Cow genome map

Conread name: Ss1.1-unkn-MI-P-NA-afr-a-10-1-UM.s1.3

Conread position: 1-123
Cow position: chrX:18215494-18215616 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 16

Conread position: 1-135
Cow position: chrX:865959-866092 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 1-144
Cow position: chrX:35260539-35260682 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 128, 16

Conread position: 1-151
Cow position: chrX:18194253-18194402 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 1-151
Cow position: chrX:23451892-23451745 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 1-175
Cow position: chrX:20954088-20954262 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 76, 86

Conread position: 1-178
Cow position: chrX:18989024-18989205 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 80, 15

Conread position: 1-178
Cow position: chrX:20726323-20726499 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 1-178
Cow position: chrX:32329585-32329760 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 1-178
Cow position: chrX:40475278-40475102 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 1-187
Cow position: chrX:21662658-21662843 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 1-189
Cow position: chrX:44901707-44901901 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 16

Conread position: 1-190
Cow position: chrX:5648833-5648644 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 57

Conread position: 1-190
Cow position: chrX:13405734-13405545 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 160, 16

Conread position: 1-190
Cow position: chrX:45992809-45993001 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 1-191
Cow position: chrX:23988104-23988289 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 1-192
Cow position: chrX:37781516-37781332 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 1-193
Cow position: chrX:37831910-37831711 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 15

Conread position: 1-196
Cow position: chrX:36975407-36975601 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 1-197
Cow position: chrX:3145565-3145762 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 81, 16

Conread position: 1-197
Cow position: chrX:6043926-6043727 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 16

Conread position: 1-197
Cow position: chrX:16324690-16324489 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 76, 16

Conread position: 1-197
Cow position: chrX:24366388-24366193 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 185, 0

Conread position: 1-197
Cow position: chrX:25425696-25425896 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 16

Conread position: 1-197
Cow position: chrX:33589697-33589897 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 16

Conread position: 1-198
Cow position: chrX:8517167-8517367 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 15

Conread position: 1-198
Cow position: chrX:28214897-28215098 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 78, 27

Conread position: 1-198
Cow position: chrX:39939191-39938991 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 16

Conread position: 1-198
Cow position: chrX:42381866-42381669 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 21, 57

Conread position: 1-199
Cow position: chrX:3582755-3582957 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 15

Conread position: 1-199
Cow position: chrX:4329522-4329320 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 89, 21

Conread position: 1-200
Cow position: chrX:20675662-20675861 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 96, 22

Conread position: 1-202
Cow position: chrX:17265489-17265283 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 78, 21

Conread position: 1-202
Cow position: chrX:23969920-23970121 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1-203
Cow position: chrX:38999459-38999661 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 16

Conread position: 1-204
Cow position: chrX:6695787-6695580 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 76, 16

Conread position: 1-205
Cow position: chrX:22409157-22408951 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 16

Conread position: 1-206
Cow position: chrX:27679914-27680128 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 16

Conread position: 1-207
Cow position: chrX:12980784-12980579 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 20, 0

Conread position: 1-207
Cow position: chrX:15038247-15038033 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 138, 20

Conread position: 1-207
Cow position: chrX:21815726-21815937 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 16

Conread position: 1-207
Cow position: chrX:25436370-25436160 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 77, 15

Conread position: 1-207
Cow position: chrX:28624196-28623994 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 82, 20

Conread position: 1-207
Cow position: chrX:29602477-29602281 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 1-207
Cow position: chrX:33493295-33493501 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 185, 16

Conread position: 1-207
Cow position: chrX:35847779-35847981 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 16, 0

Conread position: 1-207
Cow position: chrX:38840412-38840626 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 73, 16

Conread position: 1-208
Cow position: chrX:24826896-24827108 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 78, 16

Conread position: 1-209
Cow position: chrX:323478-323685 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 16, 0

Conread position: 1-211
Cow position: chrX:1499151-1499364 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 91, 16

Conread position: 1-211
Cow position: chrX:7513054-7513264 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 106, 16

Conread position: 1-211
Cow position: chrX:9854836-9855052 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 77, 16

Conread position: 1-211
Cow position: chrX:9953678-9953893 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 77, 16

Conread position: 1-211
Cow position: chrX:34543327-34543535 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 16, 0

Conread position: 1-211
Cow position: chrX:42530926-42530713 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 77, 15

Conread position: 1-211
Cow position: chrX:47243742-47243531 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 29, 152

Conread position: 1-219
Cow position: chrX:4750809-4750601 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 174
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 0

Conread position: 1-221
Cow position: chrX:13404789-13404565 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 81, 16

Conread position: 1-221
Cow position: chrX:37572727-37572944 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 16, 0

Conread position: 1-221
Cow position: chrX:41067396-41067623 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 76, 16

Conread position: 1-224
Cow position: chrX:26752356-26752126 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 16

Conread position: 1-226
Cow position: chrX:23038434-23038212 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-227
Cow position: chrX:158271-158048 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 83, 21

Conread position: 1-237
Cow position: chrX:23341430-23341201 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 16, 0

Conread position: 1-239
Cow position: chrX:12008119-12007884 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-240
Cow position: chrX:40180308-40180072 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 192, 0

Conread position: 1-241
Cow position: chrX:34993733-34993979 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 16

Conread position: 1-243
Cow position: chrX:15232070-15231826 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 110

Conread position: 1-243
Cow position: chrX:17892106-17892345 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-243
Cow position: chrX:30093801-30093564 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 184
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 232, 16

Conread position: 1-260
Cow position: chrX:27117526-27117782 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 51, 16

Conread position: 1-267
Cow position: chrX:10440279-10440013 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 74, 16

Conread position: 1-267
Cow position: chrX:38067150-38066887 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 1-275
Cow position: chrX:27019768-27020036 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 79, 16

Conread position: 1-278
Cow position: chrX:47965435-47965147 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 62, 55

Conread position: 1-279
Cow position: chrX:525239-525514 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 16

Conread position: 1-279
Cow position: chrX:24280497-24280773 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 1-280
Cow position: chrX:36794557-36794833 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-282
Cow position: chrX:42222005-42221732 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-289
Cow position: chrX:21319255-21319537 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 16

Conread position: 1-293
Cow position: chrX:20976504-20976213 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 50, 16

Conread position: 1-298
Cow position: chrX:18684342-18684632 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 16

Conread position: 1-298
Cow position: chrX:19320148-19320445 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 200
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 77, 15

Conread position: 1-300
Cow position: chrX:27977268-27976970 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 202

Conread position: 1-303
Cow position: chrX:626481-626183 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-303
Cow position: chrX:19447790-19447485 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 206
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 16

Conread position: 1-303
Cow position: chrX:36514025-36514314 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 139, 0

Conread position: 1-306
Cow position: chrX:529361-529664 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 79, 16

Conread position: 1-306
Cow position: chrX:2351625-2351927 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-306
Cow position: chrX:12437672-12437376 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 1-306
Cow position: chrX:14407887-14407587 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 0

Conread position: 1-306
Cow position: chrX:28646420-28646123 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 16

Conread position: 1-307
Cow position: chrX:3807956-3808274 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 53, 16

Conread position: 1-307
Cow position: chrX:7551232-7550930 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-307
Cow position: chrX:9403665-9403983 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 72, 16

Conread position: 1-307
Cow position: chrX:9898777-9898475 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 16

Conread position: 1-307
Cow position: chrX:15718114-15717814 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-307
Cow position: chrX:16279212-16279515 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 16

Conread position: 1-307
Cow position: chrX:16853826-16853523 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-307
Cow position: chrX:18118908-18118606 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 1-307
Cow position: chrX:18950177-18949879 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 16

Conread position: 1-307
Cow position: chrX:20957578-20957879 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 83, 16

Conread position: 1-307
Cow position: chrX:21862107-21861804 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 16

Conread position: 1-307
Cow position: chrX:22115722-22115416 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 16

Conread position: 1-307
Cow position: chrX:22493570-22493873 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-307
Cow position: chrX:22600851-22600551 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 1-307
Cow position: chrX:23316857-23316557 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-307
Cow position: chrX:24169757-24169449 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 78, 16

Conread position: 1-307
Cow position: chrX:26755066-26754766 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-307
Cow position: chrX:29849068-29848765 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-307
Cow position: chrX:30139221-30138918 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-307
Cow position: chrX:30180363-30180060 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-307
Cow position: chrX:44930204-44930501 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 232, 20

Conread position: 1-307
Cow position: chrX:48310822-48310500 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 93, 16

Conread position: 1-308
Cow position: chrX:1518883-1518572 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 82, 118

Conread position: 1-308
Cow position: chrX:4325928-4325630 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 15

Conread position: 1-308
Cow position: chrX:7809446-7809135 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 82, 16

Conread position: 1-308
Cow position: chrX:20382974-20382678 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 208
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 16

Conread position: 1-309
Cow position: chrX:11377132-11377441 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 16

Conread position: 1-312
Cow position: chrX:3570014-3570322 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-320
Cow position: chrX:41846971-41846655 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 7

Conread position: 1-326
Cow position: chrX:29864868-29864547 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 1-342
Cow position: chrX:41304180-41303845 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 237
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 87, 16

Conread position: 1-349
Cow position: chrX:502021-501675 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 16

Conread position: 1-349
Cow position: chrX:3130129-3130490 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 15

Conread position: 1-349
Cow position: chrX:33822661-33823011 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 241
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 78, 15

Conread position: 1-350
Cow position: chrX:4415412-4415747 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 234
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 16

Conread position: 1-350
Cow position: chrX:10415962-10415618 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-350
Cow position: chrX:39698890-39699237 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 16

Conread position: 1-351
Cow position: chrX:23218637-23218981 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 27

Conread position: 1-352
Cow position: chrX:9252608-9252264 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 16

Conread position: 1-353
Cow position: chrX:25281927-25281552 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 252
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 73, 16

Conread position: 1-354
Cow position: chrX:1978053-1978428 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 258
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 74, 14

Conread position: 1-354
Cow position: chrX:13069182-13068824 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 43, 21

Conread position: 1-354
Cow position: chrX:13089743-13089375 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 246
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 43, 21

Conread position: 1-354
Cow position: chrX:20652961-20653312 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 105, 16

Conread position: 1-354
Cow position: chrX:22330014-22329657 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 242
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 77, 162

Conread position: 1-354
Cow position: chrX:24735507-24735855 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 15

Conread position: 1-354
Cow position: chrX:34009307-34009663 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 90, 16

Conread position: 1-354
Cow position: chrX:36692802-36693148 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 83, 16

Conread position: 1-354
Cow position: chrX:42841496-42841134 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 78, 16

Conread position: 1-355
Cow position: chrX:160476-160119 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 15

Conread position: 1-355
Cow position: chrX:16733187-16732818 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 89, 15

Conread position: 1-355
Cow position: chrX:25205267-25205636 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 251
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 78, 16

Conread position: 1-355
Cow position: chrX:27485966-27486324 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 243
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 23, 16

Conread position: 1-355
Cow position: chrX:32182472-32182116 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 244
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 77, 16

Conread position: 1-355
Cow position: chrX:43648195-43647829 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 89, 16

Conread position: 1-355
Cow position: chrX:45658517-45658160 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 16

Conread position: 1-356
Cow position: chrX:4630137-4629770 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 250
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 81, 16

Conread position: 1-356
Cow position: chrX:9299284-9298920 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 64, 21

Conread position: 1-356
Cow position: chrX:15120324-15119970 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 15

Conread position: 1-356
Cow position: chrX:16711518-16711873 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 15

Conread position: 1-356
Cow position: chrX:21833447-21833804 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 198

Conread position: 1-356
Cow position: chrX:23280570-23280922 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 16

Conread position: 1-356
Cow position: chrX:24587891-24587535 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 16

Conread position: 1-356
Cow position: chrX:27318779-27319135 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 194, 16

Conread position: 1-356
Cow position: chrX:29915662-29915307 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 232, 16

Conread position: 1-356
Cow position: chrX:30143721-30143366 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 16

Conread position: 1-356
Cow position: chrX:30228547-30228192 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 16

Conread position: 1-356
Cow position: chrX:35240427-35240781 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 16

Conread position: 1-356
Cow position: chrX:41049670-41050034 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 246
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 77, 16

Conread position: 1-359
Cow position: chrX:16790254-16789924 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 16

Conread position: 1-359
Cow position: chrX:32144600-32144247 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-359
Cow position: chrX:37906507-37906886 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 250
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 70, 16

Conread position: 1-362
Cow position: chrX:3649245-3648892 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-362
Cow position: chrX:44086867-44087230 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 16

Conread position: 1-364
Cow position: chrX:5246811-5247187 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 252
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 85, 16

Conread position: 1-365
Cow position: chrX:2524172-2523802 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 16

Conread position: 1-365
Cow position: chrX:13058122-13058507 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 16

Conread position: 1-365
Cow position: chrX:19210832-19210469 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 249
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 73, 15

Conread position: 1-365
Cow position: chrX:24193678-24194032 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 252
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 74, 16

Conread position: 1-367
Cow position: chrX:6012544-6012178 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 16

Conread position: 1-367
Cow position: chrX:11674618-11674991 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 22

Conread position: 1-367
Cow position: chrX:20504325-20504682 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 260
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 83, 11

Conread position: 1-370
Cow position: chrX:34840208-34839850 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 249
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 107, 16

Conread position: 1-379
Cow position: chrX:24317629-24318003 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 16

Conread position: 1-384
Cow position: chrX:11949930-11949549 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 16

Conread position: 1-384
Cow position: chrX:22538391-22538008 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 16

Conread position: 1-384
Cow position: chrX:27498330-27498716 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 16

Conread position: 1-384
Cow position: chrX:34413339-34413724 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 16

Conread position: 1-384
Cow position: chrX:38151251-38151637 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 16

Conread position: 1-385
Cow position: chrX:4044295-4043910 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 16

Conread position: 1-385
Cow position: chrX:21227037-21227419 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 16

Conread position: 1-385
Cow position: chrX:34238283-34238665 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 16

Conread position: 1-385
Cow position: chrX:35268457-35268826 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 16

Conread position: 1-390
Cow position: chrX:4905427-4905038 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 199

Conread position: 1-395
Cow position: chrX:4633294-4632895 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 16

Conread position: 1-395
Cow position: chrX:4996178-4996554 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 16

Conread position: 1-395
Cow position: chrX:20801335-20801729 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 15

Conread position: 1-395
Cow position: chrX:27105821-27106219 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 20

Conread position: 1-395
Cow position: chrX:28111057-28111461 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 16

Conread position: 1-395
Cow position: chrX:39546417-39546020 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 205

Conread position: 1-395
Cow position: chrX:45967724-45968114 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 16

Conread position: 1-396
Cow position: chrX:15139985-15139590 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 15

Conread position: 1-396
Cow position: chrX:35288217-35288609 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 16

Conread position: 1-399
Cow position: chrX:1550510-1550913 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 203

Conread position: 1-399
Cow position: chrX:17794558-17794941 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 16

Conread position: 1-399
Cow position: chrX:24482807-24482410 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 16

Conread position: 1-399
Cow position: chrX:29942713-29943114 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 264
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 110, 15

Conread position: 1-399
Cow position: chrX:41122633-41123026 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 86

Conread position: 1-400
Cow position: chrX:16078232-16078623 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 265
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 96, 16

Conread position: 1-400
Cow position: chrX:20878199-20877799 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 16

Conread position: 1-400
Cow position: chrX:40121440-40121055 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 262
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 363, 16

Conread position: 1-400
Cow position: chrX:42281960-42282387 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 298
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 74, 153

Conread position: 1-400
Cow position: chrX:45113197-45113578 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 12

Conread position: 1-400
Cow position: chrX:45413086-45412700 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 16

Conread position: 1-401
Cow position: chrX:35937501-35937120 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 271
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 43, 16

Conread position: 1-402
Cow position: chrX:27705156-27705548 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 16

Conread position: 1-402
Cow position: chrX:37071963-37072368 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 16

Conread position: 1-402
Cow position: chrX:41879367-41878971 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 21

Conread position: 1-402
Cow position: chrX:46532957-46532540 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 16

Conread position: 1-403
Cow position: chrX:30163676-30163273 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 262
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 275, 201

Conread position: 1-405
Cow position: chrX:4123399-4123802 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 16

Conread position: 1-405
Cow position: chrX:18078348-18077941 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 201

Conread position: 1-405
Cow position: chrX:23386976-23386578 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 16

Conread position: 1-405
Cow position: chrX:24441687-24441278 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 16

Conread position: 1-405
Cow position: chrX:26531522-26531927 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 16

Conread position: 1-405
Cow position: chrX:30455059-30454653 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 16

Conread position: 1-405
Cow position: chrX:32094888-32094481 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 201

Conread position: 1-405
Cow position: chrX:37133971-37133565 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 14

Conread position: 1-405
Cow position: chrX:41156874-41157280 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 16

Conread position: 1-405
Cow position: chrX:45566171-45566600 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 284
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 206, 16

Conread position: 1-406
Cow position: chrX:5017841-5017449 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-406
Cow position: chrX:10412408-10412021 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 15

Conread position: 1-406
Cow position: chrX:11655640-11656057 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 14

Conread position: 1-406
Cow position: chrX:12249364-12249767 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 16

Conread position: 1-406
Cow position: chrX:28847319-28846916 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 16

Conread position: 1-406
Cow position: chrX:35680908-35681306 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 15

Conread position: 1-406
Cow position: chrX:39558803-39558385 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 15

Conread position: 1-406
Cow position: chrX:40452657-40452244 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 16

Conread position: 1-406
Cow position: chrX:42462186-42461779 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 322

Conread position: 1-406
Cow position: chrX:44054367-44054772 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 16

Conread position: 1-409
Cow position: chrX:2945307-2944896 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 16

Conread position: 1-409
Cow position: chrX:17964953-17964551 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 283
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 77, 16

Conread position: 1-409
Cow position: chrX:23986811-23987216 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 16

Conread position: 1-410
Cow position: chrX:10866304-10865899 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 16

Conread position: 1-410
Cow position: chrX:14162754-14163164 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 16

Conread position: 1-410
Cow position: chrX:14598409-14598818 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 16

Conread position: 1-410
Cow position: chrX:14819275-14819687 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 16

Conread position: 1-410
Cow position: chrX:18898088-18897682 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 16

Conread position: 1-410
Cow position: chrX:21785332-21785736 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 15

Conread position: 1-410
Cow position: chrX:23121946-23122359 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 165

Conread position: 1-410
Cow position: chrX:25459074-25458664 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 16

Conread position: 1-410
Cow position: chrX:29780308-29780714 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 16

Conread position: 1-410
Cow position: chrX:30823079-30823489 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 16

Conread position: 1-410
Cow position: chrX:31202403-31202813 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 14

Conread position: 1-410
Cow position: chrX:34754629-34754221 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 16

Conread position: 1-410
Cow position: chrX:38072204-38071796 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 16

Conread position: 1-410
Cow position: chrX:38963676-38964073 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 16

Conread position: 1-410
Cow position: chrX:39560089-39559679 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 16

Conread position: 1-410
Cow position: chrX:41103351-41103759 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 16

Conread position: 1-410
Cow position: chrX:41884873-41884446 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 16

Conread position: 1-410
Cow position: chrX:42120866-42121276 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 16

Conread position: 1-410
Cow position: chrX:45786693-45787099 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 16

Conread position: 1-411
Cow position: chrX:3654172-3654577 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 14

Conread position: 1-416
Cow position: chrX:1331499-1331918 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 1-416
Cow position: chrX:5353740-5353319 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 16

Conread position: 1-416
Cow position: chrX:6493295-6493710 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 16

Conread position: 1-416
Cow position: chrX:27095682-27096093 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 21

Conread position: 1-417
Cow position: chrX:27590470-27590060 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 16

Conread position: 1-418
Cow position: chrX:17743633-17744045 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 280
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 91, 21

Conread position: 1-419
Cow position: chrX:3154692-3154266 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 16

Conread position: 1-421
Cow position: chrX:1810597-1810180 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 84

Conread position: 1-421
Cow position: chrX:11073648-11073210 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 16

Conread position: 1-421
Cow position: chrX:13177897-13177485 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 16

Conread position: 1-421
Cow position: chrX:35388344-35387919 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 16

Conread position: 1-421
Cow position: chrX:42086426-42086840 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 16

Conread position: 1-433
Cow position: chrX:917814-917370 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 16

Conread position: 1-433
Cow position: chrX:12309823-12309388 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 16

Conread position: 1-433
Cow position: chrX:14974175-14973745 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 300
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 16

Conread position: 1-433
Cow position: chrX:15329216-15329642 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 21

Conread position: 1-433
Cow position: chrX:29289140-29289575 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 15

Conread position: 1-433
Cow position: chrX:47144639-47145084 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 302
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 112, 16

Conread position: 1-437
Cow position: chrX:5871880-5872318 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 16

Conread position: 1-437
Cow position: chrX:34441884-34441452 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 16

Conread position: 1-439
Cow position: chrX:35609549-35609990 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 20

Conread position: 1-439
Cow position: chrX:37231974-37232414 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 16

Conread position: 1-440
Cow position: chrX:7277496-7277915 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 15

Conread position: 1-440
Cow position: chrX:8869822-8869401 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 298
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 155, 16

Conread position: 1-440
Cow position: chrX:15007588-15007147 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 16

Conread position: 1-440
Cow position: chrX:28133912-28134347 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 16

Conread position: 1-440
Cow position: chrX:34532094-34532522 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 16

Conread position: 1-440
Cow position: chrX:45501707-45502147 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 103

Conread position: 1-445
Cow position: chrX:17497659-17498090 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 16

Conread position: 1-445
Cow position: chrX:44192880-44192442 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 96

Conread position: 1-447
Cow position: chrX:38227530-38227084 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 209

Conread position: 1-453
Cow position: chrX:151466-151915 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 16

Conread position: 1-458
Cow position: chrX:6543820-6544268 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 16

Conread position: 1-467
Cow position: chrX:40035906-40035417 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 16

Conread position: 1-468
Cow position: chrX:878807-878355 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 16

Conread position: 1-468
Cow position: chrX:35223865-35224321 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 16

Conread position: 1-468
Cow position: chrX:38439039-38439506 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 16

Conread position: 1-473
Cow position: chrX:18244545-18245016 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 322
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 10, 213

Conread position: 1-473
Cow position: chrX:23396169-23396634 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 16

Conread position: 1-474
Cow position: chrX:160991-161443 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 20

Conread position: 1-474
Cow position: chrX:27516099-27516561 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 16

Conread position: 1-474
Cow position: chrX:36250301-36249830 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 16

Conread position: 1-474
Cow position: chrX:40481307-40480838 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 20

Conread position: 1-475
Cow position: chrX:47873770-47873304 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 16

Conread position: 1-476
Cow position: chrX:1055829-1055348 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 16

Conread position: 1-476
Cow position: chrX:16703234-16703709 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 15

Conread position: 1-476
Cow position: chrX:23564234-23563758 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 16

Conread position: 1-476
Cow position: chrX:24105190-24105657 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 16

Conread position: 1-476
Cow position: chrX:30133745-30133285 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 324
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 308, 16

Conread position: 1-476
Cow position: chrX:31729021-31729475 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 21

Conread position: 1-476
Cow position: chrX:40827182-40826718 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 16

Conread position: 1-481
Cow position: chrX:1947158-1946674 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 16

Conread position: 1-484
Cow position: chrX:7742894-7742415 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 16

Conread position: 1-485
Cow position: chrX:22812625-22813111 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 16

Conread position: 1-520
Cow position: chrX:10438088-10437590 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 16

Conread position: 2-123
Cow position: chrX:29859383-29859263 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 2-128
Cow position: chrX:2293036-2292911 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 2-133
Cow position: chrX:38584291-38584421 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 2-135
Cow position: chrX:21459041-21458909 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 2-140
Cow position: chrX:19333581-19333444 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 2-144
Cow position: chrX:17231064-17231205 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 2-144
Cow position: chrX:34797598-34797739 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 2-166
Cow position: chrX:9641868-9641705 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 2-169
Cow position: chrX:6581498-6581664 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 2-188
Cow position: chrX:28706666-28706851 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 2-190
Cow position: chrX:13928189-13928004 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 2-193
Cow position: chrX:21191437-21191632 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 10

Conread position: 2-193
Cow position: chrX:38961282-38961093 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 2-197
Cow position: chrX:13030077-13029883 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 2-197
Cow position: chrX:18488150-18487956 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 0

Conread position: 2-198
Cow position: chrX:42499510-42499306 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 89, 15

Conread position: 2-198
Cow position: chrX:44961277-44961472 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 2-199
Cow position: chrX:16086560-16086364 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 0

Conread position: 2-203
Cow position: chrX:6279046-6278852 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 2-205
Cow position: chrX:3596503-3596301 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 15, 0

Conread position: 2-207
Cow position: chrX:17663354-17663144 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 79, 15

Conread position: 2-207
Cow position: chrX:25163357-25163561 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 80, 15

Conread position: 2-208
Cow position: chrX:30688629-30688834 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 15, 0

Conread position: 2-209
Cow position: chrX:30825212-30825418 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 15, 0

Conread position: 2-210
Cow position: chrX:31745933-31745726 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 2-211
Cow position: chrX:9635689-9635473 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 95, 15

Conread position: 2-217
Cow position: chrX:39757597-39757809 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 15, 0

Conread position: 2-221
Cow position: chrX:2048667-2048889 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 191, 15

Conread position: 2-221
Cow position: chrX:13266266-13266044 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 76, 26

Conread position: 2-221
Cow position: chrX:22603875-22603659 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-221
Cow position: chrX:28503900-28504106 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 2-236
Cow position: chrX:12691095-12690864 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 15, 0

Conread position: 2-236
Cow position: chrX:28752776-28752545 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-237
Cow position: chrX:11461307-11461076 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 2-239
Cow position: chrX:2715186-2715420 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-239
Cow position: chrX:40224679-40224445 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-240
Cow position: chrX:5406623-5406857 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 2-240
Cow position: chrX:7572944-7573178 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 2-240
Cow position: chrX:16040116-16039881 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 2-240
Cow position: chrX:16222190-16222424 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-240
Cow position: chrX:19399342-19399577 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-240
Cow position: chrX:22521657-22521422 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-240
Cow position: chrX:22522267-22522032 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-240
Cow position: chrX:24975508-24975736 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 0

Conread position: 2-240
Cow position: chrX:28313989-28314224 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-240
Cow position: chrX:38330946-38331181 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-240
Cow position: chrX:39185737-39185972 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-240
Cow position: chrX:48423499-48423734 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-243
Cow position: chrX:27749445-27749208 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-244
Cow position: chrX:30531466-30531229 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 15

Conread position: 2-245
Cow position: chrX:17291494-17291737 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 186, 15

Conread position: 2-247
Cow position: chrX:38852723-38852962 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 2-248
Cow position: chrX:10256578-10256337 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-248
Cow position: chrX:26728419-26728664 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 2-281
Cow position: chrX:16345483-16345762 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 185
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 14

Conread position: 2-298
Cow position: chrX:33803457-33803156 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 76, 15

Conread position: 2-300
Cow position: chrX:2486066-2485772 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-300
Cow position: chrX:24173601-24173310 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 2-303
Cow position: chrX:24467561-24467263 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-303
Cow position: chrX:27240296-27240600 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 205
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 73, 14

Conread position: 2-304
Cow position: chrX:12096682-12096385 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-306
Cow position: chrX:32331195-32331492 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:5408619-5408921 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:6454260-6454561 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:7097022-7097323 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:7677533-7677835 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 249, 15

Conread position: 2-307
Cow position: chrX:11566478-11566780 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:12360452-12360755 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 15

Conread position: 2-307
Cow position: chrX:12466059-12466360 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:14462873-14463179 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 20, 203

Conread position: 2-307
Cow position: chrX:22811450-22811751 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:24320708-24320410 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 15

Conread position: 2-307
Cow position: chrX:26506377-26506078 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 134, 15

Conread position: 2-307
Cow position: chrX:26617357-26617055 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:26974474-26974776 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:27760905-27761206 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:28513637-28513937 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:28588535-28588836 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:29912903-29913205 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:30052905-30052603 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:30196861-30197163 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:30836937-30837239 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:34761630-34761932 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:40591250-40591552 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-307
Cow position: chrX:42733430-42733731 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 2-307
Cow position: chrX:46297224-46297526 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-318
Cow position: chrX:22568453-22568138 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-318
Cow position: chrX:23135141-23135449 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-321
Cow position: chrX:12111094-12110771 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 217
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 15

Conread position: 2-324
Cow position: chrX:2932156-2931838 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 15, 0

Conread position: 2-324
Cow position: chrX:3361385-3361699 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-324
Cow position: chrX:6558414-6558734 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 15

Conread position: 2-324
Cow position: chrX:6869999-6869681 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-324
Cow position: chrX:15620968-15620650 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-324
Cow position: chrX:18451515-18451198 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-324
Cow position: chrX:21343958-21344275 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 221
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 260, 15

Conread position: 2-324
Cow position: chrX:36729948-36730265 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 2-333
Cow position: chrX:24006263-24005939 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 230
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 74, 14

Conread position: 2-340
Cow position: chrX:7486428-7486761 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 195, 15

Conread position: 2-344
Cow position: chrX:33538490-33538850 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 297

Conread position: 2-354
Cow position: chrX:7119080-7118727 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-354
Cow position: chrX:16074152-16074493 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 279, 15

Conread position: 2-354
Cow position: chrX:16735088-16735441 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 19

Conread position: 2-354
Cow position: chrX:23109326-23109676 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-354
Cow position: chrX:24809406-24809054 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-354
Cow position: chrX:42585499-42585158 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 15

Conread position: 2-358
Cow position: chrX:3372289-3371937 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 15

Conread position: 2-363
Cow position: chrX:5892792-5893154 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-365
Cow position: chrX:12001583-12001218 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-365
Cow position: chrX:13447834-13448199 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-365
Cow position: chrX:15346405-15346040 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-365
Cow position: chrX:30965665-30966030 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 15

Conread position: 2-365
Cow position: chrX:31605248-31605613 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-366
Cow position: chrX:37403459-37403093 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 15

Conread position: 2-370
Cow position: chrX:29760263-29760633 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 13

Conread position: 2-377
Cow position: chrX:16046711-16047090 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 200

Conread position: 2-384
Cow position: chrX:361889-361505 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-384
Cow position: chrX:3157182-3157566 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 15

Conread position: 2-384
Cow position: chrX:5866710-5867093 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 19

Conread position: 2-384
Cow position: chrX:7311557-7311941 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 15

Conread position: 2-384
Cow position: chrX:28518157-28517777 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 279, 14

Conread position: 2-384
Cow position: chrX:29777606-29777989 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 15

Conread position: 2-384
Cow position: chrX:33763908-33764292 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-384
Cow position: chrX:37958061-37958445 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 15

Conread position: 2-388
Cow position: chrX:12347441-12347832 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 15

Conread position: 2-398
Cow position: chrX:19109477-19109079 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-399
Cow position: chrX:1781469-1781869 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 15

Conread position: 2-399
Cow position: chrX:2274481-2274880 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 19

Conread position: 2-399
Cow position: chrX:6652507-6652109 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 14

Conread position: 2-399
Cow position: chrX:9018739-9018340 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 15

Conread position: 2-399
Cow position: chrX:11358501-11358102 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 15

Conread position: 2-399
Cow position: chrX:11672345-11672744 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 15

Conread position: 2-399
Cow position: chrX:15260055-15259656 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-399
Cow position: chrX:24413594-24413993 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 263
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 279, 15

Conread position: 2-399
Cow position: chrX:24509431-24509830 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-399
Cow position: chrX:27626919-27627318 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-399
Cow position: chrX:28058230-28057832 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 14

Conread position: 2-399
Cow position: chrX:30172144-30171747 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-399
Cow position: chrX:32039278-32038880 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-399
Cow position: chrX:43510980-43511382 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 15

Conread position: 2-400
Cow position: chrX:23572236-23571836 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-406
Cow position: chrX:21666027-21665627 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 15

Conread position: 2-408
Cow position: chrX:8591106-8591516 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 278
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 273, 14

Conread position: 2-409
Cow position: chrX:11145773-11145366 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 14

Conread position: 2-409
Cow position: chrX:14781782-14781373 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 200

Conread position: 2-409
Cow position: chrX:27997214-27997618 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-409
Cow position: chrX:31978277-31977874 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 12

Conread position: 2-410
Cow position: chrX:671445-671036 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 15

Conread position: 2-410
Cow position: chrX:2103969-2104374 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 15

Conread position: 2-410
Cow position: chrX:2160329-2160738 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 15

Conread position: 2-410
Cow position: chrX:2417919-2417511 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 14

Conread position: 2-410
Cow position: chrX:2559396-2558991 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:2664573-2664982 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 15

Conread position: 2-410
Cow position: chrX:3387670-3388079 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 15

Conread position: 2-410
Cow position: chrX:3417574-3417167 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 14

Conread position: 2-410
Cow position: chrX:3464512-3464105 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 15

Conread position: 2-410
Cow position: chrX:4343313-4343722 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:4622390-4621981 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:4869122-4869516 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 272
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:5123795-5123388 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-410
Cow position: chrX:5280289-5279881 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 15

Conread position: 2-410
Cow position: chrX:5306165-5306572 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 14

Conread position: 2-410
Cow position: chrX:5334255-5333848 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:5423502-5423093 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-410
Cow position: chrX:5646540-5646131 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 15

Conread position: 2-410
Cow position: chrX:6372745-6373153 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 15

Conread position: 2-410
Cow position: chrX:7444648-7445056 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 15

Conread position: 2-410
Cow position: chrX:7755465-7755874 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-410
Cow position: chrX:8434640-8434234 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 271
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 71, 81

Conread position: 2-410
Cow position: chrX:8483654-8484051 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 15

Conread position: 2-410
Cow position: chrX:8641352-8641760 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 15

Conread position: 2-410
Cow position: chrX:8782308-8782717 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:9128620-9129029 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 15

Conread position: 2-410
Cow position: chrX:9169050-9168641 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-410
Cow position: chrX:10351425-10351834 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 13

Conread position: 2-410
Cow position: chrX:10428104-10428512 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:10444851-10444441 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 15

Conread position: 2-410
Cow position: chrX:10915602-10916019 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:10923007-10922598 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 15

Conread position: 2-410
Cow position: chrX:10932237-10932645 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 14

Conread position: 2-410
Cow position: chrX:12145659-12146067 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-410
Cow position: chrX:13071040-13070629 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 146

Conread position: 2-410
Cow position: chrX:13091600-13091189 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 146

Conread position: 2-410
Cow position: chrX:13396687-13396279 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-410
Cow position: chrX:14122187-14121779 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:14134039-14134448 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:14801254-14800845 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 15

Conread position: 2-410
Cow position: chrX:15172963-15172560 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 271
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 300, 15

Conread position: 2-410
Cow position: chrX:15781145-15781554 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 15

Conread position: 2-410
Cow position: chrX:16359445-16359042 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:16465864-16466274 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 15

Conread position: 2-410
Cow position: chrX:17055133-17055542 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 19

Conread position: 2-410
Cow position: chrX:17783063-17783472 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 15

Conread position: 2-410
Cow position: chrX:17995023-17995432 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 15

Conread position: 2-410
Cow position: chrX:18024604-18025012 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-410
Cow position: chrX:18462411-18462003 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-410
Cow position: chrX:18656241-18655832 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-410
Cow position: chrX:19022745-19022336 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-410
Cow position: chrX:19473596-19473187 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 15

Conread position: 2-410
Cow position: chrX:19774916-19774507 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 15

Conread position: 2-410
Cow position: chrX:20021141-20021536 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 269
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 311, 15

Conread position: 2-410
Cow position: chrX:20098886-20099295 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 15

Conread position: 2-410
Cow position: chrX:20742550-20742959 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:21686183-21686587 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 184

Conread position: 2-410
Cow position: chrX:21768368-21768776 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 15

Conread position: 2-410
Cow position: chrX:22077891-22078300 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:22557065-22557474 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 15

Conread position: 2-410
Cow position: chrX:22609028-22608619 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 15

Conread position: 2-410
Cow position: chrX:22772219-22772628 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 15

Conread position: 2-410
Cow position: chrX:22888222-22888632 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 15

Conread position: 2-410
Cow position: chrX:23139877-23140282 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 19

Conread position: 2-410
Cow position: chrX:24769296-24768891 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:24969252-24968843 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:25276935-25276526 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 15

Conread position: 2-410
Cow position: chrX:25575523-25575932 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 15

Conread position: 2-410
Cow position: chrX:26229940-26229541 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 15

Conread position: 2-410
Cow position: chrX:26275703-26276112 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 15

Conread position: 2-410
Cow position: chrX:27305491-27305899 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 15

Conread position: 2-410
Cow position: chrX:27422717-27422309 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-410
Cow position: chrX:27759271-27759680 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-410
Cow position: chrX:28024827-28025234 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 269
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 285, 15

Conread position: 2-410
Cow position: chrX:28555871-28555462 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 15

Conread position: 2-410
Cow position: chrX:29169777-29169361 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 281
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 15

Conread position: 2-410
Cow position: chrX:29841605-29841196 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:29903306-29903716 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:30199428-30199019 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 15

Conread position: 2-410
Cow position: chrX:30822148-30822557 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-410
Cow position: chrX:31814325-31813916 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-410
Cow position: chrX:34519290-34519699 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-410
Cow position: chrX:35533415-35533824 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 13

Conread position: 2-410
Cow position: chrX:37061227-37060818 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 15

Conread position: 2-410
Cow position: chrX:37772870-37772460 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:37816153-37816561 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 14

Conread position: 2-410
Cow position: chrX:38051868-38051461 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 15

Conread position: 2-410
Cow position: chrX:38230703-38230294 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:39292179-39291788 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 15

Conread position: 2-410
Cow position: chrX:39714115-39714522 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-410
Cow position: chrX:42459736-42460153 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 15

Conread position: 2-410
Cow position: chrX:42591289-42591698 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 15

Conread position: 2-410
Cow position: chrX:45237030-45237439 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 15

Conread position: 2-416
Cow position: chrX:9011891-9012307 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-416
Cow position: chrX:18222977-18223392 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 15

Conread position: 2-419
Cow position: chrX:15531588-15531174 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-423
Cow position: chrX:36535171-36534750 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-435
Cow position: chrX:15091205-15090768 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 262
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 63, 15

Conread position: 2-444
Cow position: chrX:22612950-22613394 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 15

Conread position: 2-450
Cow position: chrX:25289115-25288665 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-468
Cow position: chrX:40269040-40269516 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 15

Conread position: 2-473
Cow position: chrX:2151368-2150901 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 15

Conread position: 2-473
Cow position: chrX:5289123-5288653 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-473
Cow position: chrX:8530104-8530574 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-473
Cow position: chrX:15114235-15114705 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 15

Conread position: 2-473
Cow position: chrX:27594616-27594148 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-474
Cow position: chrX:41790868-41790412 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 15

Conread position: 2-477
Cow position: chrX:30816705-30816231 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 15

Conread position: 2-477
Cow position: chrX:36195656-36196136 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-484
Cow position: chrX:1576699-1576217 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 19

Conread position: 2-484
Cow position: chrX:1976033-1975554 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 15

Conread position: 2-484
Cow position: chrX:5599414-5598932 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-484
Cow position: chrX:6196190-6195708 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-484
Cow position: chrX:6566638-6567120 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-484
Cow position: chrX:9085769-9085288 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-484
Cow position: chrX:11663742-11664224 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-484
Cow position: chrX:11715898-11715416 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 15

Conread position: 2-484
Cow position: chrX:12458261-12458746 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 200

Conread position: 2-484
Cow position: chrX:13384971-13385454 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-484
Cow position: chrX:16285775-16286255 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 15

Conread position: 2-484
Cow position: chrX:16478479-16478948 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 320
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 300, 15

Conread position: 2-484
Cow position: chrX:20032267-20031788 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 15

Conread position: 2-484
Cow position: chrX:27404381-27403900 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-484
Cow position: chrX:30752338-30752820 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-484
Cow position: chrX:34285500-34285017 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 15

Conread position: 2-484
Cow position: chrX:37764633-37764151 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 15

Conread position: 2-484
Cow position: chrX:38014658-38015140 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-484
Cow position: chrX:41488601-41488120 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-484
Cow position: chrX:44168746-44168263 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 15

Conread position: 2-490
Cow position: chrX:30940745-30941235 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-515
Cow position: chrX:47317970-47318483 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 2-540
Cow position: chrX:9153924-9154464 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 3-158
Cow position: chrX:16808271-16808117 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 14

Conread position: 3-174
Cow position: chrX:33799461-33799629 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 3-187
Cow position: chrX:44568557-44568742 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 87, 14

Conread position: 3-189
Cow position: chrX:25816690-25816505 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 14, 0

Conread position: 3-209
Cow position: chrX:38548975-38549181 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 96, 14

Conread position: 3-219
Cow position: chrX:43980310-43980529 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 14

Conread position: 3-237
Cow position: chrX:42530341-42530115 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 13, 0

Conread position: 3-249
Cow position: chrX:34222316-34222556 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 49, 0

Conread position: 3-303
Cow position: chrX:32871221-32870925 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 3-308
Cow position: chrX:37575875-37576183 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 75, 19

Conread position: 3-343
Cow position: chrX:19022992-19023342 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 201, 14

Conread position: 3-353
Cow position: chrX:29049540-29049876 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 14

Conread position: 3-353
Cow position: chrX:41192254-41192598 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 14

Conread position: 3-356
Cow position: chrX:5375934-5376288 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 14

Conread position: 3-356
Cow position: chrX:11455501-11455143 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 5

Conread position: 3-378
Cow position: chrX:28632912-28632546 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 3-385
Cow position: chrX:11819925-11820300 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 13

Conread position: 3-385
Cow position: chrX:32128429-32128036 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 14

Conread position: 3-399
Cow position: chrX:31261071-31260669 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 13

Conread position: 3-406
Cow position: chrX:31489077-31489485 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 19

Conread position: 3-410
Cow position: chrX:5320154-5319743 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 276
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 97, 19

Conread position: 3-410
Cow position: chrX:14458602-14458200 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 14

Conread position: 3-410
Cow position: chrX:45903742-45904151 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 199

Conread position: 3-421
Cow position: chrX:13648219-13647803 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 12

Conread position: 3-439
Cow position: chrX:20340325-20339890 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 84

Conread position: 3-484
Cow position: chrX:30981603-30981121 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 65

Conread position: 4-189
Cow position: chrX:29031945-29032135 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 13

Conread position: 4-259
Cow position: chrX:14030584-14030838 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 155
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 13, 0

Conread position: 4-279
Cow position: chrX:36219102-36219367 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 12, 0

Conread position: 4-307
Cow position: chrX:3096189-3095904 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 238, 13

Conread position: 4-307
Cow position: chrX:9651480-9651180 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 13

Conread position: 4-308
Cow position: chrX:13686283-13686582 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 13, 0

Conread position: 4-308
Cow position: chrX:41306068-41305766 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 71, 18

Conread position: 4-356
Cow position: chrX:14908577-14908933 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 13

Conread position: 4-376
Cow position: chrX:16706365-16706742 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 24

Conread position: 4-376
Cow position: chrX:16713763-16714136 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 24

Conread position: 4-382
Cow position: chrX:28866421-28866058 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 13

Conread position: 4-399
Cow position: chrX:7805942-7806338 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 13

Conread position: 4-399
Cow position: chrX:12290303-12290688 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 17

Conread position: 4-406
Cow position: chrX:23299521-23299924 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 13

Conread position: 4-410
Cow position: chrX:24424826-24424420 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 13

Conread position: 4-410
Cow position: chrX:26760002-26759596 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 13

Conread position: 4-410
Cow position: chrX:30159429-30159038 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 273
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 310, 13

Conread position: 4-410
Cow position: chrX:47607979-47608387 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 13

Conread position: 5-307
Cow position: chrX:3405789-3405491 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 17

Conread position: 5-307
Cow position: chrX:17980162-17980461 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 5-364
Cow position: chrX:2146879-2147261 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 249
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 12

Conread position: 5-364
Cow position: chrX:35832972-35833332 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 235
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 70, 11

Conread position: 5-397
Cow position: chrX:42470370-42469986 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 5-418
Cow position: chrX:7571470-7571883 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 12

Conread position: 5-465
Cow position: chrX:20582597-20583044 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 12

Conread position: 6-384
Cow position: chrX:37852707-37853079 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 11

Conread position: 6-410
Cow position: chrX:10528206-10527802 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 11

Conread position: 6-439
Cow position: chrX:29226044-29226478 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 11

Conread position: 7-205
Cow position: chrX:19929996-19930196 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 14

Conread position: 7-306
Cow position: chrX:18459892-18459592 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 201
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 9

Conread position: 7-306
Cow position: chrX:19595834-19596138 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 10

Conread position: 7-406
Cow position: chrX:26441211-26440813 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 10

Conread position: 7-410
Cow position: chrX:20321198-20320795 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 10

Conread position: 7-410
Cow position: chrX:46579286-46578882 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 10

Conread position: 8-210
Cow position: chrX:31338509-31338715 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 9

Conread position: 8-224
Cow position: chrX:18247914-18248122 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 7

Conread position: 8-298
Cow position: chrX:17082842-17082550 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 192
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 14

Conread position: 8-298
Cow position: chrX:25150757-25151052 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 9

Conread position: 8-303
Cow position: chrX:18769464-18769763 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 197
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 9

Conread position: 8-303
Cow position: chrX:41377181-41377469 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 194
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 7

Conread position: 8-306
Cow position: chrX:40322483-40322781 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 199
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 9

Conread position: 8-342
Cow position: chrX:47000084-46999766 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 222
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 98

Conread position: 8-355
Cow position: chrX:35633184-35632838 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 82, 9

Conread position: 8-364
Cow position: chrX:32623136-32623508 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 9

Conread position: 8-384
Cow position: chrX:29876486-29876128 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 258
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 9

Conread position: 8-399
Cow position: chrX:36840431-36840834 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 9

Conread position: 8-400
Cow position: chrX:14884392-14883999 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 9

Conread position: 8-406
Cow position: chrX:38094955-38094556 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 9

Conread position: 8-406
Cow position: chrX:48287861-48287484 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 9

Conread position: 8-410
Cow position: chrX:25337763-25338153 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 9

Conread position: 8-429
Cow position: chrX:30162578-30162988 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 9

Conread position: 8-474
Cow position: chrX:8899595-8900058 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 9

Conread position: 9-265
Cow position: chrX:6406915-6407163 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 189

Conread position: 10-221
Cow position: chrX:31385289-31385495 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 69, 183

Conread position: 10-275
Cow position: chrX:42226109-42225843 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 179
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 61, 7

Conread position: 11-353
Cow position: chrX:25966622-25966950 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 11

Conread position: 16-300
Cow position: chrX:39556238-39555958 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 16-307
Cow position: chrX:24102557-24102845 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 17-141
Cow position: chrX:11590044-11589921 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 17-189
Cow position: chrX:11855747-11855919 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 17-191
Cow position: chrX:45448234-45448408 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 17-192
Cow position: chrX:19019517-19019339 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 17-192
Cow position: chrX:22624030-22624209 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 17-192
Cow position: chrX:38940955-38941130 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 17-198
Cow position: chrX:39125892-39126073 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 153

Conread position: 17-209
Cow position: chrX:20167731-20167924 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 17-209
Cow position: chrX:44206863-44207049 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 17-211
Cow position: chrX:16284402-16284203 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 73, 193

Conread position: 17-211
Cow position: chrX:38934833-38935027 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 17-232
Cow position: chrX:43730613-43730401 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 21, 53

Conread position: 17-235
Cow position: chrX:30134910-30134692 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 17-240
Cow position: chrX:11975909-11975688 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 185, 0

Conread position: 17-240
Cow position: chrX:28542304-28542083 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 185, 0

Conread position: 17-246
Cow position: chrX:20538855-20539075 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 17-260
Cow position: chrX:22449492-22449738 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 191

Conread position: 17-273
Cow position: chrX:47654882-47655132 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 0

Conread position: 17-275
Cow position: chrX:42540176-42540437 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 200

Conread position: 17-297
Cow position: chrX:37544520-37544803 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 62, 181

Conread position: 17-298
Cow position: chrX:389082-389362 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 186
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 172

Conread position: 17-299
Cow position: chrX:21415666-21415950 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 216, 191

Conread position: 17-304
Cow position: chrX:6654739-6654439 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 67, 155

Conread position: 17-306
Cow position: chrX:7108491-7108786 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 133

Conread position: 17-307
Cow position: chrX:12810692-12810988 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 62, 201

Conread position: 17-307
Cow position: chrX:33614977-33615271 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 81

Conread position: 17-307
Cow position: chrX:47368670-47368383 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 59, 171

Conread position: 17-307
Cow position: chrX:48247259-48246971 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 61, 148

Conread position: 17-308
Cow position: chrX:9439097-9439392 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 192
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 189

Conread position: 17-308
Cow position: chrX:26878239-26878532 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 59, 189

Conread position: 17-308
Cow position: chrX:39288597-39288301 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 202

Conread position: 17-308
Cow position: chrX:41106439-41106142 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 137

Conread position: 17-331
Cow position: chrX:508582-508268 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 212
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 45

Conread position: 17-332
Cow position: chrX:5111840-5111530 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 206
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 187

Conread position: 17-348
Cow position: chrX:43217967-43218297 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 280

Conread position: 17-354
Cow position: chrX:6906244-6905902 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 62, 48

Conread position: 17-355
Cow position: chrX:25924964-25924619 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 61, 91

Conread position: 17-355
Cow position: chrX:33827460-33827104 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 8, 98

Conread position: 17-363
Cow position: chrX:44019274-44019625 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 240
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 189

Conread position: 17-376
Cow position: chrX:10916326-10916681 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 189

Conread position: 17-379
Cow position: chrX:21626382-21626007 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 251
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 60, 158

Conread position: 17-384
Cow position: chrX:3079009-3078640 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 185

Conread position: 17-385
Cow position: chrX:11083036-11082670 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 178

Conread position: 17-385
Cow position: chrX:26626116-26625726 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 369

Conread position: 17-386
Cow position: chrX:19674226-19674597 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 247
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 296, 185

Conread position: 17-389
Cow position: chrX:15596629-15596992 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 35

Conread position: 17-395
Cow position: chrX:45430441-45430062 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 192

Conread position: 17-399
Cow position: chrX:23047358-23047741 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 185

Conread position: 17-399
Cow position: chrX:24200773-24201145 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 261
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 61, 52

Conread position: 17-399
Cow position: chrX:34554313-34554684 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 137

Conread position: 17-399
Cow position: chrX:48370673-48371055 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 192

Conread position: 17-400
Cow position: chrX:38936269-38936656 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 231

Conread position: 17-405
Cow position: chrX:40545032-40544639 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 0

Conread position: 17-406
Cow position: chrX:15486047-15485659 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 169

Conread position: 17-406
Cow position: chrX:21592864-21593253 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 169

Conread position: 17-406
Cow position: chrX:27442974-27442590 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 169

Conread position: 17-406
Cow position: chrX:38967229-38967613 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 160

Conread position: 17-411
Cow position: chrX:42171721-42171327 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 172

Conread position: 17-421
Cow position: chrX:24288335-24287945 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 271
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 299, 168

Conread position: 17-466
Cow position: chrX:34564878-34565309 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 167

Conread position: 17-468
Cow position: chrX:13785800-13785335 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 296

Conread position: 17-474
Cow position: chrX:14599114-14599568 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 116

Conread position: 17-476
Cow position: chrX:31949352-31948902 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 121

Conread position: 18-178
Cow position: chrX:16689110-16689270 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 89, 95

Conread position: 18-209
Cow position: chrX:6203083-6203279 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 145

Conread position: 18-245
Cow position: chrX:35025383-35025605 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 111, 13

Conread position: 18-289
Cow position: chrX:48243873-48243603 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 88, 83

Conread position: 18-296
Cow position: chrX:17887945-17888213 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 131

Conread position: 18-306
Cow position: chrX:13460334-13460044 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 103

Conread position: 18-307
Cow position: chrX:14134760-14135047 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 173, 168

Conread position: 18-406
Cow position: chrX:18695347-18694959 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 187

Conread position: 18-410
Cow position: chrX:19495381-19494987 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 184

Conread position: 19-240
Cow position: chrX:22284088-22284316 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 19-361
Cow position: chrX:40581566-40581911 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 241
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 25

Conread position: 19-406
Cow position: chrX:12115621-12116011 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 189

Conread position: 19-406
Cow position: chrX:32419770-32420185 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 9

Conread position: 19-433
Cow position: chrX:1616477-1616049 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 195

Conread position: 20-298
Cow position: chrX:23034471-23034753 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 61, 183

Conread position: 20-343
Cow position: chrX:19772038-19771729 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 53, 168

Conread position: 20-384
Cow position: chrX:38442543-38442910 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 182

Conread position: 20-437
Cow position: chrX:21063879-21064279 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 18

Conread position: 20-445
Cow position: chrX:3653346-3653766 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 107

Conread position: 21-151
Cow position: chrX:36351455-36351586 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 21-204
Cow position: chrX:38641783-38641960 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 21-440
Cow position: chrX:13868279-13868705 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 86

Conread position: 22-247
Cow position: chrX:23819645-23819419 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 150
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 180

Conread position: 22-306
Cow position: chrX:41433835-41433559 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 22-308
Cow position: chrX:15341449-15341171 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 41

Conread position: 22-326
Cow position: chrX:19919008-19918708 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 197
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 44

Conread position: 22-361
Cow position: chrX:33172386-33172036 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 228
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 54, 190

Conread position: 23-184
Cow position: chrX:28878671-28878509 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 116, 63

Conread position: 23-211
Cow position: chrX:16416046-16416246 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 38

Conread position: 23-279
Cow position: chrX:24788132-24787883 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 0

Conread position: 23-293
Cow position: chrX:19540771-19540496 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 182
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 196

Conread position: 23-307
Cow position: chrX:14262252-14261960 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 194
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 96

Conread position: 23-350
Cow position: chrX:27446274-27446599 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 164

Conread position: 23-354
Cow position: chrX:18293517-18293843 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 227
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 62, 43

Conread position: 23-402
Cow position: chrX:11581521-11581906 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 92

Conread position: 23-419
Cow position: chrX:35409252-35409634 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 185

Conread position: 23-468
Cow position: chrX:32743122-32743563 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 185

Conread position: 24-308
Cow position: chrX:165471-165758 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 187
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 24

Conread position: 24-356
Cow position: chrX:25302155-25301836 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 237
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 133, 58

Conread position: 24-382
Cow position: chrX:45467635-45467273 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 210, 178

Conread position: 24-410
Cow position: chrX:2362083-2362472 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 177

Conread position: 24-410
Cow position: chrX:34663275-34662879 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 251
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 83, 224

Conread position: 25-236
Cow position: chrX:34006899-34007108 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 177, 0

Conread position: 25-303
Cow position: chrX:13923027-13923280 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 62, 0

Conread position: 25-304
Cow position: chrX:38577118-38577395 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 184

Conread position: 25-308
Cow position: chrX:4665037-4664750 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 53, 181

Conread position: 25-308
Cow position: chrX:16354766-16354481 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 191
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 82

Conread position: 25-332
Cow position: chrX:43007036-43006729 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 199
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 180

Conread position: 25-359
Cow position: chrX:1655068-1655398 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 211
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 262, 48

Conread position: 25-410
Cow position: chrX:32010617-32011004 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 177

Conread position: 26-240
Cow position: chrX:36373133-36373343 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 15, 0

Conread position: 26-312
Cow position: chrX:21495345-21495629 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 0

Conread position: 26-356
Cow position: chrX:3161437-3161099 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 183

Conread position: 26-367
Cow position: chrX:28097718-28098044 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 30, 60

Conread position: 26-405
Cow position: chrX:2479040-2478659 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 176

Conread position: 26-471
Cow position: chrX:47211265-47210815 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 184

Conread position: 27-350
Cow position: chrX:19741921-19741597 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 223
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 45, 263

Conread position: 28-151
Cow position: chrX:48021002-48020878 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 28-199
Cow position: chrX:14050395-14050566 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 28-307
Cow position: chrX:10992207-10992484 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 174, 0

Conread position: 28-406
Cow position: chrX:44737402-44737020 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 180

Conread position: 28-468
Cow position: chrX:42247592-42247157 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 62

Conread position: 29-219
Cow position: chrX:25568789-25568599 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 148, 165

Conread position: 29-341
Cow position: chrX:20888054-20887746 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 0

Conread position: 29-356
Cow position: chrX:48224598-48224270 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 181

Conread position: 29-410
Cow position: chrX:13971637-13971254 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 173

Conread position: 29-410
Cow position: chrX:29066041-29066410 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 253
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 8, 119

Conread position: 29-440
Cow position: chrX:42994204-42994615 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 179

Conread position: 29-468
Cow position: chrX:8796841-8797281 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 119

Conread position: 31-354
Cow position: chrX:39174621-39174301 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 31-355
Cow position: chrX:18990194-18989882 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 267, 11

Conread position: 31-355
Cow position: chrX:25329600-25329930 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 225
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 18

Conread position: 31-379
Cow position: chrX:16529597-16529948 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 208, 167

Conread position: 31-410
Cow position: chrX:828472-828860 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 257
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 88, 161

Conread position: 31-410
Cow position: chrX:2499747-2499370 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 253
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 278, 25

Conread position: 31-410
Cow position: chrX:15439057-15438680 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 255
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 161, 155

Conread position: 31-410
Cow position: chrX:34376546-34376914 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 67

Conread position: 33-308
Cow position: chrX:304784-305056 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 183
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 43, 157

Conread position: 33-406
Cow position: chrX:28105519-28105885 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 33-410
Cow position: chrX:10495827-10496206 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 169

Conread position: 33-410
Cow position: chrX:16289967-16289589 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 256
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 248, 26

Conread position: 34-181
Cow position: chrX:4177652-4177798 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 34-379
Cow position: chrX:25452145-25452485 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 34-395
Cow position: chrX:23583153-23583516 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 174

Conread position: 34-406
Cow position: chrX:42587834-42587463 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 174

Conread position: 35-197
Cow position: chrX:41083499-41083663 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 35-244
Cow position: chrX:38827045-38826836 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 167

Conread position: 35-312
Cow position: chrX:47984754-47985026 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 179
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 152

Conread position: 35-354
Cow position: chrX:15590276-15589958 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 252, 173

Conread position: 35-411
Cow position: chrX:47989356-47989731 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 240
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 258, 145

Conread position: 36-355
Cow position: chrX:37377662-37377348 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 262, 54

Conread position: 36-410
Cow position: chrX:12776389-12776014 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 164

Conread position: 36-410
Cow position: chrX:15504888-15505264 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 255
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 198, 166

Conread position: 36-410
Cow position: chrX:44557676-44558052 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 159, 150

Conread position: 36-466
Cow position: chrX:6413643-6414070 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 178

Conread position: 37-199
Cow position: chrX:45599301-45599139 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 37

Conread position: 37-211
Cow position: chrX:33519177-33519351 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 37-307
Cow position: chrX:29723049-29723318 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 171

Conread position: 37-400
Cow position: chrX:30543689-30543329 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 38, 19

Conread position: 37-400
Cow position: chrX:45674442-45674807 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 60, 117

Conread position: 37-416
Cow position: chrX:7054134-7053752 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 52

Conread position: 37-468
Cow position: chrX:10831914-10831465 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 171

Conread position: 38-189
Cow position: chrX:44839781-44839932 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 60

Conread position: 38-306
Cow position: chrX:47379868-47379603 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 0

Conread position: 38-307
Cow position: chrX:9593536-9593269 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 164, 0

Conread position: 38-307
Cow position: chrX:11904734-11904459 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 181

Conread position: 38-307
Cow position: chrX:36678074-36677804 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 42, 143

Conread position: 38-325
Cow position: chrX:19196919-19196636 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 154, 147

Conread position: 38-354
Cow position: chrX:24447400-24447718 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 243, 164

Conread position: 38-380
Cow position: chrX:22821013-22821358 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 164

Conread position: 38-406
Cow position: chrX:15147582-15147222 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 57

Conread position: 39-385
Cow position: chrX:24125462-24125124 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 262, 85

Conread position: 39-440
Cow position: chrX:48248419-48248826 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 167

Conread position: 40-384
Cow position: chrX:44907917-44908261 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 121

Conread position: 41-209
Cow position: chrX:17010700-17010532 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 41-248
Cow position: chrX:38668038-38667825 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 78

Conread position: 41-304
Cow position: chrX:37205315-37205590 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 241

Conread position: 41-308
Cow position: chrX:19636506-19636775 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 37, 106

Conread position: 41-368
Cow position: chrX:37299195-37299528 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 40, 22

Conread position: 41-371
Cow position: chrX:126387-126721 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 165

Conread position: 41-410
Cow position: chrX:23024305-23024674 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 255
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 56, 169

Conread position: 41-473
Cow position: chrX:21749856-21749432 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 99

Conread position: 42-355
Cow position: chrX:46448231-46447914 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 52, 144

Conread position: 42-384
Cow position: chrX:31450017-31449674 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 232
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 239, 30

Conread position: 42-416
Cow position: chrX:14409784-14409404 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 257
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 260, 144

Conread position: 43-364
Cow position: chrX:21795099-21795418 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 44

Conread position: 45-211
Cow position: chrX:46721184-46721014 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 163

Conread position: 45-219
Cow position: chrX:12671881-12671709 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 157, 0

Conread position: 45-240
Cow position: chrX:15561209-15561016 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 157, 0

Conread position: 45-269
Cow position: chrX:43199038-43199263 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 22

Conread position: 45-306
Cow position: chrX:13363879-13363613 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 172

Conread position: 45-307
Cow position: chrX:5112950-5112690 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 157, 0

Conread position: 45-308
Cow position: chrX:19847382-19847116 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 59

Conread position: 45-314
Cow position: chrX:40602570-40602835 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 157, 0

Conread position: 45-409
Cow position: chrX:32584205-32583840 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 44

Conread position: 45-410
Cow position: chrX:6655660-6655294 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 63

Conread position: 45-410
Cow position: chrX:20617191-20616824 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 247
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 257, 157

Conread position: 46-364
Cow position: chrX:32978650-32978331 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 157

Conread position: 46-410
Cow position: chrX:25741507-25741141 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 245
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 235, 156

Conread position: 46-450
Cow position: chrX:32309701-32310116 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 286
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 196

Conread position: 47-306
Cow position: chrX:22325680-22325941 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 77

Conread position: 47-367
Cow position: chrX:42508035-42507720 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 18

Conread position: 47-449
Cow position: chrX:7695372-7695761 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 101

Conread position: 48-410
Cow position: chrX:34401607-34401966 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 115

Conread position: 49-400
Cow position: chrX:25946232-25945873 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 250
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 87, 151

Conread position: 49-468
Cow position: chrX:38218328-38218739 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 149

Conread position: 51-384
Cow position: chrX:32188747-32188415 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 225, 157

Conread position: 52-399
Cow position: chrX:37489331-37489687 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 266

Conread position: 52-400
Cow position: chrX:21062830-21063180 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 239
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 229, 96

Conread position: 52-410
Cow position: chrX:34095174-34095534 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 257, 150

Conread position: 52-410
Cow position: chrX:43979231-43979593 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 150

Conread position: 52-474
Cow position: chrX:41526905-41526483 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 283
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 229, 88

Conread position: 53-410
Cow position: chrX:23235444-23235803 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 243
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 260, 149

Conread position: 54-367
Cow position: chrX:2300540-2300853 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 28, 260

Conread position: 54-410
Cow position: chrX:34192296-34192639 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 54-410
Cow position: chrX:37497832-37497474 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 240
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 248, 146

Conread position: 54-432
Cow position: chrX:25419549-25419163 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 264
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 12, 148

Conread position: 55-271
Cow position: chrX:8325876-8326088 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 153, 0

Conread position: 55-355
Cow position: chrX:16722201-16721890 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 44, 171

Conread position: 55-410
Cow position: chrX:5739597-5739240 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 239
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 226, 145

Conread position: 56-362
Cow position: chrX:31373195-31373486 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 56-406
Cow position: chrX:41198703-41199070 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 138, 274

Conread position: 56-409
Cow position: chrX:47386314-47385960 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 232
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 225, 137

Conread position: 56-438
Cow position: chrX:7718469-7718854 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 134

Conread position: 57-279
Cow position: chrX:40648283-40648501 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 9, 130

Conread position: 57-331
Cow position: chrX:44851709-44851983 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 189, 78

Conread position: 59-409
Cow position: chrX:7178528-7178866 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 131

Conread position: 59-484
Cow position: chrX:7509757-7510182 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 285
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 254, 143

Conread position: 60-197
Cow position: chrX:45228438-45228303 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 60-406
Cow position: chrX:25035765-25035414 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 124

Conread position: 61-279
Cow position: chrX:17691883-17692098 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 51, 0

Conread position: 61-406
Cow position: chrX:33855618-33855268 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 97

Conread position: 61-408
Cow position: chrX:41743535-41743879 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 137

Conread position: 62-356
Cow position: chrX:19290395-19290681 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 63-299
Cow position: chrX:22578536-22578306 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 63-356
Cow position: chrX:9096291-9096584 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 242, 137

Conread position: 63-410
Cow position: chrX:5292267-5291918 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 222
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 27

Conread position: 64-399
Cow position: chrX:45399875-45399533 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 224
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 9, 146

Conread position: 65-189
Cow position: chrX:11412161-11412037 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 65-320
Cow position: chrX:30141699-30141446 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 143, 0

Conread position: 65-399
Cow position: chrX:12179594-12179924 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 299, 135

Conread position: 65-469
Cow position: chrX:11718152-11717757 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 46

Conread position: 65-476
Cow position: chrX:11844612-11844208 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 121

Conread position: 66-320
Cow position: chrX:27616465-27616713 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 141, 0

Conread position: 66-437
Cow position: chrX:20697977-20697609 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 121

Conread position: 66-475
Cow position: chrX:47343919-47344328 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 147

Conread position: 67-324
Cow position: chrX:24966897-24967150 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 135, 0

Conread position: 69-189
Cow position: chrX:16542076-16541956 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 69-211
Cow position: chrX:46044650-46044790 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 69-354
Cow position: chrX:47362256-47361969 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 212, 133

Conread position: 69-468
Cow position: chrX:5118853-5118477 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 118

Conread position: 69-474
Cow position: chrX:31250022-31250419 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 71

Conread position: 70-191
Cow position: chrX:40184004-40183882 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 70-345
Cow position: chrX:10718141-10718407 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 132, 0

Conread position: 70-409
Cow position: chrX:30950159-30950500 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 199
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 243, 132

Conread position: 72-243
Cow position: chrX:11583510-11583344 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 72-303
Cow position: chrX:45945263-45945489 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 18, 117

Conread position: 72-307
Cow position: chrX:5640986-5640767 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 133, 0

Conread position: 72-307
Cow position: chrX:30863566-30863333 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 130, 0

Conread position: 72-320
Cow position: chrX:48490251-48490005 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 163, 113

Conread position: 73-400
Cow position: chrX:11806383-11806054 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 6, 82

Conread position: 75-221
Cow position: chrX:1823698-1823842 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 127, 0

Conread position: 75-303
Cow position: chrX:39548966-39549192 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 127, 0

Conread position: 75-307
Cow position: chrX:6828771-6829002 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 98, 128

Conread position: 75-307
Cow position: chrX:27982509-27982280 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 72, 68

Conread position: 75-331
Cow position: chrX:39386629-39386377 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 122, 0

Conread position: 75-365
Cow position: chrX:48328751-48328458 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 234, 127

Conread position: 75-399
Cow position: chrX:48205279-48204950 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 11, 135

Conread position: 75-400
Cow position: chrX:34502559-34502881 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 111

Conread position: 75-410
Cow position: chrX:15578005-15577668 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 224
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 223, 127

Conread position: 75-410
Cow position: chrX:29508419-29508750 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 220
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 227, 127

Conread position: 75-410
Cow position: chrX:36240031-36240368 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 227, 127

Conread position: 75-410
Cow position: chrX:44980401-44980064 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 221
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 230, 127

Conread position: 76-367
Cow position: chrX:25283503-25283224 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 76-406
Cow position: chrX:18999538-18999854 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 18

Conread position: 76-410
Cow position: chrX:45263430-45263096 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 201, 6

Conread position: 76-484
Cow position: chrX:43767899-43767491 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 271
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 237, 10

Conread position: 77-231
Cow position: chrX:37905657-37905809 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 133, 0

Conread position: 77-274
Cow position: chrX:11614359-11614554 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 134, 0

Conread position: 77-356
Cow position: chrX:6659013-6659294 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 61, 73

Conread position: 78-298
Cow position: chrX:33837228-33837441 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 79-356
Cow position: chrX:7381964-7382238 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 81-354
Cow position: chrX:21255679-21255953 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 217, 127

Conread position: 82-385
Cow position: chrX:1514784-1514462 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 250

Conread position: 83-405
Cow position: chrX:45089081-45089413 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 134, 184

Conread position: 84-405
Cow position: chrX:32171237-32170923 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 124

Conread position: 85-311
Cow position: chrX:21844280-21844507 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 137, 117

Conread position: 88-275
Cow position: chrX:24231470-24231290 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 88-298
Cow position: chrX:15304672-15304468 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 88-307
Cow position: chrX:39954889-39954672 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 120, 0

Conread position: 89-306
Cow position: chrX:36010242-36010033 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 143, 0

Conread position: 89-307
Cow position: chrX:27450380-27450155 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 72, 101

Conread position: 89-355
Cow position: chrX:17271638-17271371 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 187, 23

Conread position: 89-355
Cow position: chrX:25848565-25848834 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 120, 149

Conread position: 89-358
Cow position: chrX:44096203-44096474 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 178
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 241, 118

Conread position: 89-397
Cow position: chrX:37843370-37843679 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 122

Conread position: 89-399
Cow position: chrX:11561793-11562114 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 91, 160

Conread position: 89-406
Cow position: chrX:46771322-46770994 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 119

Conread position: 89-410
Cow position: chrX:33466268-33466578 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 223
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 15, 0

Conread position: 89-439
Cow position: chrX:2786896-2786556 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 238
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 311, 134

Conread position: 89-447
Cow position: chrX:43114823-43115160 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 49, 11

Conread position: 90-275
Cow position: chrX:2079591-2079402 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 90-385
Cow position: chrX:31443170-31442877 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 69

Conread position: 90-405
Cow position: chrX:20029899-20030221 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 136, 7

Conread position: 90-481
Cow position: chrX:35803465-35803863 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 269
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 219, 112

Conread position: 91-240
Cow position: chrX:14009001-14008854 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 111, 0

Conread position: 91-277
Cow position: chrX:40321279-40321465 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 91-279
Cow position: chrX:44983637-44983450 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 161, 119

Conread position: 91-307
Cow position: chrX:29024101-29024312 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 158, 108

Conread position: 91-307
Cow position: chrX:37079887-37079673 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 111, 0

Conread position: 91-324
Cow position: chrX:29877529-29877300 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 111, 0

Conread position: 91-324
Cow position: chrX:36820580-36820351 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 111, 0

Conread position: 91-353
Cow position: chrX:26883497-26883220 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 104, 0

Conread position: 91-354
Cow position: chrX:48160824-48160569 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 42, 36

Conread position: 91-385
Cow position: chrX:29048685-29048965 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 273, 21

Conread position: 91-399
Cow position: chrX:11860590-11860279 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 222, 111

Conread position: 91-399
Cow position: chrX:30899736-30899424 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 70, 112

Conread position: 91-406
Cow position: chrX:44396672-44396983 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 208
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 195, 87

Conread position: 91-410
Cow position: chrX:14846422-14846101 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 190, 111

Conread position: 91-410
Cow position: chrX:20038566-20038247 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 218, 109

Conread position: 91-410
Cow position: chrX:30538500-30538179 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 222, 111

Conread position: 91-410
Cow position: chrX:34333548-34333227 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 225, 111

Conread position: 91-410
Cow position: chrX:35612892-35612572 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 210, 114

Conread position: 91-410
Cow position: chrX:44387642-44387958 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 210
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 218, 94

Conread position: 91-411
Cow position: chrX:45932656-45932978 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 210
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 238, 123

Conread position: 91-415
Cow position: chrX:31436132-31436453 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 111

Conread position: 91-421
Cow position: chrX:28787023-28787338 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 219
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 309, 28

Conread position: 91-439
Cow position: chrX:9227332-9226977 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 248
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 120, 144

Conread position: 91-477
Cow position: chrX:48165175-48165561 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 263
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 143, 109

Conread position: 91-484
Cow position: chrX:39731165-39731559 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 263
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 211, 117

Conread position: 92-246
Cow position: chrX:47177942-47177790 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 92-356
Cow position: chrX:19689868-19690136 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 92, 39

Conread position: 92-356
Cow position: chrX:22873050-22873317 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 206, 110

Conread position: 92-370
Cow position: chrX:11981774-11982062 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 109, 155

Conread position: 92-377
Cow position: chrX:22567185-22567473 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 221, 110

Conread position: 92-405
Cow position: chrX:20945221-20945529 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 262, 116

Conread position: 93-298
Cow position: chrX:23876465-23876261 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 119

Conread position: 94-469
Cow position: chrX:47481455-47481826 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 62

Conread position: 95-207
Cow position: chrX:9417097-9416985 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 95-240
Cow position: chrX:20954260-20954404 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 138, 113

Conread position: 95-240
Cow position: chrX:45851587-45851731 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 70, 108

Conread position: 95-245
Cow position: chrX:38225739-38225887 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 95-297
Cow position: chrX:31839165-31839365 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 95-365
Cow position: chrX:36479588-36479861 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 218, 107

Conread position: 95-405
Cow position: chrX:32747314-32747648 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 160, 108

Conread position: 95-405
Cow position: chrX:44731256-44731562 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 203, 97

Conread position: 95-409
Cow position: chrX:11725611-11725291 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 108, 313

Conread position: 95-441
Cow position: chrX:41403617-41403981 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 99, 355

Conread position: 95-441
Cow position: chrX:41410165-41410529 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 99, 355

Conread position: 95-484
Cow position: chrX:24758041-24757651 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 258
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 218, 107

Conread position: 96-410
Cow position: chrX:23215764-23216080 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 177, 106

Conread position: 96-475
Cow position: chrX:47967257-47967639 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 104

Conread position: 97-307
Cow position: chrX:26754127-26753919 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 111, 0

Conread position: 97-384
Cow position: chrX:48310082-48309796 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 193, 23

Conread position: 98-399
Cow position: chrX:7645917-7646213 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 113

Conread position: 98-409
Cow position: chrX:36778064-36778380 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 111

Conread position: 98-410
Cow position: chrX:30686937-30686620 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 210
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 187, 104

Conread position: 99-399
Cow position: chrX:48227958-48227650 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 100-356
Cow position: chrX:2425461-2425203 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 199, 102

Conread position: 100-367
Cow position: chrX:40365134-40364863 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 61

Conread position: 100-405
Cow position: chrX:14924662-14924965 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 7

Conread position: 101-410
Cow position: chrX:40558014-40557713 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 110

Conread position: 101-418
Cow position: chrX:43527164-43527490 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 109

Conread position: 102-274
Cow position: chrX:34006479-34006308 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 109, 0

Conread position: 102-298
Cow position: chrX:11108464-11108270 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 102-353
Cow position: chrX:12852846-12852594 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 224, 89

Conread position: 102-385
Cow position: chrX:42855073-42855359 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 90

Conread position: 102-410
Cow position: chrX:13196308-13195998 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 207
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 179, 100

Conread position: 103-307
Cow position: chrX:23452934-23452732 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 103-384
Cow position: chrX:2812745-2812464 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 188
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 199, 9

Conread position: 105-320
Cow position: chrX:27458921-27459135 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 128, 95

Conread position: 105-395
Cow position: chrX:26619695-26619407 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 202, 34

Conread position: 105-405
Cow position: chrX:6234768-6234488 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 259, 34

Conread position: 105-410
Cow position: chrX:38007102-38006796 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 106

Conread position: 107-263
Cow position: chrX:30337227-30337382 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 106

Conread position: 108-334
Cow position: chrX:45421004-45420781 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 109-298
Cow position: chrX:8103423-8103236 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 102, 0

Conread position: 109-307
Cow position: chrX:30060861-30060665 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 109-421
Cow position: chrX:34454344-34454648 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 36

Conread position: 109-473
Cow position: chrX:29083795-29084154 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 238
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 189, 77

Conread position: 111-361
Cow position: chrX:33205320-33205073 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 100

Conread position: 112-288
Cow position: chrX:32214798-32214624 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 112-296
Cow position: chrX:23080966-23081144 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 112-447
Cow position: chrX:7508800-7509152 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 86, 20

Conread position: 112-484
Cow position: chrX:12850805-12851178 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 243
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 197, 90

Conread position: 113-399
Cow position: chrX:15008758-15008471 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 189, 89

Conread position: 113-399
Cow position: chrX:29844802-29844513 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 200, 89

Conread position: 113-405
Cow position: chrX:15545571-15545856 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 95

Conread position: 113-410
Cow position: chrX:29356261-29356560 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 189, 89

Conread position: 114-350
Cow position: chrX:36364893-36365132 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 91

Conread position: 114-379
Cow position: chrX:16783169-16783430 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 250, 86

Conread position: 114-401
Cow position: chrX:10306348-10306635 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 200, 72

Conread position: 114-406
Cow position: chrX:5638493-5638203 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 69

Conread position: 115-240
Cow position: chrX:10348158-10348035 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 117-279
Cow position: chrX:36311277-36311433 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 117-410
Cow position: chrX:27469976-27469681 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 200
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 198, 85

Conread position: 117-428
Cow position: chrX:9161266-9161574 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 250, 91

Conread position: 118-410
Cow position: chrX:42779446-42779153 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 197
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 163, 6

Conread position: 119-466
Cow position: chrX:34990721-34991059 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 241, 88

Conread position: 120-410
Cow position: chrX:3658373-3658081 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 189, 82

Conread position: 120-410
Cow position: chrX:28157168-28157466 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 173, 17

Conread position: 121-450
Cow position: chrX:33639650-33639985 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 35

Conread position: 122-300
Cow position: chrX:616720-616547 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 63, 0

Conread position: 122-410
Cow position: chrX:39667510-39667220 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 189
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 191, 80

Conread position: 122-429
Cow position: chrX:20376653-20376958 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 226, 70

Conread position: 123-406
Cow position: chrX:28845528-28845796 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 116

Conread position: 124-391
Cow position: chrX:14152530-14152260 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 179
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 185, 78

Conread position: 124-410
Cow position: chrX:39704390-39704667 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 192
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 240, 35

Conread position: 124-421
Cow position: chrX:45414616-45414317 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 88

Conread position: 124-450
Cow position: chrX:43101212-43101539 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 217
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 185, 62

Conread position: 125-406
Cow position: chrX:19188622-19188903 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 86

Conread position: 125-473
Cow position: chrX:42165761-42166109 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 225
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 184, 82

Conread position: 126-285
Cow position: chrX:37129010-37129163 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 126-399
Cow position: chrX:30021410-30021135 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 183
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 183, 5

Conread position: 126-410
Cow position: chrX:3895289-3895003 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 190
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 172, 76

Conread position: 126-410
Cow position: chrX:4404222-4404505 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 185
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 176, 76

Conread position: 129-287
Cow position: chrX:47854689-47854537 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 129-410
Cow position: chrX:12032661-12032944 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 184, 73

Conread position: 129-410
Cow position: chrX:21011632-21011348 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 185
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 62, 57

Conread position: 130-409
Cow position: chrX:6038231-6037950 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 183
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 103, 72

Conread position: 131-259
Cow position: chrX:170257-170131 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 131-353
Cow position: chrX:25618226-25617996 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 131-355
Cow position: chrX:45976561-45976791 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 173

Conread position: 131-393
Cow position: chrX:23061146-23061398 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 226, 77

Conread position: 131-406
Cow position: chrX:7350994-7351266 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 171, 55

Conread position: 131-433
Cow position: chrX:20709767-20710068 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 150, 62

Conread position: 132-303
Cow position: chrX:45410350-45410180 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 80

Conread position: 132-318
Cow position: chrX:48135187-48135005 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 132-353
Cow position: chrX:45465927-45466154 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 139

Conread position: 132-355
Cow position: chrX:38794418-38794643 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 133-473
Cow position: chrX:23451476-23451133 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 226
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 168, 11

Conread position: 134-298
Cow position: chrX:5919165-5919327 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 78

Conread position: 135-405
Cow position: chrX:23264741-23264468 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 160, 72

Conread position: 137-356
Cow position: chrX:5047199-5046989 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 192, 71

Conread position: 139-411
Cow position: chrX:33020186-33020453 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 140-363
Cow position: chrX:4483845-4484067 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 161

Conread position: 140-406
Cow position: chrX:1176273-1176014 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 160, 62

Conread position: 140-439
Cow position: chrX:35273045-35273357 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 92, 71

Conread position: 140-474
Cow position: chrX:14221784-14222107 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 224
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 124, 68

Conread position: 141-353
Cow position: chrX:41238661-41238455 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 141-468
Cow position: chrX:19015144-19015462 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 69

Conread position: 142-410
Cow position: chrX:35497789-35498059 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 177
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 167, 65

Conread position: 148-354
Cow position: chrX:6607118-6607336 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 99

Conread position: 148-397
Cow position: chrX:25237887-25238130 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 63

Conread position: 148-399
Cow position: chrX:24577856-24577602 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 167
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 154, 59

Conread position: 148-405
Cow position: chrX:18194622-18194880 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 152, 59

Conread position: 148-406
Cow position: chrX:35041931-35042190 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 164, 38

Conread position: 148-408
Cow position: chrX:48675785-48676041 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 60

Conread position: 149-364
Cow position: chrX:39347076-39346859 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 52

Conread position: 149-406
Cow position: chrX:4269357-4269096 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 32

Conread position: 149-469
Cow position: chrX:44835106-44834779 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 226
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 167, 62

Conread position: 150-285
Cow position: chrX:42928071-42927942 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 85, 61

Conread position: 150-355
Cow position: chrX:31556787-31556580 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 172, 61

Conread position: 150-402
Cow position: chrX:22482978-22482725 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 159, 61

Conread position: 150-440
Cow position: chrX:23497954-23497665 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 16, 63

Conread position: 151-406
Cow position: chrX:37836300-37836554 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 9, 36

Conread position: 151-433
Cow position: chrX:31294828-31294568 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 257, 47

Conread position: 154-471
Cow position: chrX:46723026-46722706 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 58

Conread position: 154-475
Cow position: chrX:48195326-48195003 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 160, 60

Conread position: 154-476
Cow position: chrX:46033003-46032694 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 167, 54

Conread position: 155-356
Cow position: chrX:16531716-16531910 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 8, 0

Conread position: 157-410
Cow position: chrX:754676-754931 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 135, 54

Conread position: 157-421
Cow position: chrX:16762490-16762752 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 86, 41

Conread position: 157-476
Cow position: chrX:2467598-2467917 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 47

Conread position: 157-484
Cow position: chrX:10293444-10293116 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 211
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 145, 50

Conread position: 158-307
Cow position: chrX:25587155-25587301 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 158-410
Cow position: chrX:42874697-42874952 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 53

Conread position: 159-410
Cow position: chrX:9997611-9997367 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 25

Conread position: 159-476
Cow position: chrX:8730799-8731127 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 144, 52

Conread position: 161-406
Cow position: chrX:8925428-8925666 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 86, 36

Conread position: 161-410
Cow position: chrX:26709326-26709577 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 120, 46

Conread position: 162-406
Cow position: chrX:35413353-35413586 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 191
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 191, 146

Conread position: 162-454
Cow position: chrX:30921908-30922200 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 23

Conread position: 162-473
Cow position: chrX:38102721-38102413 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 208
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 125, 46

Conread position: 165-345
Cow position: chrX:12314080-12314260 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 164, 42

Conread position: 165-397
Cow position: chrX:47191669-47191451 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 165-410
Cow position: chrX:2963776-2964022 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 163
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 116, 36

Conread position: 165-410
Cow position: chrX:7496975-7497208 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 166-342
Cow position: chrX:5856596-5856422 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 132, 45

Conread position: 166-384
Cow position: chrX:37416348-37416129 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 139, 45

Conread position: 166-476
Cow position: chrX:40647705-40648019 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 163, 45

Conread position: 167-384
Cow position: chrX:34270144-34270345 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 199, 19

Conread position: 167-391
Cow position: chrX:45436938-45437168 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 27

Conread position: 167-421
Cow position: chrX:12018003-12018275 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 127, 44

Conread position: 168-471
Cow position: chrX:10095755-10096060 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 146, 43

Conread position: 169-300
Cow position: chrX:45955911-45956039 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 171-385
Cow position: chrX:17541696-17541908 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 158, 40

Conread position: 171-475
Cow position: chrX:45404102-45403793 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 226
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 128, 40

Conread position: 172-406
Cow position: chrX:40183617-40183378 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 126, 39

Conread position: 172-468
Cow position: chrX:17725711-17726000 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 183, 38

Conread position: 173-397
Cow position: chrX:488224-488448 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 127, 28

Conread position: 175-278
Cow position: chrX:9771096-9770995 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 177-356
Cow position: chrX:45787393-45787566 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 178-410
Cow position: chrX:17042427-17042661 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 131, 231

Conread position: 180-402
Cow position: chrX:20151591-20151811 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 171, 21

Conread position: 180-474
Cow position: chrX:27509279-27508991 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 175, 31

Conread position: 181-348
Cow position: chrX:47247167-47247005 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 181-355
Cow position: chrX:30763677-30763509 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 181-406
Cow position: chrX:32020380-32020154 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 174, 30

Conread position: 182-384
Cow position: chrX:46382033-46381833 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 181, 25

Conread position: 182-480
Cow position: chrX:48652988-48652685 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 62

Conread position: 184-468
Cow position: chrX:7721725-7722017 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 23, 187

Conread position: 186-355
Cow position: chrX:48536919-48536748 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 114, 21

Conread position: 186-367
Cow position: chrX:46990040-46989865 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 123

Conread position: 186-402
Cow position: chrX:28878415-28878208 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 25

Conread position: 186-406
Cow position: chrX:41673850-41674075 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 90, 6

Conread position: 186-437
Cow position: chrX:25816149-25815910 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 222, 25

Conread position: 186-468
Cow position: chrX:24366082-24365796 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 195
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 25

Conread position: 187-477
Cow position: chrX:678820-678534 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 102, 25

Conread position: 188-321
Cow position: chrX:5556082-5555952 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 196-408
Cow position: chrX:45598849-45598634 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 105, 153

Conread position: 197-399
Cow position: chrX:17631048-17630848 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 47

Conread position: 197-406
Cow position: chrX:9416937-9416728 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 169, 162

Conread position: 197-410
Cow position: chrX:40788959-40789177 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 165

Conread position: 197-433
Cow position: chrX:35284375-35284615 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 14

Conread position: 198-332
Cow position: chrX:7710934-7710801 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 198-393
Cow position: chrX:6639881-6640082 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 198-399
Cow position: chrX:47757172-47756970 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 153, 190

Conread position: 198-406
Cow position: chrX:27772199-27771996 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 162, 48

Conread position: 198-406
Cow position: chrX:42011037-42011244 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 101, 41

Conread position: 198-410
Cow position: chrX:2383246-2383457 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 124, 45

Conread position: 198-440
Cow position: chrX:30833081-30832847 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 161, 35

Conread position: 198-468
Cow position: chrX:23514261-23513990 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 83, 60

Conread position: 199-307
Cow position: chrX:33519375-33519483 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 199-356
Cow position: chrX:2029148-2029308 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 99, 44

Conread position: 199-371
Cow position: chrX:38935039-38935218 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 199-392
Cow position: chrX:42499271-42499073 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 117, 168

Conread position: 199-399
Cow position: chrX:9855058-9855263 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 199-399
Cow position: chrX:9953899-9954104 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 199-400
Cow position: chrX:43049100-43049308 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 199-400
Cow position: chrX:44961505-44961708 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 199-409
Cow position: chrX:2206786-2206582 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 164, 124

Conread position: 199-410
Cow position: chrX:21672309-21672524 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 93, 207

Conread position: 199-410
Cow position: chrX:33493533-33493745 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 48

Conread position: 199-421
Cow position: chrX:27394256-27394039 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 127, 109

Conread position: 199-421
Cow position: chrX:42492752-42492534 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 155, 25

Conread position: 199-426
Cow position: chrX:25411598-25411829 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 89, 33

Conread position: 199-437
Cow position: chrX:7513274-7513510 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 166, 48

Conread position: 199-437
Cow position: chrX:47249030-47248787 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 39, 128

Conread position: 199-468
Cow position: chrX:619250-618977 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 95, 231

Conread position: 199-468
Cow position: chrX:23970147-23970404 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 156, 40

Conread position: 199-468
Cow position: chrX:26876123-26875856 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 166, 40

Conread position: 199-468
Cow position: chrX:37119357-37119621 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 179
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 205, 90

Conread position: 199-474
Cow position: chrX:21004442-21004715 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 127, 40

Conread position: 199-476
Cow position: chrX:34543545-34543817 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 76

Conread position: 200-402
Cow position: chrX:38642019-38642223 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 33

Conread position: 200-439
Cow position: chrX:17662838-17662592 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 97, 168

Conread position: 200-449
Cow position: chrX:22074559-22074805 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 210, 201

Conread position: 200-468
Cow position: chrX:16416267-16416534 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 98, 49

Conread position: 201-371
Cow position: chrX:21663069-21663245 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 108, 49

Conread position: 201-421
Cow position: chrX:38840648-38840872 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 99

Conread position: 201-440
Cow position: chrX:17888646-17888417 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 207, 79

Conread position: 202-410
Cow position: chrX:10302097-10302305 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 24

Conread position: 202-468
Cow position: chrX:27680164-27680423 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 157, 31

Conread position: 203-398
Cow position: chrX:19930419-19930608 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 6, 0

Conread position: 203-399
Cow position: chrX:9635419-9635227 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 148, 0

Conread position: 203-443
Cow position: chrX:19019348-19019100 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 36, 17

Conread position: 203-468
Cow position: chrX:11939162-11938910 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 157, 45

Conread position: 203-468
Cow position: chrX:27432157-27431893 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 153

Conread position: 203-469
Cow position: chrX:41167202-41166936 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 161, 36

Conread position: 203-481
Cow position: chrX:44053020-44053298 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 187
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 154, 161

Conread position: 204-406
Cow position: chrX:6690485-6690291 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 153, 104

Conread position: 204-468
Cow position: chrX:4768513-4768766 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 84

Conread position: 204-480
Cow position: chrX:40116188-40116454 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 162, 29

Conread position: 205-406
Cow position: chrX:20752027-20752220 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 145, 23

Conread position: 205-433
Cow position: chrX:11589828-11589592 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 205-438
Cow position: chrX:15814861-15815085 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 154, 83

Conread position: 206-399
Cow position: chrX:27514633-27514833 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 182

Conread position: 207-383
Cow position: chrX:4942985-4942812 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 102

Conread position: 207-406
Cow position: chrX:38549214-38549412 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 91, 155

Conread position: 207-408
Cow position: chrX:39938751-39938556 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 109, 22

Conread position: 208-410
Cow position: chrX:9201314-9201518 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 114, 31

Conread position: 208-467
Cow position: chrX:36975716-36975976 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 142, 168

Conread position: 208-476
Cow position: chrX:17231501-17231768 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 144, 108

Conread position: 209-339
Cow position: chrX:27176552-27176422 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 209-399
Cow position: chrX:877255-877070 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 30

Conread position: 209-400
Cow position: chrX:42339168-42338983 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 107, 0

Conread position: 209-402
Cow position: chrX:30963104-30962912 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 155, 98

Conread position: 209-433
Cow position: chrX:13382092-13382325 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 209-474
Cow position: chrX:6278738-6278467 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 83, 236

Conread position: 209-475
Cow position: chrX:48010362-48010636 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 89, 242

Conread position: 210-356
Cow position: chrX:5900226-5900370 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 106, 0

Conread position: 210-385
Cow position: chrX:14900952-14900779 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 210-385
Cow position: chrX:22821816-22821995 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 157

Conread position: 211-418
Cow position: chrX:42381330-42381122 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 143, 115

Conread position: 211-468
Cow position: chrX:35542661-35542920 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 87, 211

Conread position: 212-384
Cow position: chrX:18812029-18812196 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 212-385
Cow position: chrX:1728646-1728478 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 212-396
Cow position: chrX:13265849-13265668 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 152, 112

Conread position: 212-439
Cow position: chrX:11746613-11746849 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 97, 40

Conread position: 214-409
Cow position: chrX:48684450-48684257 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 137, 94

Conread position: 214-468
Cow position: chrX:11856202-11856455 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 150, 40

Conread position: 216-400
Cow position: chrX:46430087-46429899 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 148

Conread position: 216-465
Cow position: chrX:4750523-4750281 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 144, 32

Conread position: 216-476
Cow position: chrX:29509669-29509405 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 140, 232

Conread position: 217-399
Cow position: chrX:16324187-16324006 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 134, 13

Conread position: 218-406
Cow position: chrX:16541899-16541706 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 82, 20

Conread position: 219-395
Cow position: chrX:1503117-1503292 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 138, 20

Conread position: 219-402
Cow position: chrX:12980053-12979863 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 149

Conread position: 219-406
Cow position: chrX:46073044-46072855 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 112

Conread position: 220-400
Cow position: chrX:45015364-45015538 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 19, 87

Conread position: 220-421
Cow position: chrX:11633457-11633663 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 220-468
Cow position: chrX:23091660-23091895 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 189, 139

Conread position: 221-385
Cow position: chrX:37574636-37574794 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 139, 106

Conread position: 221-439
Cow position: chrX:29602053-29601828 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 88, 133

Conread position: 221-445
Cow position: chrX:36283125-36283361 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 229-409
Cow position: chrX:27174782-27174964 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 230-451
Cow position: chrX:29542430-29542204 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 136, 121

Conread position: 230-470
Cow position: chrX:841947-842184 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 125, 78

Conread position: 231-395
Cow position: chrX:26285770-26285935 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 8

Conread position: 233-440
Cow position: chrX:9425950-9425741 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 76, 133

Conread position: 233-466
Cow position: chrX:38852988-38853221 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 120

Conread position: 235-402
Cow position: chrX:16996300-16996463 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 120, 73

Conread position: 235-474
Cow position: chrX:46587611-46587853 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 116, 207

Conread position: 238-440
Cow position: chrX:17908487-17908286 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 122, 64

Conread position: 239-405
Cow position: chrX:37781320-37781147 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 56, 112

Conread position: 242-440
Cow position: chrX:1499470-1499667 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 115, 66

Conread position: 244-439
Cow position: chrX:36961438-36961643 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 198

Conread position: 244-476
Cow position: chrX:33000706-33000938 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 54, 89

Conread position: 244-476
Cow position: chrX:40809489-40809726 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 111, 205

Conread position: 252-406
Cow position: chrX:23785464-23785628 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 252-468
Cow position: chrX:31311836-31312054 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 176

Conread position: 255-410
Cow position: chrX:31256681-31256834 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 61

Conread position: 260-406
Cow position: chrX:7336645-7336794 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Show alignments to all cow chromosomes.