• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-unkn-MI-P-NA-afr-a-10-1-UM.s1.3
        

               
Conread position:
               
1-144
               

               
Cow position:
               
chr25:27521603-27521461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr25:20785995-20785841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
139, 16
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr25:33466505-33466668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
127, 16
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr25:5824003-5824167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr25:18474734-18474910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr25:26228130-26228303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr25:19367161-19366980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr25:13962344-13962523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr25:11929027-11928840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 130
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr25:23394402-23394582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr25:9268703-9268892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr25:38135257-38135452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr25:40338091-40338287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr25:17562604-17562804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
197, 16
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr25:12841554-12841346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr25:15024705-15024904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr25:12219800-12220007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr25:9647425-9647640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr25:12081818-12081610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr25:27535405-27535193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr25:35612799-35612590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr25:11895955-11895737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
21, 140
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr25:2595521-2595740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr25:20634152-20634352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr25:41121544-41121760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr25:40906742-40906522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr25:9595853-9596070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
215, 16
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr25:33978872-33978644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
212, 15
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr25:41097659-41097421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr25:9045062-9045307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr25:9178700-9178458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 164
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr25:10580554-10580303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr25:32824089-32823841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr25:13736869-13736591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
195, 16
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr25:34000218-34000481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr25:36962465-36962188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
76, 16
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr25:32606984-32606711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
81, 15
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr25:15006754-15007020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr25:21017942-21017664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
14, 204
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr25:21041355-21041633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 16
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr25:598867-599149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
197, 16
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr25:17553730-17553446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr25:24636608-24636308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr25:9349730-9349429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr25:35037331-35037044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 143
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr25:6226586-6226870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr25:16801977-16802273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
137, 16
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr25:15005740-15006037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr25:12660976-12661281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr25:24083703-24083382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr25:6118306-6118002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 20
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr25:7069060-7069363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr25:12318304-12318002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr25:16136689-16136992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr25:27231886-27232173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr25:28863409-28863712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr25:34343371-34343061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr25:35567350-35567049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr25:18610577-18610881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr25:27226480-27226785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr25:32700664-32700349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr25:34237054-34236727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr25:8572336-8572028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr25:26791568-26791877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 22
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr25:29336020-29336341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr25:22730184-22730502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr25:25480099-25479752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
205, 233
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr25:4488270-4488610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 16
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr25:12839998-12840318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr25:23829581-23829236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr25:17994758-17994405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 16
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr25:30621500-30621137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
5, 150
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr25:10012520-10012163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr25:24302726-24302352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr25:20496068-20496421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr25:23672344-23671999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr25:23739719-23739373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr25:24227811-24227447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr25:35585991-35585634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr25:24654635-24654280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 16
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr25:6894029-6894378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr25:36871392-36871753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 197
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr25:11956363-11956723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 15
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr25:26939906-26940272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 16
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr25:15368221-15368577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr25:17659092-17659464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 16
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr25:35077130-35076786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr25:25866462-25866823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr25:31586577-31586945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
308, 22
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr25:38439695-38440069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 16
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr25:8231348-8230972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 16
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr25:18181657-18182027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
280, 16
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr25:17682240-17681863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 16
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr25:18323819-18323434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 16
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr25:26682101-26682484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
243, 13
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr25:41356263-41355878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 12
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr25:17658149-17658529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 16
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr25:30279674-30279289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 16
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr25:33255907-33256284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 16
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr25:32899278-32898884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
75, 117
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr25:2110618-2110999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr25:10011185-10010796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 16
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr25:26238407-26238799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 16
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr25:2047021-2046629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr25:16922259-16921862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 16
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr25:18160845-18161215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr25:18448364-18448769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr25:18490609-18491004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 95
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr25:25754461-25754067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr25:33838922-33839309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 20
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr25:34013219-34012820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 16
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr25:2498802-2499194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
308, 101
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr25:9395983-9396381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr25:39386295-39385899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 16
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr25:13787485-13787890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 16
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr25:25510429-25510832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 16
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr25:26282564-26282962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 16
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr25:35446480-35446873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 16
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr25:1951200-1951594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr25:5792268-5791863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 16
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr25:41385569-41385164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
314, 13
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr25:14569896-14570312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr25:14954490-14954082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr25:17598959-17598550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr25:22412944-22412538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr25:26756966-26757376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr25:27076597-27077007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr25:36127365-36126955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 16
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr25:36392429-36392020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 14
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr25:394886-395307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr25:12204003-12204441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 16
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr25:26654442-26654882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 16
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr25:27593841-27594271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 21
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr25:35339869-35340303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
422, 16
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr25:11662279-11661840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 16
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr25:26111818-26112242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 16
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr25:18721549-18721141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
199, 15
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr25:36765761-36765318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 16
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr25:23410192-23410651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 16
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr25:12824495-12824022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 53
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr25:14791292-14791752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 16
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr25:8120311-8120779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 16
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr25:22314735-22315201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 16
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr25:35347439-35347900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 16
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr25:11666202-11666652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 16
               

               
Conread position:
               
2-125
               

               
Cow position:
               
chr25:35579594-35579716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-128
               

               
Cow position:
               
chr25:25794371-25794246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr25:8935337-8935512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-184
               

               
Cow position:
               
chr25:12755897-12755715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr25:14808644-14808830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr25:14568968-14569172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr25:15452984-15452770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr25:18189838-18189622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr25:34508641-34508425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-225
               

               
Cow position:
               
chr25:4401847-4401627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr25:15429139-15428915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr25:14755874-14755657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr25:28274908-28274677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr25:18658440-18658674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr25:36757666-36757928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr25:32278494-32278212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr25:14720026-14720302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr25:19074151-19074450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr25:21562420-21562123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr25:30412410-30412107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr25:33901842-33901548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr25:4932-5230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr25:4857957-4857655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 15
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr25:4860912-4860608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 19
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr25:5461710-5462012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr25:17993982-17993681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr25:20771798-20771496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 15
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr25:26756008-26756310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr25:29802204-29801902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr25:35589610-35589912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr25:14874114-14874408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr25:10158282-10158599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr25:10896192-10895827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-374
               

               
Cow position:
               
chr25:3992325-3992698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 15
               

               
Conread position:
               
2-376
               

               
Cow position:
               
chr25:10367151-10366790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr25:19586798-19586415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr25:8655830-8656227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr25:12753376-12752983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr25:15412561-15412960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr25:17808242-17807843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr25:34257523-34257922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:6740356-6740755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:7717480-7717887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:12943490-12943081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:13955849-13955440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:13967128-13966720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:14555208-14555617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:15618236-15618645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:19139032-19138623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:19339348-19339756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:22198122-22198531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:23601403-23600994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:25873452-25873043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:27017458-27017048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:27145972-27146386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:29525327-29524918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:33990127-33989720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:34121553-34121144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:34164021-34163618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 13
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:35554209-35554627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
169, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:35649373-35649782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:36351279-36351688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:36554555-36554944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
323, 60
               

               
Conread position:
               
2-439
               

               
Cow position:
               
chr25:24572605-24573039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 205
               

               
Conread position:
               
2-440
               

               
Cow position:
               
chr25:41351662-41351230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
295, 15
               

               
Conread position:
               
2-450
               

               
Cow position:
               
chr25:19924060-19924506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
279, 15
               

               
Conread position:
               
2-468
               

               
Cow position:
               
chr25:11437267-11436811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 15
               

               
Conread position:
               
2-477
               

               
Cow position:
               
chr25:32609879-32609405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr25:28272849-28273332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 200
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr25:18310311-18310509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr25:27510726-27510520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
21, 177
               

               
Conread position:
               
3-245
               

               
Cow position:
               
chr25:39313354-39313113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr25:14960171-14959842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
76, 14
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr25:34502145-34501796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 14
               

               
Conread position:
               
3-382
               

               
Cow position:
               
chr25:10504801-10504425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr25:13332955-13333354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
73, 118
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr25:40388914-40388527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 13
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr25:2135901-2136293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 14
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr25:27531728-27531335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 5
               

               
Conread position:
               
3-421
               

               
Cow position:
               
chr25:20394735-20395146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
3-468
               

               
Cow position:
               
chr25:4522281-4521841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 14
               

               
Conread position:
               
3-468
               

               
Cow position:
               
chr25:11054466-11054900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
407, 79
               

               
Conread position:
               
4-150
               

               
Cow position:
               
chr25:10867438-10867582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chr25:11826968-11826753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
173, 13
               

               
Conread position:
               
4-237
               

               
Cow position:
               
chr25:11961087-11961314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
4-299
               

               
Cow position:
               
chr25:23571441-23571146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
179, 13
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr25:3968947-3969232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
4-400
               

               
Cow position:
               
chr25:8482776-8482377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 13
               

               
Conread position:
               
4-405
               

               
Cow position:
               
chr25:18294778-18294379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 13
               

               
Conread position:
               
4-406
               

               
Cow position:
               
chr25:11585049-11585453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 144
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr25:26923386-26923793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 13
               

               
Conread position:
               
4-450
               

               
Cow position:
               
chr25:22530825-22531265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
4-468
               

               
Cow position:
               
chr25:40321754-40321291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
176, 17
               

               
Conread position:
               
4-471
               

               
Cow position:
               
chr25:10407881-10407418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 13
               

               
Conread position:
               
5-139
               

               
Cow position:
               
chr25:13815651-13815519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr25:20652434-20652202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr25:19131567-19131872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
5-350
               

               
Cow position:
               
chr25:26353222-26352882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
238, 12
               

               
Conread position:
               
5-354
               

               
Cow position:
               
chr25:13960603-13960950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
5-398
               

               
Cow position:
               
chr25:13569634-13569242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
5-406
               

               
Cow position:
               
chr25:6891992-6891590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr25:27868348-27868742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 10
               

               
Conread position:
               
5-476
               

               
Cow position:
               
chr25:21950665-21951128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
344, 12
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr25:5538961-5539338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 11
               

               
Conread position:
               
6-406
               

               
Cow position:
               
chr25:18885941-18885546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 11
               

               
Conread position:
               
8-190
               

               
Cow position:
               
chr25:4337071-4337258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
8-190
               

               
Cow position:
               
chr25:36149245-36149066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
8-222
               

               
Cow position:
               
chr25:18487017-18487228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
8-298
               

               
Cow position:
               
chr25:35330975-35330684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
8-307
               

               
Cow position:
               
chr25:5154943-5154648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
8-307
               

               
Cow position:
               
chr25:18082496-18082200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
8-307
               

               
Cow position:
               
chr25:37894544-37894838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr25:9078354-9078652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
8-335
               

               
Cow position:
               
chr25:16967548-16967224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
8-343
               

               
Cow position:
               
chr25:14823197-14822874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
119, 9
               

               
Conread position:
               
8-403
               

               
Cow position:
               
chr25:13429582-13429203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
8-421
               

               
Cow position:
               
chr25:24136916-24136485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
8-468
               

               
Cow position:
               
chr25:8576233-8576690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
73, 156
               

               
Conread position:
               
8-476
               

               
Cow position:
               
chr25:16738400-16737933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 9
               

               
Conread position:
               
9-207
               

               
Cow position:
               
chr25:7819611-7819411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
9-264
               

               
Cow position:
               
chr25:2624187-2624436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
10-331
               

               
Cow position:
               
chr25:14647995-14647682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
59, 7
               

               
Conread position:
               
10-340
               

               
Cow position:
               
chr25:5611349-5611683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 182
               

               
Conread position:
               
11-399
               

               
Cow position:
               
chr25:36746902-36746513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 6
               

               
Conread position:
               
12-355
               

               
Cow position:
               
chr25:30817116-30817462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 54
               

               
Conread position:
               
14-422
               

               
Cow position:
               
chr25:20403173-20402757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 189
               

               
Conread position:
               
16-198
               

               
Cow position:
               
chr25:35625685-35625504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
17-189
               

               
Cow position:
               
chr25:24779151-24779319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 121
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr25:16002197-16002017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
17-270
               

               
Cow position:
               
chr25:30267909-30268168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 190
               

               
Conread position:
               
17-279
               

               
Cow position:
               
chr25:15247198-15247454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
17-307
               

               
Cow position:
               
chr25:11044192-11044480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
17-332
               

               
Cow position:
               
chr25:6606798-6606496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
216, 73
               

               
Conread position:
               
17-350
               

               
Cow position:
               
chr25:14618202-14617863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 203
               

               
Conread position:
               
17-352
               

               
Cow position:
               
chr25:13132310-13132649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 143
               

               
Conread position:
               
17-353
               

               
Cow position:
               
chr25:16957618-16957275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 125
               

               
Conread position:
               
17-354
               

               
Cow position:
               
chr25:4049581-4049915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
49, 133
               

               
Conread position:
               
17-354
               

               
Cow position:
               
chr25:11056427-11056760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 170
               

               
Conread position:
               
17-355
               

               
Cow position:
               
chr25:17659774-17660119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 149
               

               
Conread position:
               
17-359
               

               
Cow position:
               
chr25:26911210-26910869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
82, 197
               

               
Conread position:
               
17-399
               

               
Cow position:
               
chr25:9641894-9642285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 11
               

               
Conread position:
               
17-400
               

               
Cow position:
               
chr25:40657849-40658232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
62, 87
               

               
Conread position:
               
17-406
               

               
Cow position:
               
chr25:20060479-20060090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 169
               

               
Conread position:
               
17-406
               

               
Cow position:
               
chr25:25827010-25827405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 217
               

               
Conread position:
               
17-410
               

               
Cow position:
               
chr25:21024645-21024274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
17-413
               

               
Cow position:
               
chr25:37638102-37637708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
299, 86
               

               
Conread position:
               
17-440
               

               
Cow position:
               
chr25:14225253-14224830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 190
               

               
Conread position:
               
17-445
               

               
Cow position:
               
chr25:41366610-41366190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
297, 164
               

               
Conread position:
               
17-466
               

               
Cow position:
               
chr25:36779045-36779495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 185
               

               
Conread position:
               
17-474
               

               
Cow position:
               
chr25:3145395-3145846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 191
               

               
Conread position:
               
18-189
               

               
Cow position:
               
chr25:27543456-27543285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-308
               

               
Cow position:
               
chr25:7732515-7732801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
18-320
               

               
Cow position:
               
chr25:34156224-34156523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 190
               

               
Conread position:
               
18-481
               

               
Cow position:
               
chr25:21191039-21191498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 176
               

               
Conread position:
               
19-288
               

               
Cow position:
               
chr25:17992590-17992323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr25:26869706-26870001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
77, 28
               

               
Conread position:
               
19-327
               

               
Cow position:
               
chr25:5604688-5604387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
301, 167
               

               
Conread position:
               
19-410
               

               
Cow position:
               
chr25:3140857-3141250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 183
               

               
Conread position:
               
19-410
               

               
Cow position:
               
chr25:41107312-41107696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 150
               

               
Conread position:
               
20-410
               

               
Cow position:
               
chr25:4897647-4898038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 193
               

               
Conread position:
               
21-206
               

               
Cow position:
               
chr25:18072757-18072942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-306
               

               
Cow position:
               
chr25:37593952-37594250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
21-397
               

               
Cow position:
               
chr25:10643755-10643378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
22-144
               

               
Cow position:
               
chr25:11318056-11318178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
22-307
               

               
Cow position:
               
chr25:16033265-16033554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 111
               

               
Conread position:
               
22-440
               

               
Cow position:
               
chr25:7216376-7216804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 184
               

               
Conread position:
               
23-192
               

               
Cow position:
               
chr25:13444077-13443902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
23-235
               

               
Cow position:
               
chr25:16316343-16316559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
52, 185
               

               
Conread position:
               
23-266
               

               
Cow position:
               
chr25:12496350-12496103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 181
               

               
Conread position:
               
23-279
               

               
Cow position:
               
chr25:13122491-13122749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
49, 184
               

               
Conread position:
               
23-300
               

               
Cow position:
               
chr25:22550043-22549783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
23-307
               

               
Cow position:
               
chr25:33091423-33091134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 95
               

               
Conread position:
               
23-307
               

               
Cow position:
               
chr25:37687603-37687324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 80
               

               
Conread position:
               
23-355
               

               
Cow position:
               
chr25:9625365-9625698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
52, 85
               

               
Conread position:
               
23-405
               

               
Cow position:
               
chr25:34659549-34659165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 179
               

               
Conread position:
               
23-405
               

               
Cow position:
               
chr25:38972387-38972771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
7, 111
               

               
Conread position:
               
23-421
               

               
Cow position:
               
chr25:14834112-14833707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 62
               

               
Conread position:
               
23-468
               

               
Cow position:
               
chr25:20076047-20076493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 102
               

               
Conread position:
               
25-306
               

               
Cow position:
               
chr25:13067425-13067146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
25-308
               

               
Cow position:
               
chr25:24663443-24663160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
25-400
               

               
Cow position:
               
chr25:35608169-35607792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 129
               

               
Conread position:
               
25-410
               

               
Cow position:
               
chr25:27143375-27142987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 178
               

               
Conread position:
               
26-333
               

               
Cow position:
               
chr25:24652989-24653284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
27-222
               

               
Cow position:
               
chr25:16841111-16840919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
28-348
               

               
Cow position:
               
chr25:11050949-11051256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
259, 58
               

               
Conread position:
               
28-476
               

               
Cow position:
               
chr25:15319490-15319924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 84
               

               
Conread position:
               
29-410
               

               
Cow position:
               
chr25:26618014-26618397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
258, 173
               

               
Conread position:
               
29-469
               

               
Cow position:
               
chr25:41387947-41387524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
377, 67
               

               
Conread position:
               
30-307
               

               
Cow position:
               
chr25:18271825-18272099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
209, 71
               

               
Conread position:
               
30-397
               

               
Cow position:
               
chr25:7641885-7641523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 35
               

               
Conread position:
               
31-240
               

               
Cow position:
               
chr25:9943882-9943672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
45, 70
               

               
Conread position:
               
31-307
               

               
Cow position:
               
chr25:7259111-7259386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
31-350
               

               
Cow position:
               
chr25:38570031-38569718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 151
               

               
Conread position:
               
31-406
               

               
Cow position:
               
chr25:1735753-1735377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 176
               

               
Conread position:
               
31-421
               

               
Cow position:
               
chr25:16866800-16867181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 124
               

               
Conread position:
               
31-439
               

               
Cow position:
               
chr25:1837796-1838209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 165
               

               
Conread position:
               
31-473
               

               
Cow position:
               
chr25:20650830-20651277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 100
               

               
Conread position:
               
31-484
               

               
Cow position:
               
chr25:18090485-18090940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
271, 171
               

               
Conread position:
               
31-498
               

               
Cow position:
               
chr25:23389709-23389253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 155
               

               
Conread position:
               
32-307
               

               
Cow position:
               
chr25:26187967-26187694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
32-484
               

               
Cow position:
               
chr25:3688979-3689432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 170
               

               
Conread position:
               
33-364
               

               
Cow position:
               
chr25:11830330-11830007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 117
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr25:7328919-7329072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
34-340
               

               
Cow position:
               
chr25:11294360-11294670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 22
               

               
Conread position:
               
34-384
               

               
Cow position:
               
chr25:12171031-12171375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 152
               

               
Conread position:
               
34-384
               

               
Cow position:
               
chr25:33664330-33663987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
82, 117
               

               
Conread position:
               
34-468
               

               
Cow position:
               
chr25:787839-788260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
401, 95
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr25:22297600-22297433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
36-239
               

               
Cow position:
               
chr25:23913158-23912960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
36-410
               

               
Cow position:
               
chr25:33589836-33589458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
26, 167
               

               
Conread position:
               
37-307
               

               
Cow position:
               
chr25:12208060-12208328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
37-307
               

               
Cow position:
               
chr25:13446348-13446083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
205, 70
               

               
Conread position:
               
37-384
               

               
Cow position:
               
chr25:23945944-23945596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
206, 52
               

               
Conread position:
               
38-230
               

               
Cow position:
               
chr25:19570826-19570637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
38-306
               

               
Cow position:
               
chr25:26896610-26896875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
41-279
               

               
Cow position:
               
chr25:12521818-12521567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
150, 129
               

               
Conread position:
               
41-306
               

               
Cow position:
               
chr25:10287900-10287625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
41-324
               

               
Cow position:
               
chr25:17426831-17427110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
41-341
               

               
Cow position:
               
chr25:17119612-17119318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
41-384
               

               
Cow position:
               
chr25:26849475-26849128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 167
               

               
Conread position:
               
41-405
               

               
Cow position:
               
chr25:23407273-23406902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
41-410
               

               
Cow position:
               
chr25:7800709-7801078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 167
               

               
Conread position:
               
41-410
               

               
Cow position:
               
chr25:8235667-8235296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 161
               

               
Conread position:
               
41-494
               

               
Cow position:
               
chr25:21121158-21121612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 161
               

               
Conread position:
               
42-307
               

               
Cow position:
               
chr25:17585359-17585096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
191, 135
               

               
Conread position:
               
42-380
               

               
Cow position:
               
chr25:5271161-5271506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 160
               

               
Conread position:
               
42-406
               

               
Cow position:
               
chr25:41363564-41363212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
43-439
               

               
Cow position:
               
chr25:24727210-24726809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 99
               

               
Conread position:
               
44-240
               

               
Cow position:
               
chr25:29559595-29559790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
7, 159
               

               
Conread position:
               
44-291
               

               
Cow position:
               
chr25:17191554-17191310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
44-356
               

               
Cow position:
               
chr25:13720964-13720653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
45-184
               

               
Cow position:
               
chr25:449123-448984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
45-294
               

               
Cow position:
               
chr25:30852351-30852596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
45-313
               

               
Cow position:
               
chr25:31064751-31065004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
45-384
               

               
Cow position:
               
chr25:34673013-34672675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
45-399
               

               
Cow position:
               
chr25:21209372-21209017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 150
               

               
Conread position:
               
45-410
               

               
Cow position:
               
chr25:9414705-9415072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 157
               

               
Conread position:
               
45-474
               

               
Cow position:
               
chr25:5514587-5515016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 50
               

               
Conread position:
               
46-257
               

               
Cow position:
               
chr25:37254526-37254732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
44, 142
               

               
Conread position:
               
46-416
               

               
Cow position:
               
chr25:6021548-6021918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 162
               

               
Conread position:
               
46-474
               

               
Cow position:
               
chr25:18564070-18564489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 168
               

               
Conread position:
               
47-209
               

               
Cow position:
               
chr25:26057922-26058083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
47-399
               

               
Cow position:
               
chr25:2414412-2414749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
44, 143
               

               
Conread position:
               
47-400
               

               
Cow position:
               
chr25:32191245-32191599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
48-406
               

               
Cow position:
               
chr25:30319867-30319507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 5
               

               
Conread position:
               
52-288
               

               
Cow position:
               
chr25:20790109-20789884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
52-307
               

               
Cow position:
               
chr25:18240737-18240990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
52-324
               

               
Cow position:
               
chr25:26319330-26319598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
52-395
               

               
Cow position:
               
chr25:16067847-16068191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
250, 50
               

               
Conread position:
               
52-410
               

               
Cow position:
               
chr25:35602016-35602376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
257, 150
               

               
Conread position:
               
52-474
               

               
Cow position:
               
chr25:6470630-6470212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 49
               

               
Conread position:
               
53-433
               

               
Cow position:
               
chr25:20069312-20069689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 74
               

               
Conread position:
               
54-342
               

               
Cow position:
               
chr25:16691087-16691392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
54-410
               

               
Cow position:
               
chr25:7608904-7609262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
227, 148
               

               
Conread position:
               
55-367
               

               
Cow position:
               
chr25:37469359-37469671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 183
               

               
Conread position:
               
56-221
               

               
Cow position:
               
chr25:11540702-11540864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
56-306
               

               
Cow position:
               
chr25:13412011-13412266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 149
               

               
Conread position:
               
57-384
               

               
Cow position:
               
chr25:29198918-29199244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 146
               

               
Conread position:
               
57-440
               

               
Cow position:
               
chr25:1096167-1096544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 15
               

               
Conread position:
               
58-307
               

               
Cow position:
               
chr25:13325192-13325436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 151
               

               
Conread position:
               
59-385
               

               
Cow position:
               
chr25:12359798-12360126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
222, 49
               

               
Conread position:
               
63-410
               

               
Cow position:
               
chr25:11097303-11097652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
219, 139
               

               
Conread position:
               
63-484
               

               
Cow position:
               
chr25:12157478-12157900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
239, 139
               

               
Conread position:
               
64-351
               

               
Cow position:
               
chr25:26225441-26225160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
64-401
               

               
Cow position:
               
chr25:27621683-27622020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
226, 35
               

               
Conread position:
               
65-224
               

               
Cow position:
               
chr25:22712032-22712189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
65-371
               

               
Cow position:
               
chr25:3167581-3167273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
237, 10
               

               
Conread position:
               
69-273
               

               
Cow position:
               
chr25:14255163-14255358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
69-468
               

               
Cow position:
               
chr25:6464427-6464033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 103
               

               
Conread position:
               
71-402
               

               
Cow position:
               
chr25:14274044-14274376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 137
               

               
Conread position:
               
72-441
               

               
Cow position:
               
chr25:31733128-31732760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 86
               

               
Conread position:
               
73-206
               

               
Cow position:
               
chr25:18012964-18013096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
74-400
               

               
Cow position:
               
chr25:26087121-26087451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
75-229
               

               
Cow position:
               
chr25:23325396-23325244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
75-279
               

               
Cow position:
               
chr25:36124307-36124507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
75-489
               

               
Cow position:
               
chr25:29383720-29383306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
206, 127
               

               
Conread position:
               
76-297
               

               
Cow position:
               
chr25:26938647-26938423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 8
               

               
Conread position:
               
76-302
               

               
Cow position:
               
chr25:16409124-16408901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
76-304
               

               
Cow position:
               
chr25:13553521-13553746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
154, 134
               

               
Conread position:
               
76-345
               

               
Cow position:
               
chr25:33687290-33687018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 266
               

               
Conread position:
               
76-351
               

               
Cow position:
               
chr25:9532258-9532531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
157, 132
               

               
Conread position:
               
77-356
               

               
Cow position:
               
chr25:12064028-12063748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
228, 122
               

               
Conread position:
               
78-416
               

               
Cow position:
               
chr25:13840506-13840163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 36
               

               
Conread position:
               
83-304
               

               
Cow position:
               
chr25:6421436-6421218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
84-421
               

               
Cow position:
               
chr25:12239518-12239193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
268, 11
               

               
Conread position:
               
88-321
               

               
Cow position:
               
chr25:4161340-4161573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
189, 98
               

               
Conread position:
               
89-237
               

               
Cow position:
               
chr25:14284147-14284001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
89-303
               

               
Cow position:
               
chr25:16688628-16688417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
89-354
               

               
Cow position:
               
chr25:12176577-12176310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
192, 113
               

               
Conread position:
               
89-400
               

               
Cow position:
               
chr25:36761737-36762037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
275, 73
               

               
Conread position:
               
89-406
               

               
Cow position:
               
chr25:41393042-41392723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 6
               

               
Conread position:
               
91-291
               

               
Cow position:
               
chr25:11315251-11315449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
91-298
               

               
Cow position:
               
chr25:9634554-9634747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
91-307
               

               
Cow position:
               
chr25:32514219-32514005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
91-379
               

               
Cow position:
               
chr25:16560967-16560682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
272, 117
               

               
Conread position:
               
91-395
               

               
Cow position:
               
chr25:18044877-18044570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
190, 111
               

               
Conread position:
               
91-410
               

               
Cow position:
               
chr25:5537025-5536704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
211, 111
               

               
Conread position:
               
91-433
               

               
Cow position:
               
chr25:12235130-12234795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
266, 28
               

               
Conread position:
               
91-464
               

               
Cow position:
               
chr25:5341274-5341647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 111
               

               
Conread position:
               
91-466
               

               
Cow position:
               
chr25:21193320-21192935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 121
               

               
Conread position:
               
91-473
               

               
Cow position:
               
chr25:19912918-19912539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
221, 111
               

               
Conread position:
               
92-306
               

               
Cow position:
               
chr25:23013837-23014055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
106, 58
               

               
Conread position:
               
92-364
               

               
Cow position:
               
chr25:28327469-28327200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
94-384
               

               
Cow position:
               
chr25:23334638-23334931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
219, 108
               

               
Conread position:
               
95-400
               

               
Cow position:
               
chr25:4548095-4547786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
70, 104
               

               
Conread position:
               
95-410
               

               
Cow position:
               
chr25:2511081-2510764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
218, 107
               

               
Conread position:
               
95-433
               

               
Cow position:
               
chr25:37448066-37448402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
273, 79
               

               
Conread position:
               
96-303
               

               
Cow position:
               
chr25:32848696-32848492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr25:380353-380038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
217, 106
               

               
Conread position:
               
97-410
               

               
Cow position:
               
chr25:11269569-11269259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
255, 105
               

               
Conread position:
               
99-307
               

               
Cow position:
               
chr25:2453962-2453755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
175, 87
               

               
Conread position:
               
99-307
               

               
Cow position:
               
chr25:26407831-26408035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
99-356
               

               
Cow position:
               
chr25:5756322-5756585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
108, 226
               

               
Conread position:
               
100-356
               

               
Cow position:
               
chr25:26881848-26882107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
134, 102
               

               
Conread position:
               
101-384
               

               
Cow position:
               
chr25:12750530-12750240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
229, 110
               

               
Conread position:
               
101-468
               

               
Cow position:
               
chr25:6683427-6683066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
263, 42
               

               
Conread position:
               
102-410
               

               
Cow position:
               
chr25:19531019-19531329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
180, 100
               

               
Conread position:
               
102-476
               

               
Cow position:
               
chr25:33959625-33959249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
190, 55
               

               
Conread position:
               
104-308
               

               
Cow position:
               
chr25:22277627-22277425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
104-371
               

               
Cow position:
               
chr25:10657401-10657119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
105-356
               

               
Cow position:
               
chr25:5847158-5846917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
188, 80
               

               
Conread position:
               
105-477
               

               
Cow position:
               
chr25:16064535-16064897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
107-369
               

               
Cow position:
               
chr25:14103936-14104184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
252, 79
               

               
Conread position:
               
107-410
               

               
Cow position:
               
chr25:18236735-18236429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
108-410
               

               
Cow position:
               
chr25:40957346-40957048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
249, 104
               

               
Conread position:
               
109-410
               

               
Cow position:
               
chr25:17037097-17037400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
200, 93
               

               
Conread position:
               
109-410
               

               
Cow position:
               
chr25:18155237-18155539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
133, 91
               

               
Conread position:
               
112-356
               

               
Cow position:
               
chr25:10698798-10699044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
134, 96
               

               
Conread position:
               
112-363
               

               
Cow position:
               
chr25:9842649-9842896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
121, 74
               

               
Conread position:
               
112-364
               

               
Cow position:
               
chr25:30816470-30816726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
154, 25
               

               
Conread position:
               
112-383
               

               
Cow position:
               
chr25:36119846-36120114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
188, 38
               

               
Conread position:
               
112-410
               

               
Cow position:
               
chr25:38910180-38910480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
201, 87
               

               
Conread position:
               
113-384
               

               
Cow position:
               
chr25:6967126-6966856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
120, 95
               

               
Conread position:
               
113-385
               

               
Cow position:
               
chr25:10137751-10138012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
114-266
               

               
Cow position:
               
chr25:10013739-10013589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
114-336
               

               
Cow position:
               
chr25:15668166-15667946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
114-474
               

               
Cow position:
               
chr25:23351042-23351399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 94
               

               
Conread position:
               
119-271
               

               
Cow position:
               
chr25:12807853-12807702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
114, 83
               

               
Conread position:
               
119-410
               

               
Cow position:
               
chr25:7445803-7446089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
13, 90
               

               
Conread position:
               
120-306
               

               
Cow position:
               
chr25:35655214-35655397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
120-350
               

               
Cow position:
               
chr25:20434207-20434433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
201, 66
               

               
Conread position:
               
120-440
               

               
Cow position:
               
chr25:38981759-38982075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
79, 116
               

               
Conread position:
               
120-468
               

               
Cow position:
               
chr25:15694636-15694978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
122-371
               

               
Cow position:
               
chr25:15273344-15273590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
244, 79
               

               
Conread position:
               
123-312
               

               
Cow position:
               
chr25:8485877-8485693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
125-410
               

               
Cow position:
               
chr25:29352268-29351980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
30, 83
               

               
Conread position:
               
126-468
               

               
Cow position:
               
chr25:21245948-21245608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 81
               

               
Conread position:
               
127-484
               

               
Cow position:
               
chr25:13062516-13062874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
175, 75
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr25:17354042-17354315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
80, 172
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr25:23738791-23738510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
150, 76
               

               
Conread position:
               
131-444
               

               
Cow position:
               
chr25:20625266-20624955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
167, 70
               

               
Conread position:
               
133-384
               

               
Cow position:
               
chr25:16242306-16242056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
133-410
               

               
Cow position:
               
chr25:9957369-9957100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
230, 173
               

               
Conread position:
               
134-288
               

               
Cow position:
               
chr25:33735288-33735440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
134-484
               

               
Cow position:
               
chr25:17538747-17538396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
175, 68
               

               
Conread position:
               
137-270
               

               
Cow position:
               
chr25:6803233-6803364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
137-395
               

               
Cow position:
               
chr25:26523648-26523890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
227, 71
               

               
Conread position:
               
137-410
               

               
Cow position:
               
chr25:10637837-10637562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
165, 65
               

               
Conread position:
               
137-464
               

               
Cow position:
               
chr25:36037121-36036787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
57, 296
               

               
Conread position:
               
139-275
               

               
Cow position:
               
chr25:20133739-20133611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
140-399
               

               
Cow position:
               
chr25:17418855-17419117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
162, 67
               

               
Conread position:
               
142-401
               

               
Cow position:
               
chr25:6886294-6886041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
145, 44
               

               
Conread position:
               
146-398
               

               
Cow position:
               
chr25:12097521-12097770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
189, 50
               

               
Conread position:
               
148-399
               

               
Cow position:
               
chr25:17975687-17975438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
216, 63
               

               
Conread position:
               
148-410
               

               
Cow position:
               
chr25:9847466-9847728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
133, 27
               

               
Conread position:
               
148-439
               

               
Cow position:
               
chr25:6424901-6424615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
151, 31
               

               
Conread position:
               
149-355
               

               
Cow position:
               
chr25:22910166-22909959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
149-355
               

               
Cow position:
               
chr25:41044498-41044702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
151, 10
               

               
Conread position:
               
149-361
               

               
Cow position:
               
chr25:22346331-22346531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
197, 22
               

               
Conread position:
               
149-400
               

               
Cow position:
               
chr25:25051703-25051450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
150, 62
               

               
Conread position:
               
149-408
               

               
Cow position:
               
chr25:27821091-27821354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
141, 60
               

               
Conread position:
               
150-356
               

               
Cow position:
               
chr25:16231442-16231237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
180, 36
               

               
Conread position:
               
150-407
               

               
Cow position:
               
chr25:27521303-27521066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
150-440
               

               
Cow position:
               
chr25:15714563-15714846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
154-385
               

               
Cow position:
               
chr25:13708703-13708929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
211, 57
               

               
Conread position:
               
157-406
               

               
Cow position:
               
chr25:12817062-12817312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
141, 50
               

               
Conread position:
               
157-409
               

               
Cow position:
               
chr25:20460820-20461066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
158-400
               

               
Cow position:
               
chr25:16039149-16038906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
124, 49
               

               
Conread position:
               
159-399
               

               
Cow position:
               
chr25:18968963-18969205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
131, 48
               

               
Conread position:
               
159-400
               

               
Cow position:
               
chr25:8347200-8347439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 52
               

               
Conread position:
               
159-416
               

               
Cow position:
               
chr25:29561655-29561911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
205, 48
               

               
Conread position:
               
160-410
               

               
Cow position:
               
chr25:23053248-23053499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
149, 51
               

               
Conread position:
               
162-348
               

               
Cow position:
               
chr25:9023339-9023521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
162-355
               

               
Cow position:
               
chr25:25961656-25961850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
165-439
               

               
Cow position:
               
chr25:10366054-10365780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 7
               

               
Conread position:
               
166-466
               

               
Cow position:
               
chr25:16319428-16319146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
157, 43
               

               
Conread position:
               
168-410
               

               
Cow position:
               
chr25:25948695-25948459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
197, 44
               

               
Conread position:
               
172-401
               

               
Cow position:
               
chr25:6474396-6474165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
129, 57
               

               
Conread position:
               
174-341
               

               
Cow position:
               
chr25:14117815-14117980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
181-468
               

               
Cow position:
               
chr25:21895174-21894888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
186-307
               

               
Cow position:
               
chr25:23920135-23920015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
186-367
               

               
Cow position:
               
chr25:10330676-10330502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
112, 25
               

               
Conread position:
               
186-397
               

               
Cow position:
               
chr25:20023681-20023462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 167
               

               
Conread position:
               
186-405
               

               
Cow position:
               
chr25:20348576-20348797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
129, 26
               

               
Conread position:
               
187-526
               

               
Cow position:
               
chr25:15412057-15411714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 228
               

               
Conread position:
               
188-400
               

               
Cow position:
               
chr25:12195605-12195397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
172, 23
               

               
Conread position:
               
194-406
               

               
Cow position:
               
chr25:36081601-36081813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
194-476
               

               
Cow position:
               
chr25:12261168-12260885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
195-399
               

               
Cow position:
               
chr25:6003268-6003062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 180
               

               
Conread position:
               
195-400
               

               
Cow position:
               
chr25:14512843-14513041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
195-467
               

               
Cow position:
               
chr25:36535705-36535438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
134, 15
               

               
Conread position:
               
198-326
               

               
Cow position:
               
chr25:8961191-8961319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
198-352
               

               
Cow position:
               
chr25:7440583-7440733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 128
               

               
Conread position:
               
198-356
               

               
Cow position:
               
chr25:35344766-35344924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
198-375
               

               
Cow position:
               
chr25:9990361-9990187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
166, 13
               

               
Conread position:
               
198-399
               

               
Cow position:
               
chr25:35625443-35625248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
166, 33
               

               
Conread position:
               
198-400
               

               
Cow position:
               
chr25:11131313-11131511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
159, 45
               

               
Conread position:
               
198-406
               

               
Cow position:
               
chr25:17712262-17712473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
163, 125
               

               
Conread position:
               
199-400
               

               
Cow position:
               
chr25:5837237-5837035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
110, 169
               

               
Conread position:
               
199-400
               

               
Cow position:
               
chr25:24168167-24167971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
117, 13
               

               
Conread position:
               
199-421
               

               
Cow position:
               
chr25:20785852-20785631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
165, 34
               

               
Conread position:
               
199-432
               

               
Cow position:
               
chr25:35332902-35333124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
74, 33
               

               
Conread position:
               
199-440
               

               
Cow position:
               
chr25:24406011-24405762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
22, 182
               

               
Conread position:
               
199-468
               

               
Cow position:
               
chr25:38135476-38135746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
40, 111
               

               
Conread position:
               
200-392
               

               
Cow position:
               
chr25:35612571-35612381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
52, 101
               

               
Conread position:
               
201-399
               

               
Cow position:
               
chr25:21266737-21266939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
201-400
               

               
Cow position:
               
chr25:14196586-14196790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 155
               

               
Conread position:
               
201-406
               

               
Cow position:
               
chr25:13642585-13642375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
201-429
               

               
Cow position:
               
chr25:22297286-22297056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
205, 96
               

               
Conread position:
               
202-378
               

               
Cow position:
               
chr25:14266770-14266595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
118, 31
               

               
Conread position:
               
202-406
               

               
Cow position:
               
chr25:28188216-28188010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
107, 40
               

               
Conread position:
               
203-400
               

               
Cow position:
               
chr25:17702230-17702040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
41, 98
               

               
Conread position:
               
203-474
               

               
Cow position:
               
chr25:22203957-22203684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
98, 205
               

               
Conread position:
               
204-382
               

               
Cow position:
               
chr25:24452434-24452255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
205-410
               

               
Cow position:
               
chr25:18988112-18988326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
205-450
               

               
Cow position:
               
chr25:33691289-33691541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
103, 34
               

               
Conread position:
               
206-406
               

               
Cow position:
               
chr25:18075405-18075610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
103, 46
               

               
Conread position:
               
207-388
               

               
Cow position:
               
chr25:40407732-40407552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
144, 32
               

               
Conread position:
               
207-392
               

               
Cow position:
               
chr25:12117249-12117066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
207-400
               

               
Cow position:
               
chr25:7306035-7306232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
88, 148
               

               
Conread position:
               
208-467
               

               
Cow position:
               
chr25:33550244-33550504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
209-342
               

               
Cow position:
               
chr25:12174766-12174629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
209-388
               

               
Cow position:
               
chr25:26700779-26700955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
209-408
               

               
Cow position:
               
chr25:26058324-26058525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 184
               

               
Conread position:
               
209-418
               

               
Cow position:
               
chr25:12778795-12778583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 148
               

               
Conread position:
               
209-421
               

               
Cow position:
               
chr25:17566326-17566542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
146, 107
               

               
Conread position:
               
209-433
               

               
Cow position:
               
chr25:9961439-9961204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
209-467
               

               
Cow position:
               
chr25:19679081-19679342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
100, 164
               

               
Conread position:
               
211-469
               

               
Cow position:
               
chr25:8918537-8918279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 160
               

               
Conread position:
               
212-408
               

               
Cow position:
               
chr25:16400507-16400324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
152, 6
               

               
Conread position:
               
212-421
               

               
Cow position:
               
chr25:7581685-7581470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
87, 27
               

               
Conread position:
               
212-438
               

               
Cow position:
               
chr25:16001779-16001553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
213-399
               

               
Cow position:
               
chr25:15254588-15254404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
151, 138
               

               
Conread position:
               
216-399
               

               
Cow position:
               
chr25:36026753-36026938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
217-360
               

               
Cow position:
               
chr25:10156338-10156479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
217-400
               

               
Cow position:
               
chr25:4002543-4002731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
81, 103
               

               
Conread position:
               
217-405
               

               
Cow position:
               
chr25:19129599-19129788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
5, 37
               

               
Conread position:
               
218-398
               

               
Cow position:
               
chr25:18293505-18293674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
139, 21
               

               
Conread position:
               
218-468
               

               
Cow position:
               
chr25:24669682-24669442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
137, 21
               

               
Conread position:
               
220-410
               

               
Cow position:
               
chr25:20085037-20085225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
145, 88
               

               
Conread position:
               
220-476
               

               
Cow position:
               
chr25:12294001-12293743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
73, 160
               

               
Conread position:
               
223-410
               

               
Cow position:
               
chr25:6256183-6255996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
139, 14
               

               
Conread position:
               
224-402
               

               
Cow position:
               
chr25:24008423-24008242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
229-468
               

               
Cow position:
               
chr25:15377092-15377323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
136, 69
               

               
Conread position:
               
229-476
               

               
Cow position:
               
chr25:21289099-21289350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 204
               

               
Conread position:
               
231-528
               

               
Cow position:
               
chr25:13380855-13380558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
70, 207
               

               
Conread position:
               
232-383
               

               
Cow position:
               
chr25:19478453-19478604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
234-395
               

               
Cow position:
               
chr25:61421-61586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
237-467
               

               
Cow position:
               
chr25:6961383-6961158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
128, 48
               

               
Conread position:
               
242-468
               

               
Cow position:
               
chr25:36033208-36033434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 86
               

               
Conread position:
               
243-405
               

               
Cow position:
               
chr25:10218278-10218112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               
Show alignments to all cow chromosomes.