Cow genome map

Conread name: Tes1-TES01C090030

Conread position: 10-412
Cow position: chr10:10148790-10148374 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 94

Conread position: 12-466
Cow position: chr10:34654973-34655439 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 38

Conread position: 12-483
Cow position: chr10:21422024-21422499 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 59

Conread position: 13-196
Cow position: chr10:46886286-46886109 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 53

Conread position: 13-201
Cow position: chr10:60697493-60697676 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 52

Conread position: 13-208
Cow position: chr10:17150008-17149820 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 72, 16

Conread position: 13-231
Cow position: chr10:31803346-31803564 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 18, 24

Conread position: 13-236
Cow position: chr10:43586149-43586374 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 54

Conread position: 13-237
Cow position: chr10:58043991-58044218 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 59

Conread position: 13-240
Cow position: chr10:23346171-23346394 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 50

Conread position: 13-253
Cow position: chr10:34646315-34646550 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 43

Conread position: 13-257
Cow position: chr10:48407272-48407030 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 14

Conread position: 13-259
Cow position: chr10:37068285-37068522 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 16, 53

Conread position: 13-260
Cow position: chr10:22888679-22888926 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 54

Conread position: 13-261
Cow position: chr10:39124271-39124018 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 57

Conread position: 13-261
Cow position: chr10:46327826-46327577 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 17, 52

Conread position: 13-265
Cow position: chr10:10750110-10750368 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 17, 0

Conread position: 13-265
Cow position: chr10:27118827-27119082 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 52

Conread position: 13-265
Cow position: chr10:37295535-37295780 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 185

Conread position: 13-265
Cow position: chr10:61509811-61510056 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 17, 43

Conread position: 13-295
Cow position: chr10:19191889-19191615 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 17, 53

Conread position: 13-319
Cow position: chr10:52695591-52695914 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 17, 36

Conread position: 13-336
Cow position: chr10:10120328-10119996 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 235
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 72, 56

Conread position: 13-386
Cow position: chr10:35867881-35868250 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 17, 55

Conread position: 13-396
Cow position: chr10:7383481-7383844 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 255
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 23

Conread position: 13-396
Cow position: chr10:40163798-40164190 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 270
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 18, 60

Conread position: 13-397
Cow position: chr10:35792063-35791673 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 274
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 18, 157

Conread position: 13-418
Cow position: chr10:14947389-14946986 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 52

Conread position: 13-418
Cow position: chr10:20553318-20552906 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 32

Conread position: 13-419
Cow position: chr10:45371193-45370776 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 128

Conread position: 13-425
Cow position: chr10:55395843-55396227 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 276
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 17, 42

Conread position: 13-426
Cow position: chr10:6505487-6505072 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 43

Conread position: 13-426
Cow position: chr10:13586848-13586425 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 291
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 17, 194

Conread position: 13-428
Cow position: chr10:9575913-9576329 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 52

Conread position: 13-428
Cow position: chr10:30352986-30352553 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 13-428
Cow position: chr10:52296632-52296207 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 55

Conread position: 13-428
Cow position: chr10:67626863-67627276 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 290
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 17, 36

Conread position: 13-429
Cow position: chr10:31027505-31027931 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 219

Conread position: 13-438
Cow position: chr10:15817659-15818097 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 53

Conread position: 13-440
Cow position: chr10:67442985-67443408 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 299
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 17, 70

Conread position: 13-441
Cow position: chr10:6490014-6489560 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 58

Conread position: 13-441
Cow position: chr10:54504739-54504300 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 59

Conread position: 13-451
Cow position: chr10:32503567-32503138 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 212

Conread position: 13-454
Cow position: chr10:56828184-56828636 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 49

Conread position: 13-457
Cow position: chr10:28395170-28395603 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 44

Conread position: 13-457
Cow position: chr10:57786472-57786018 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 30

Conread position: 13-460
Cow position: chr10:63940907-63940455 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 304
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 17, 76

Conread position: 13-462
Cow position: chr10:6720042-6719577 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 122

Conread position: 13-462
Cow position: chr10:11966709-11967171 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 124

Conread position: 13-466
Cow position: chr10:22390732-22390269 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 52

Conread position: 13-466
Cow position: chr10:35731392-35731857 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 53

Conread position: 13-466
Cow position: chr10:49146646-49146207 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 304
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 62, 17

Conread position: 13-466
Cow position: chr10:52278860-52278393 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 53

Conread position: 13-477
Cow position: chr10:31400760-31401237 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 155

Conread position: 14-477
Cow position: chr10:20095902-20095417 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 396

Conread position: 15-363
Cow position: chr10:6665432-6665772 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 28

Conread position: 16-229
Cow position: chr10:2535700-2535487 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 39

Conread position: 16-237
Cow position: chr10:23390187-23390404 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 13

Conread position: 16-243
Cow position: chr10:24447997-24447769 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 36

Conread position: 16-261
Cow position: chr10:61922010-61922252 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 15, 51

Conread position: 16-350
Cow position: chr10:17022433-17022770 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 233
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 14, 51

Conread position: 16-409
Cow position: chr10:35245820-35246215 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 31

Conread position: 16-428
Cow position: chr10:13765031-13765454 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 49

Conread position: 16-466
Cow position: chr10:6852397-6851944 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 120

Conread position: 16-466
Cow position: chr10:30522931-30523384 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 80

Conread position: 16-466
Cow position: chr10:33215925-33215469 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 10

Conread position: 16-474
Cow position: chr10:33665975-33665506 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 31

Conread position: 17-203
Cow position: chr10:23310894-23311082 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 40

Conread position: 17-206
Cow position: chr10:40744240-40744059 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 22

Conread position: 18-457
Cow position: chr10:24756542-24756115 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 305
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 12, 47

Conread position: 18-459
Cow position: chr10:2857177-2856769 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 295
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 48

Conread position: 19-463
Cow position: chr10:17073237-17073677 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 49

Conread position: 21-466
Cow position: chr10:16598819-16598361 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 218

Conread position: 21-471
Cow position: chr10:53973973-53973520 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 117

Conread position: 23-261
Cow position: chr10:67288415-67288180 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 62, 42

Conread position: 27-323
Cow position: chr10:15309280-15309573 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 30, 39

Conread position: 27-386
Cow position: chr10:50558804-50559176 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 255
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 58, 29

Conread position: 27-446
Cow position: chr10:34607685-34607249 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 27-462
Cow position: chr10:27716716-27717162 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 174

Conread position: 28-408
Cow position: chr10:23506370-23506756 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 89

Conread position: 30-245
Cow position: chr10:3364065-3364280 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 39

Conread position: 34-466
Cow position: chr10:39875037-39875463 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 145

Conread position: 36-450
Cow position: chr10:21082492-21082084 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 274
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 22

Conread position: 36-466
Cow position: chr10:46195896-46195469 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 98

Conread position: 37-466
Cow position: chr10:34660132-34660540 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 38-233
Cow position: chr10:41676301-41676496 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 27

Conread position: 38-426
Cow position: chr10:53247894-53248297 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 271
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 158, 28

Conread position: 38-461
Cow position: chr10:31362105-31362533 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 25

Conread position: 38-466
Cow position: chr10:9675354-9675784 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 27

Conread position: 38-466
Cow position: chr10:21657531-21657097 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 36

Conread position: 39-260
Cow position: chr10:4151649-4151436 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 149

Conread position: 39-261
Cow position: chr10:49947771-49947989 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 27

Conread position: 39-450
Cow position: chr10:28776459-28776061 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 279
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 46, 25

Conread position: 40-359
Cow position: chr10:7817217-7816886 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 236
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 49, 284

Conread position: 42-462
Cow position: chr10:32584018-32583595 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 272
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 47, 23

Conread position: 44-265
Cow position: chr10:69997695-69997918 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 44-376
Cow position: chr10:37415895-37415546 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 170

Conread position: 44-402
Cow position: chr10:49455987-49456341 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 238
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 8, 105

Conread position: 44-428
Cow position: chr10:7366680-7367074 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 12

Conread position: 44-428
Cow position: chr10:11213218-11212822 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 113

Conread position: 44-434
Cow position: chr10:39228253-39227859 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 225

Conread position: 44-441
Cow position: chr10:51696850-51696451 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 92

Conread position: 44-457
Cow position: chr10:3999010-3998591 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 169

Conread position: 44-462
Cow position: chr10:5151450-5151018 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 20

Conread position: 44-466
Cow position: chr10:77473-77062 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 20

Conread position: 44-466
Cow position: chr10:1488936-1488519 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 285
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 40, 20

Conread position: 44-466
Cow position: chr10:9083408-9082971 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 300
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 36

Conread position: 44-466
Cow position: chr10:30360622-30360202 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 30

Conread position: 44-466
Cow position: chr10:51944470-51944035 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 93

Conread position: 44-477
Cow position: chr10:37818454-37818898 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 38

Conread position: 45-240
Cow position: chr10:53405579-53405385 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 155

Conread position: 45-288
Cow position: chr10:42451152-42451392 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 40, 78

Conread position: 45-411
Cow position: chr10:11081067-11080684 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 19

Conread position: 45-429
Cow position: chr10:15115719-15115324 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 155

Conread position: 45-466
Cow position: chr10:6530289-6529874 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 21

Conread position: 45-466
Cow position: chr10:8093214-8093645 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 11

Conread position: 46-201
Cow position: chr10:2695064-2694912 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 46-372
Cow position: chr10:28841059-28840718 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 36, 20

Conread position: 46-394
Cow position: chr10:60961036-60960683 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 36

Conread position: 47-245
Cow position: chr10:54819366-54819170 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 17

Conread position: 48-342
Cow position: chr10:35778802-35779110 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 24

Conread position: 49-237
Cow position: chr10:52827499-52827677 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 40, 15

Conread position: 49-405
Cow position: chr10:59572001-59571629 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 15

Conread position: 49-466
Cow position: chr10:53674924-53674494 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 15

Conread position: 52-236
Cow position: chr10:973229-973053 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 12

Conread position: 52-261
Cow position: chr10:6199118-6198907 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 38

Conread position: 54-466
Cow position: chr10:68829190-68829594 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 265
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 9

Conread position: 56-260
Cow position: chr10:6384624-6384425 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 142

Conread position: 56-261
Cow position: chr10:44421814-44422014 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 29, 13

Conread position: 56-441
Cow position: chr10:2613459-2613077 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 11

Conread position: 56-466
Cow position: chr10:11009501-11009095 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 271
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 28, 13

Conread position: 56-466
Cow position: chr10:12392520-12392924 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 288
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 89, 16

Conread position: 57-393
Cow position: chr10:37668064-37668416 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 325

Conread position: 57-466
Cow position: chr10:51861986-51862386 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 267
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 31

Conread position: 58-261
Cow position: chr10:8449596-8449387 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 58-261
Cow position: chr10:58451283-58451483 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 48

Conread position: 58-265
Cow position: chr10:6543817-6543607 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 58-434
Cow position: chr10:64285703-64286092 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 264
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 26, 169

Conread position: 58-457
Cow position: chr10:21447818-21448214 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 274
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 131

Conread position: 58-466
Cow position: chr10:22527810-22528228 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 128

Conread position: 58-466
Cow position: chr10:28104987-28105389 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 276
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 118

Conread position: 59-426
Cow position: chr10:27828411-27828042 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 26, 10

Conread position: 60-236
Cow position: chr10:37768392-37768215 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 146, 14

Conread position: 60-261
Cow position: chr10:22633536-22633736 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 25, 138

Conread position: 60-276
Cow position: chr10:33116862-33117076 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 14

Conread position: 60-298
Cow position: chr10:30613916-30613674 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 207

Conread position: 60-392
Cow position: chr10:29252253-29251907 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 66

Conread position: 60-471
Cow position: chr10:37529176-37529612 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 96

Conread position: 61-437
Cow position: chr10:8934559-8934186 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 24, 42

Conread position: 65-238
Cow position: chr10:17293347-17293523 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 66-276
Cow position: chr10:45624073-45624275 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 69

Conread position: 66-426
Cow position: chr10:13390964-13391342 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 164

Conread position: 68-275
Cow position: chr10:29379877-29380086 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 68

Conread position: 69-265
Cow position: chr10:48573599-48573795 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 180

Conread position: 69-426
Cow position: chr10:47789099-47788755 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 230
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 87

Conread position: 69-429
Cow position: chr10:41941483-41941872 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 69-460
Cow position: chr10:13311813-13311413 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 61

Conread position: 71-462
Cow position: chr10:57142137-57142543 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 277
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 257

Conread position: 74-373
Cow position: chr10:28152304-28152619 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 140, 154

Conread position: 74-428
Cow position: chr10:38014441-38014082 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 155

Conread position: 75-261
Cow position: chr10:60446807-60446621 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 10, 125

Conread position: 77-396
Cow position: chr10:61511252-61510933 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 210
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 130, 118

Conread position: 81-466
Cow position: chr10:42755390-42755014 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 256
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 95, 27

Conread position: 88-426
Cow position: chr10:23056017-23056367 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 314

Conread position: 88-466
Cow position: chr10:6252436-6252812 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 151

Conread position: 90-462
Cow position: chr10:23886402-23886769 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 260
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 172, 7

Conread position: 91-427
Cow position: chr10:65072060-65072400 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 223
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 98, 6

Conread position: 92-466
Cow position: chr10:9526048-9526405 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 95

Conread position: 92-466
Cow position: chr10:35902900-35903272 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 5

Conread position: 97-337
Cow position: chr10:66199659-66199905 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 163, 60

Conread position: 97-422
Cow position: chr10:57461408-57461081 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 218
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 106, 171

Conread position: 97-429
Cow position: chr10:15293317-15292980 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 150, 101

Conread position: 97-450
Cow position: chr10:15462543-15462185 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 219

Conread position: 98-327
Cow position: chr10:24781239-24780994 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 163, 0

Conread position: 99-387
Cow position: chr10:10964037-10963736 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 113, 85

Conread position: 99-418
Cow position: chr10:48255175-48255504 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 210
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 173, 99

Conread position: 99-422
Cow position: chr10:8923329-8922985 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 99-466
Cow position: chr10:61600194-61600544 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 40

Conread position: 102-461
Cow position: chr10:45770094-45769718 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 137

Conread position: 103-466
Cow position: chr10:1428085-1427710 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 99

Conread position: 104-411
Cow position: chr10:32417398-32417092 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 202
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 50, 96

Conread position: 107-424
Cow position: chr10:37287134-37287464 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 99, 25

Conread position: 107-464
Cow position: chr10:41408316-41407961 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 244
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 105, 93

Conread position: 111-465
Cow position: chr10:22520124-22520491 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 210

Conread position: 117-408
Cow position: chr10:19655937-19655638 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 197
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 63, 59

Conread position: 124-450
Cow position: chr10:28721810-28721478 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 229
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 74, 189

Conread position: 138-462
Cow position: chr10:20399212-20398882 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 70, 269

Conread position: 139-465
Cow position: chr10:55580264-55580585 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 215

Conread position: 145-399
Cow position: chr10:17584033-17584291 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 140

Conread position: 159-461
Cow position: chr10:19678863-19678545 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 301

Conread position: 161-429
Cow position: chr10:24871878-24871596 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 43, 229

Conread position: 162-466
Cow position: chr10:24971624-24971923 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 37, 161

Conread position: 173-441
Cow position: chr10:65803119-65803390 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 87, 26

Conread position: 206-429
Cow position: chr10:53057727-53057953 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 63, 118

Conread position: 211-466
Cow position: chr10:51779099-51779365 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 61, 244

Conread position: 263-466
Cow position: chr10:30746271-30746075 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 137, 46

Show alignments to all cow chromosomes.