
               

               
Cow position:
               
chr24:9070907-9070525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 190
               

               
Conread position:
               
18-408
               

               
Cow position:
               
chr24:5607601-5607222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
18-437
               

               
Cow position:
               
chr24:17955922-17955494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
59, 202
               

               
Conread position:
               
18-476
               

               
Cow position:
               
chr24:33621958-33621499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 190
               

               
Conread position:
               
19-303
               

               
Cow position:
               
chr24:27732633-27732343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
60, 89
               

               
Conread position:
               
19-384
               

               
Cow position:
               
chr24:5448544-5448169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
32, 94
               

               
Conread position:
               
19-406
               

               
Cow position:
               
chr24:11006742-11007134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 196
               

               
Conread position:
               
20-364
               

               
Cow position:
               
chr24:42908172-42907822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
77, 182
               

               
Conread position:
               
20-410
               

               
Cow position:
               
chr24:32609164-32609560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 192
               

               
Conread position:
               
22-274
               

               
Cow position:
               
chr24:26110543-26110797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
49, 82
               

               
Conread position:
               
22-307
               

               
Cow position:
               
chr24:11327219-11327502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 13
               

               
Conread position:
               
22-406
               

               
Cow position:
               
chr24:20970258-20969885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 10
               

               
Conread position:
               
22-408
               

               
Cow position:
               
chr24:5644055-5643660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 88
               

               
Conread position:
               
23-227
               

               
Cow position:
               
chr24:9087939-9087738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
23-240
               

               
Cow position:
               
chr24:39977269-39977052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
12, 187
               

               
Conread position:
               
23-306
               

               
Cow position:
               
chr24:6450065-6450328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
23-384
               

               
Cow position:
               
chr24:22975667-22976034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 181
               

               
Conread position:
               
23-385
               

               
Cow position:
               
chr24:814729-814372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
23-406
               

               
Cow position:
               
chr24:39219309-39218926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 80
               

               
Conread position:
               
23-438
               

               
Cow position:
               
chr24:33098960-33098536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 185
               

               
Conread position:
               
23-468
               

               
Cow position:
               
chr24:27148939-27149373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 176
               

               
Conread position:
               
24-307
               

               
Cow position:
               
chr24:16994009-16993729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
24-356
               

               
Cow position:
               
chr24:34870333-34870014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
55, 126
               

               
Conread position:
               
24-406
               

               
Cow position:
               
chr24:3153051-3152666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 186
               

               
Conread position:
               
24-410
               

               
Cow position:
               
chr24:3794354-3794726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
25-355
               

               
Cow position:
               
chr24:33730394-33730718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 176
               

               
Conread position:
               
25-384
               

               
Cow position:
               
chr24:13872320-13872682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 177
               

               
Conread position:
               
25-398
               

               
Cow position:
               
chr24:1862032-1861656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 177
               

               
Conread position:
               
26-240
               

               
Cow position:
               
chr24:35027007-35026798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 86
               

               
Conread position:
               
26-355
               

               
Cow position:
               
chr24:38266723-38267051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
26-410
               

               
Cow position:
               
chr24:36268536-36268921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
33, 175
               

               
Conread position:
               
27-384
               

               
Cow position:
               
chr24:27593635-27593274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 174
               

               
Conread position:
               
28-184
               

               
Cow position:
               
chr24:6676665-6676821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
28-307
               

               
Cow position:
               
chr24:39769963-39769689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
249, 103
               

               
Conread position:
               
28-399
               

               
Cow position:
               
chr24:23034203-23034577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 180
               

               
Conread position:
               
28-410
               

               
Cow position:
               
chr24:38897008-38896624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 174
               

               
Conread position:
               
29-207
               

               
Cow position:
               
chr24:4695227-4695059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
29-352
               

               
Cow position:
               
chr24:37975531-37975211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 129
               

               
Conread position:
               
29-355
               

               
Cow position:
               
chr24:30766407-30766740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
61, 131
               

               
Conread position:
               
29-364
               

               
Cow position:
               
chr24:42862211-42862518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
214, 49
               

               
Conread position:
               
31-198
               

               
Cow position:
               
chr24:31256725-31256553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
31-304
               

               
Cow position:
               
chr24:6080343-6080614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
211, 174
               

               
Conread position:
               
31-385
               

               
Cow position:
               
chr24:5608410-5608765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
270, 177
               

               
Conread position:
               
31-410
               

               
Cow position:
               
chr24:25706288-25705909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
202, 34
               

               
Conread position:
               
32-439
               

               
Cow position:
               
chr24:44987831-44987428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 102
               

               
Conread position:
               
33-211
               

               
Cow position:
               
chr24:27608599-27608419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
34-207
               

               
Cow position:
               
chr24:14550214-14550041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
34-209
               

               
Cow position:
               
chr24:42381429-42381252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
34-246
               

               
Cow position:
               
chr24:33428450-33428660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
34-355
               

               
Cow position:
               
chr24:38643174-38643502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
57, 183
               

               
Conread position:
               
34-406
               

               
Cow position:
               
chr24:29170520-29170883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 157
               

               
Conread position:
               
34-476
               

               
Cow position:
               
chr24:28353703-28354137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
35-468
               

               
Cow position:
               
chr24:11734283-11734697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
281, 55
               

               
Conread position:
               
36-356
               

               
Cow position:
               
chr24:16625954-16625637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 90
               

               
Conread position:
               
36-410
               

               
Cow position:
               
chr24:12697537-12697161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 166
               

               
Conread position:
               
36-410
               

               
Cow position:
               
chr24:27852518-27852142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 166
               

               
Conread position:
               
36-411
               

               
Cow position:
               
chr24:27874152-27874520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 63
               

               
Conread position:
               
37-410
               

               
Cow position:
               
chr24:6085473-6085848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
245, 165
               

               
Conread position:
               
37-468
               

               
Cow position:
               
chr24:29673067-29673496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 58
               

               
Conread position:
               
38-329
               

               
Cow position:
               
chr24:37229937-37230227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
40, 81
               

               
Conread position:
               
39-406
               

               
Cow position:
               
chr24:7917819-7917448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 43
               

               
Conread position:
               
41-205
               

               
Cow position:
               
chr24:13512840-13512676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
41-208
               

               
Cow position:
               
chr24:4354809-4354976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
156, 145
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr24:16079932-16079740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
41-256
               

               
Cow position:
               
chr24:27039430-27039645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 160
               

               
Conread position:
               
41-257
               

               
Cow position:
               
chr24:9768004-9768220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
41-399
               

               
Cow position:
               
chr24:16475347-16475706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 31
               

               
Conread position:
               
41-410
               

               
Cow position:
               
chr24:22954422-22954793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 161
               

               
Conread position:
               
41-438
               

               
Cow position:
               
chr24:15472903-15473309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
50, 150
               

               
Conread position:
               
41-467
               

               
Cow position:
               
chr24:18485448-18485021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 44
               

               
Conread position:
               
41-484
               

               
Cow position:
               
chr24:29788407-29787963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 161
               

               
Conread position:
               
42-192
               

               
Cow position:
               
chr24:17860724-17860574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
42-400
               

               
Cow position:
               
chr24:35795718-35795367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
191, 96
               

               
Conread position:
               
45-206
               

               
Cow position:
               
chr24:19804014-19804172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
45-384
               

               
Cow position:
               
chr24:16870229-16869890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 44
               

               
Conread position:
               
45-410
               

               
Cow position:
               
chr24:38488406-38488773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
47, 41
               

               
Conread position:
               
46-307
               

               
Cow position:
               
chr24:5624668-5624417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 87
               

               
Conread position:
               
46-399
               

               
Cow position:
               
chr24:42835367-42835723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
256, 156
               

               
Conread position:
               
47-307
               

               
Cow position:
               
chr24:11748246-11747988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
47-405
               

               
Cow position:
               
chr24:21104536-21104894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
130, 135
               

               
Conread position:
               
49-248
               

               
Cow position:
               
chr24:42345498-42345311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
188, 144
               

               
Conread position:
               
49-307
               

               
Cow position:
               
chr24:8608353-8608607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
9, 131
               

               
Conread position:
               
49-342
               

               
Cow position:
               
chr24:36710700-36710991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 25
               

               
Conread position:
               
49-406
               

               
Cow position:
               
chr24:19658104-19658471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 155
               

               
Conread position:
               
53-484
               

               
Cow position:
               
chr24:10308842-10309256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
181, 59
               

               
Conread position:
               
54-406
               

               
Cow position:
               
chr24:3631081-3631423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
54-450
               

               
Cow position:
               
chr24:27185526-27185925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
248, 158
               

               
Conread position:
               
55-296
               

               
Cow position:
               
chr24:17980780-17981018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
36, 63
               

               
Conread position:
               
57-221
               

               
Cow position:
               
chr24:41982872-41982712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
57-474
               

               
Cow position:
               
chr24:11045979-11045580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
235, 15
               

               
Conread position:
               
59-410
               

               
Cow position:
               
chr24:29180470-29180805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 143
               

               
Conread position:
               
60-399
               

               
Cow position:
               
chr24:14320086-14319744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
241, 172
               

               
Conread position:
               
60-484
               

               
Cow position:
               
chr24:15802714-15803145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
242, 142
               

               
Conread position:
               
61-240
               

               
Cow position:
               
chr24:5861980-5862161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 151
               

               
Conread position:
               
62-257
               

               
Cow position:
               
chr24:10517846-10518039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
63-354
               

               
Cow position:
               
chr24:15674731-15674437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
33, 140
               

               
Conread position:
               
64-468
               

               
Cow position:
               
chr24:211555-211961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 144
               

               
Conread position:
               
66-356
               

               
Cow position:
               
chr24:42581254-42580966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
265, 23
               

               
Conread position:
               
66-406
               

               
Cow position:
               
chr24:6161272-6160935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
66-420
               

               
Cow position:
               
chr24:37246642-37246280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 136
               

               
Conread position:
               
69-307
               

               
Cow position:
               
chr24:17993095-17992860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
70-466
               

               
Cow position:
               
chr24:28497008-28496610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 138
               

               
Conread position:
               
72-260
               

               
Cow position:
               
chr24:40274129-40274314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
72-331
               

               
Cow position:
               
chr24:5130715-5130457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
169, 136
               

               
Conread position:
               
74-308
               

               
Cow position:
               
chr24:25894421-25894653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
75-399
               

               
Cow position:
               
chr24:32740028-32739706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
29, 134
               

               
Conread position:
               
75-410
               

               
Cow position:
               
chr24:5931454-5931785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
32, 128
               

               
Conread position:
               
76-399
               

               
Cow position:
               
chr24:20862375-20862050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
76-440
               

               
Cow position:
               
chr24:3493482-3493835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
77-246
               

               
Cow position:
               
chr24:15617698-15617863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
77-307
               

               
Cow position:
               
chr24:39199614-39199849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 159
               

               
Conread position:
               
77-331
               

               
Cow position:
               
chr24:16143467-16143715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
78-279
               

               
Cow position:
               
chr24:16378702-16378511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
78-416
               

               
Cow position:
               
chr24:35986123-35985801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
286, 111
               

               
Conread position:
               
79-229
               

               
Cow position:
               
chr24:40210089-40209941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
79-356
               

               
Cow position:
               
chr24:35836642-35836372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
218, 10
               

               
Conread position:
               
88-400
               

               
Cow position:
               
chr24:18257472-18257165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
89-356
               

               
Cow position:
               
chr24:28029105-28028840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
211, 50
               

               
Conread position:
               
89-364
               

               
Cow position:
               
chr24:12851336-12851595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
89-364
               

               
Cow position:
               
chr24:37876841-37877112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
211, 65
               

               
Conread position:
               
90-228
               

               
Cow position:
               
chr24:5151651-5151783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
91-275
               

               
Cow position:
               
chr24:32087558-32087377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
91-290
               

               
Cow position:
               
chr24:32419624-32419821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
91-307
               

               
Cow position:
               
chr24:13354448-13354234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
91-352
               

               
Cow position:
               
chr24:41963235-41963491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
190, 95
               

               
Conread position:
               
91-355
               

               
Cow position:
               
chr24:37205272-37205016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
91-399
               

               
Cow position:
               
chr24:274239-273929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
218, 111
               

               
Conread position:
               
91-405
               

               
Cow position:
               
chr24:25664731-25665040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
261, 109
               

               
Conread position:
               
91-410
               

               
Cow position:
               
chr24:17251865-17251544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
218, 111
               

               
Conread position:
               
91-410
               

               
Cow position:
               
chr24:41006450-41006769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
190, 48
               

               
Conread position:
               
91-433
               

               
Cow position:
               
chr24:2674933-2675264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
91-440
               

               
Cow position:
               
chr24:14337331-14337682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
119, 144
               

               
Conread position:
               
91-468
               

               
Cow position:
               
chr24:32054272-32054635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 117
               

               
Conread position:
               
92-246
               

               
Cow position:
               
chr24:26231202-26231050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
92-308
               

               
Cow position:
               
chr24:25978241-25978026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
176, 11
               

               
Conread position:
               
92-345
               

               
Cow position:
               
chr24:39289619-39289865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
182, 5
               

               
Conread position:
               
92-353
               

               
Cow position:
               
chr24:23715933-23715684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
92-355
               

               
Cow position:
               
chr24:1272268-1272000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
81, 110
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr24:39190027-39190292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
29, 46
               

               
Conread position:
               
92-357
               

               
Cow position:
               
chr24:13238012-13238268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
92-364
               

               
Cow position:
               
chr24:8810709-8810985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 28
               

               
Conread position:
               
92-468
               

               
Cow position:
               
chr24:30235480-30235847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
206, 110
               

               
Conread position:
               
94-231
               

               
Cow position:
               
chr24:40607022-40607156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
94-410
               

               
Cow position:
               
chr24:13880660-13880978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
207, 108
               

               
Conread position:
               
95-240
               

               
Cow position:
               
chr24:28216451-28216594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
95-307
               

               
Cow position:
               
chr24:16993715-16993505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
95-440
               

               
Cow position:
               
chr24:2402772-2402417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
101, 138
               

               
Conread position:
               
95-473
               

               
Cow position:
               
chr24:34213629-34213246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
138, 343
               

               
Conread position:
               
96-354
               

               
Cow position:
               
chr24:32014730-32014988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
25, 42
               

               
Conread position:
               
96-409
               

               
Cow position:
               
chr24:6071204-6071514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 90
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr24:6090923-6091239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
196, 107
               

               
Conread position:
               
96-467
               

               
Cow position:
               
chr24:44041400-44041032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 81
               

               
Conread position:
               
97-355
               

               
Cow position:
               
chr24:32668885-32669144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
108, 60
               

               
Conread position:
               
98-331
               

               
Cow position:
               
chr24:228120-227892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
135, 42
               

               
Conread position:
               
101-324
               

               
Cow position:
               
chr24:10311776-10312001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
92, 6
               

               
Conread position:
               
101-399
               

               
Cow position:
               
chr24:16298374-16298665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
251, 79
               

               
Conread position:
               
102-410
               

               
Cow position:
               
chr24:15875018-15874708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
179, 100
               

               
Conread position:
               
108-410
               

               
Cow position:
               
chr24:4241079-4240775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
174, 94
               

               
Conread position:
               
108-410
               

               
Cow position:
               
chr24:28221349-28221045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
205, 94
               

               
Conread position:
               
108-433
               

               
Cow position:
               
chr24:14648708-14648406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
299, 6
               

               
Conread position:
               
108-489
               

               
Cow position:
               
chr24:3165443-3165812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 62
               

               
Conread position:
               
109-307
               

               
Cow position:
               
chr24:40781959-40781763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
109-356
               

               
Cow position:
               
chr24:42102989-42103233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
87, 116
               

               
Conread position:
               
110-364
               

               
Cow position:
               
chr24:11875002-11874760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
240, 9
               

               
Conread position:
               
111-307
               

               
Cow position:
               
chr24:18846627-18846824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
93, 176
               

               
Conread position:
               
111-379
               

               
Cow position:
               
chr24:12498621-12498886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
188, 75
               

               
Conread position:
               
112-308
               

               
Cow position:
               
chr24:30965063-30964873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
112-400
               

               
Cow position:
               
chr24:37650301-37650579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
280, 74
               

               
Conread position:
               
112-410
               

               
Cow position:
               
chr24:43384376-43384676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
112-433
               

               
Cow position:
               
chr24:28690316-28690631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
82, 185
               

               
Conread position:
               
112-484
               

               
Cow position:
               
chr24:3006407-3006780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
190, 92
               

               
Conread position:
               
113-356
               

               
Cow position:
               
chr24:5561591-5561829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
183, 7
               

               
Conread position:
               
114-399
               

               
Cow position:
               
chr24:20923226-20923493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
245, 72
               

               
Conread position:
               
114-399
               

               
Cow position:
               
chr24:27543852-27543569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 87
               

               
Conread position:
               
114-439
               

               
Cow position:
               
chr24:33153412-33153726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 41
               

               
Conread position:
               
114-449
               

               
Cow position:
               
chr24:41985590-41985947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
80, 126
               

               
Conread position:
               
114-466
               

               
Cow position:
               
chr24:39483100-39483450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 97
               

               
Conread position:
               
114-468
               

               
Cow position:
               
chr24:43363983-43364335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
115-307
               

               
Cow position:
               
chr24:12448020-12448210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
115-384
               

               
Cow position:
               
chr24:23556703-23556435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 65
               

               
Conread position:
               
115-394
               

               
Cow position:
               
chr24:6956809-6957080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
124, 61
               

               
Conread position:
               
115-484
               

               
Cow position:
               
chr24:11080254-11079883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
187, 87
               

               
Conread position:
               
115-484
               

               
Cow position:
               
chr24:40247461-40247823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
187, 87
               

               
Conread position:
               
117-356
               

               
Cow position:
               
chr24:29606440-29606203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
117-378
               

               
Cow position:
               
chr24:8873441-8873182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
127, 91
               

               
Conread position:
               
117-383
               

               
Cow position:
               
chr24:40249636-40249906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
196, 85
               

               
Conread position:
               
117-400
               

               
Cow position:
               
chr24:20874307-20874588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 54
               

               
Conread position:
               
117-421
               

               
Cow position:
               
chr24:43733598-43733903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
216, 28
               

               
Conread position:
               
117-449
               

               
Cow position:
               
chr24:18405677-18405360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 94
               

               
Conread position:
               
120-395
               

               
Cow position:
               
chr24:38684473-38684196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
228, 91
               

               
Conread position:
               
121-307
               

               
Cow position:
               
chr24:44054511-44054327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
121-406
               

               
Cow position:
               
chr24:27267268-27267548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
121-468
               

               
Cow position:
               
chr24:29027684-29028015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
245, 5
               

               
Conread position:
               
122-410
               

               
Cow position:
               
chr24:33571632-33571922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
187, 82
               

               
Conread position:
               
122-447
               

               
Cow position:
               
chr24:25320624-25320957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 64
               

               
Conread position:
               
122-484
               

               
Cow position:
               
chr24:33573467-33573104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
187, 80
               

               
Conread position:
               
123-353
               

               
Cow position:
               
chr24:15288490-15288722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
175, 91
               

               
Conread position:
               
123-400
               

               
Cow position:
               
chr24:39850244-39849979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
110, 85
               

               
Conread position:
               
123-410
               

               
Cow position:
               
chr24:40259780-40260069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
178, 79
               

               
Conread position:
               
125-399
               

               
Cow position:
               
chr24:634623-634892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
8, 85
               

               
Conread position:
               
125-410
               

               
Cow position:
               
chr24:6921740-6922027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
189, 82
               

               
Conread position:
               
126-288
               

               
Cow position:
               
chr24:4724664-4724819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
126-440
               

               
Cow position:
               
chr24:20225374-20225695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
172, 7
               

               
Conread position:
               
127-384
               

               
Cow position:
               
chr24:27688115-27687855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
186, 75
               

               
Conread position:
               
130-484
               

               
Cow position:
               
chr24:27197330-27196975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
172, 72
               

               
Conread position:
               
131-326
               

               
Cow position:
               
chr24:9590374-9590184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
131-399
               

               
Cow position:
               
chr24:24491369-24491103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
80, 60
               

               
Conread position:
               
131-419
               

               
Cow position:
               
chr24:41206742-41206458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
221, 76
               

               
Conread position:
               
132-307
               

               
Cow position:
               
chr24:185171-184999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
132-410
               

               
Cow position:
               
chr24:26385015-26384735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
160, 70
               

               
Conread position:
               
135-307
               

               
Cow position:
               
chr24:36853864-36854034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
137-399
               

               
Cow position:
               
chr24:15057038-15057308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
137-406
               

               
Cow position:
               
chr24:33724218-33723932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 244
               

               
Conread position:
               
137-406
               

               
Cow position:
               
chr24:38374935-38375199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
159, 49
               

               
Conread position:
               
139-379
               

               
Cow position:
               
chr24:31370099-31369860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
192, 73
               

               
Conread position:
               
139-410
               

               
Cow position:
               
chr24:34532772-34533045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
159, 59
               

               
Conread position:
               
140-426
               

               
Cow position:
               
chr24:7301108-7301398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
149, 36
               

               
Conread position:
               
141-367
               

               
Cow position:
               
chr24:28233041-28233266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
141-442
               

               
Cow position:
               
chr24:39123514-39123818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
61, 124
               

               
Conread position:
               
142-352
               

               
Cow position:
               
chr24:43028680-43028462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
143-324
               

               
Cow position:
               
chr24:2226447-2226270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
143-364
               

               
Cow position:
               
chr24:16162451-16162667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
181, 56
               

               
Conread position:
               
143-410
               

               
Cow position:
               
chr24:12957067-12956802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
209, 64
               

               
Conread position:
               
146-356
               

               
Cow position:
               
chr24:34272458-34272665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
156, 65
               

               
Conread position:
               
148-405
               

               
Cow position:
               
chr24:5435384-5435131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
148-406
               

               
Cow position:
               
chr24:21252792-21252534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
154, 63
               

               
Conread position:
               
148-465
               

               
Cow position:
               
chr24:5754499-5754807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 61
               

               
Conread position:
               
148-478
               

               
Cow position:
               
chr24:3430380-3430720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
56, 155
               

               
Conread position:
               
149-312
               

               
Cow position:
               
chr24:28662909-28662747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
118, 62
               

               
Conread position:
               
151-405
               

               
Cow position:
               
chr24:27465904-27465664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
153-248
               

               
Cow position:
               
chr24:3663848-3663941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
154-356
               

               
Cow position:
               
chr24:24498508-24498310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
154-359
               

               
Cow position:
               
chr24:27735907-27735708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
154-385
               

               
Cow position:
               
chr24:28319542-28319307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
155-439
               

               
Cow position:
               
chr24:40300821-40301109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
135, 34
               

               
Conread position:
               
156-468
               

               
Cow position:
               
chr24:17311543-17311243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
208, 51
               

               
Conread position:
               
156-476
               

               
Cow position:
               
chr24:12466698-12466387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
208, 46
               

               
Conread position:
               
157-439
               

               
Cow position:
               
chr24:15508876-15508589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
158-353
               

               
Cow position:
               
chr24:20988332-20988141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
158-406
               

               
Cow position:
               
chr24:38347347-38347599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
158-484
               

               
Cow position:
               
chr24:27675115-27675440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
144, 49
               

               
Conread position:
               
160-398
               

               
Cow position:
               
chr24:34315029-34315260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
193, 38
               

               
Conread position:
               
162-406
               

               
Cow position:
               
chr24:18734688-18734437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
80, 52
               

               
Conread position:
               
165-409
               

               
Cow position:
               
chr24:40908691-40908938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
119, 49
               

               
Conread position:
               
166-399
               

               
Cow position:
               
chr24:26929273-26929037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
164, 45
               

               
Conread position:
               
170-404
               

               
Cow position:
               
chr24:9222696-9222459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
122, 41
               

               
Conread position:
               
171-410
               

               
Cow position:
               
chr24:29781843-29782081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
121, 40
               

               
Conread position:
               
171-476
               

               
Cow position:
               
chr24:27341343-27341038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
138, 40
               

               
Conread position:
               
173-410
               

               
Cow position:
               
chr24:20741005-20741233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
175-410
               

               
Cow position:
               
chr24:6914076-6913848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
132, 11
               

               
Conread position:
               
177-410
               

               
Cow position:
               
chr24:30177923-30178152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
182, 34
               

               
Conread position:
               
180-474
               

               
Cow position:
               
chr24:35332409-35332703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
173, 32
               

               
Conread position:
               
181-400
               

               
Cow position:
               
chr24:44808936-44809157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
183-307
               

               
Cow position:
               
chr24:34579178-34579300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
183-406
               

               
Cow position:
               
chr24:31159319-31159531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
186-406
               

               
Cow position:
               
chr24:28600917-28600700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
186-476
               

               
Cow position:
               
chr24:42345312-42345015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 26
               

               
Conread position:
               
189-363
               

               
Cow position:
               
chr24:14550204-14550378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
189-385
               

               
Cow position:
               
chr24:19535545-19535358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
176, 22
               

               
Conread position:
               
189-400
               

               
Cow position:
               
chr24:8770283-8770493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
176, 22
               

               
Conread position:
               
189-409
               

               
Cow position:
               
chr24:40091876-40091658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
189-475
               

               
Cow position:
               
chr24:28600155-28599879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
166, 19
               

               
Conread position:
               
194-364
               

               
Cow position:
               
chr24:19804391-19804562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
194-410
               

               
Cow position:
               
chr24:35405867-35405648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
196-399
               

               
Cow position:
               
chr24:1269506-1269705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
16, 114
               

               
Conread position:
               
196-410
               

               
Cow position:
               
chr24:591613-591831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 211
               

               
Conread position:
               
197-355
               

               
Cow position:
               
chr24:21093756-21093595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
197-468
               

               
Cow position:
               
chr24:17860546-17860284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
167, 108
               

               
Conread position:
               
198-367
               

               
Cow position:
               
chr24:30900521-30900353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
198-367
               

               
Cow position:
               
chr24:34369300-34369129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
100, 44
               

               
Conread position:
               
198-406
               

               
Cow position:
               
chr24:18331442-18331636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
65, 93
               

               
Conread position:
               
198-410
               

               
Cow position:
               
chr24:18974907-18975118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
167, 35
               

               
Conread position:
               
198-468
               

               
Cow position:
               
chr24:34742455-34742726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
198-471
               

               
Cow position:
               
chr24:40592426-40592692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
199-354
               

               
Cow position:
               
chr24:6677209-6677364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
199-364
               

               
Cow position:
               
chr24:31816292-31816459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
102, 141
               

               
Conread position:
               
199-365
               

               
Cow position:
               
chr24:6508056-6507891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
199-385
               

               
Cow position:
               
chr24:8886623-8886809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
153, 96
               

               
Conread position:
               
199-385
               

               
Cow position:
               
chr24:23685354-23685171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
199-410
               

               
Cow position:
               
chr24:23695188-23694978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
94, 26
               

               
Conread position:
               
199-424
               

               
Cow position:
               
chr24:44702685-44702911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
159, 44
               

               
Conread position:
               
199-432
               

               
Cow position:
               
chr24:40184330-40184568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
199-476
               

               
Cow position:
               
chr24:27096393-27096672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
152, 19
               

               
Conread position:
               
201-303
               

               
Cow position:
               
chr24:40206785-40206887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
201-355
               

               
Cow position:
               
chr24:15639191-15639034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
201-476
               

               
Cow position:
               
chr24:17294478-17294208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
163, 107
               

               
Conread position:
               
202-400
               

               
Cow position:
               
chr24:43200564-43200369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 115
               

               
Conread position:
               
202-408
               

               
Cow position:
               
chr24:15861891-15861684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
202-433
               

               
Cow position:
               
chr24:29388960-29389185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
150, 23
               

               
Conread position:
               
203-396
               

               
Cow position:
               
chr24:21768353-21768551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
203-399
               

               
Cow position:
               
chr24:25424773-25424970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 120
               

               
Conread position:
               
204-383
               

               
Cow position:
               
chr24:28699769-28699949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
204-428
               

               
Cow position:
               
chr24:18324328-18324561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
204-468
               

               
Cow position:
               
chr24:35795028-35794761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 151
               

               
Conread position:
               
204-469
               

               
Cow position:
               
chr24:27726292-27726037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
160, 89
               

               
Conread position:
               
206-406
               

               
Cow position:
               
chr24:35073806-35074007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
207-351
               

               
Cow position:
               
chr24:30229181-30229330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
208-400
               

               
Cow position:
               
chr24:43370963-43371155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 123
               

               
Conread position:
               
208-406
               

               
Cow position:
               
chr24:18243749-18243553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
156, 74
               

               
Conread position:
               
208-410
               

               
Cow position:
               
chr24:25885442-25885244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
80, 108
               

               
Conread position:
               
208-477
               

               
Cow position:
               
chr24:17567106-17567368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
144, 82
               

               
Conread position:
               
209-408
               

               
Cow position:
               
chr24:27941291-27941094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
210-476
               

               
Cow position:
               
chr24:7913716-7913988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
95, 240
               

               
Conread position:
               
212-405
               

               
Cow position:
               
chr24:6900544-6900740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
213-364
               

               
Cow position:
               
chr24:43832081-43832231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
147, 26
               

               
Conread position:
               
213-388
               

               
Cow position:
               
chr24:27748375-27748543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 29
               

               
Conread position:
               
215-468
               

               
Cow position:
               
chr24:27967803-27968058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
144, 93
               

               
Conread position:
               
215-468
               

               
Cow position:
               
chr24:30314313-30314052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
83, 198
               

               
Conread position:
               
215-468
               

               
Cow position:
               
chr24:36404424-36404168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
216-433
               

               
Cow position:
               
chr24:19769222-19769432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
135, 77
               

               
Conread position:
               
218-337
               

               
Cow position:
               
chr24:19495-19378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
218-399
               

               
Cow position:
               
chr24:35529649-35529827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
218-400
               

               
Cow position:
               
chr24:18390562-18390380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
146, 25
               

               
Conread position:
               
224-468
               

               
Cow position:
               
chr24:5151967-5152210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
225-406
               

               
Cow position:
               
chr24:25950934-25950752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 155
               

               
Conread position:
               
233-468
               

               
Cow position:
               
chr24:27608357-27608124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
131, 118
               

               
Conread position:
               
239-477
               

               
Cow position:
               
chr24:18343795-18344046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
245-398
               

               
Cow position:
               
chr24:27207442-27207288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
256-406
               

               
Cow position:
               
chr24:18695385-18695534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
108, 68
               

               
Conread position:
               
265-433
               

               
Cow position:
               
chr24:24457474-24457305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
33, 139
               
Show alignments to all cow chromosomes.