Cow genome map

Conread name: Tes1-TES01C090030

Conread position: 3-264
Cow position:
Alignm length: 267
Alignm identity: 176
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 55

Conread position: 3-424
Cow position:
Alignm length: 436
Alignm identity: 293
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 27, 21

Conread position: 12-225
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 6, 36

Conread position: 12-419
Cow position:
Alignm length: 432
Alignm identity: 296
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 5, 19

Conread position: 12-433
Cow position:
Alignm length: 430
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 203

Conread position: 12-462
Cow position:
Alignm length: 471
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 59

Conread position: 13-208
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 24

Conread position: 13-220
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 13-221
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 17, 36

Conread position: 13-221
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 39

Conread position: 13-245
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 17, 43

Conread position: 13-245
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 46

Conread position: 13-256
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 53

Conread position: 13-259
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 20, 66

Conread position: 13-261
Cow position:
Alignm length: 257
Alignm identity: 177
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 43

Conread position: 13-265
Cow position:
Alignm length: 258
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 18, 241

Conread position: 13-276
Cow position:
Alignm length: 266
Alignm identity: 186
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 18, 30

Conread position: 13-280
Cow position:
Alignm length: 272
Alignm identity: 194
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 17, 52

Conread position: 13-390
Cow position:
Alignm length: 398
Alignm identity: 269
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 17, 59

Conread position: 13-401
Cow position:
Alignm length: 399
Alignm identity: 267
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 58

Conread position: 13-402
Cow position:
Alignm length: 408
Alignm identity: 281
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 17, 58

Conread position: 13-409
Cow position:
Alignm length: 402
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 55

Conread position: 13-420
Cow position:
Alignm length: 414
Alignm identity: 278
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 17, 24

Conread position: 13-440
Cow position:
Alignm length: 441
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 43

Conread position: 13-462
Cow position:
Alignm length: 456
Alignm identity: 303
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 17, 53

Conread position: 13-462
Cow position:
Alignm length: 458
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 53

Conread position: 13-466
Cow position:
Alignm length: 464
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 16

Conread position: 13-466
Cow position:
Alignm length: 478
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 54

Conread position: 13-477
Cow position:
Alignm length: 476
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 53

Conread position: 14-214
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 37

Conread position: 16-207
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 13, 49

Conread position: 16-266
Cow position:
Alignm length: 257
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 65

Conread position: 16-354
Cow position:
Alignm length: 361
Alignm identity: 247
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 14, 202

Conread position: 16-438
Cow position:
Alignm length: 445
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 51

Conread position: 17-322
Cow position:
Alignm length: 325
Alignm identity: 223
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 28

Conread position: 18-232
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 34

Conread position: 18-265
Cow position:
Alignm length: 252
Alignm identity: 186
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 11, 97

Conread position: 18-265
Cow position:
Alignm length: 249
Alignm identity: 186
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 66, 46

Conread position: 19-259
Cow position:
Alignm length: 249
Alignm identity: 165
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 19-261
Cow position:
Alignm length: 253
Alignm identity: 171
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 37

Conread position: 19-265
Cow position:
Alignm length: 250
Alignm identity: 166
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 33

Conread position: 19-265
Cow position:
Alignm length: 251
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 107

Conread position: 19-433
Cow position:
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 44

Conread position: 19-466
Cow position:
Alignm length: 471
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 61

Conread position: 21-265
Cow position:
Alignm length: 247
Alignm identity: 163
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 181

Conread position: 21-462
Cow position:
Alignm length: 451
Alignm identity: 287
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 10, 34

Conread position: 24-265
Cow position:
Alignm length: 249
Alignm identity: 165
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 213

Conread position: 26-466
Cow position:
Alignm length: 454
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 75

Conread position: 27-174
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 42

Conread position: 27-396
Cow position:
Alignm length: 375
Alignm identity: 237
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 153

Conread position: 27-462
Cow position:
Alignm length: 454
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 175

Conread position: 28-434
Cow position:
Alignm length: 428
Alignm identity: 292
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 57, 37

Conread position: 32-351
Cow position:
Alignm length: 331
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 33

Conread position: 32-381
Cow position:
Alignm length: 357
Alignm identity: 230
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 37

Conread position: 36-428
Cow position:
Alignm length: 404
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 79

Conread position: 38-327
Cow position:
Alignm length: 313
Alignm identity: 223
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 119, 0

Conread position: 44-196
Cow position:
Alignm length: 154
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 44-201
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 41, 20

Conread position: 44-205
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 13, 47

Conread position: 44-236
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 12

Conread position: 44-276
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 45, 22

Conread position: 44-362
Cow position:
Alignm length: 336
Alignm identity: 237
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 21

Conread position: 44-411
Cow position:
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 19

Conread position: 44-429
Cow position:
Alignm length: 395
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 19

Conread position: 44-466
Cow position:
Alignm length: 426
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 38

Conread position: 44-466
Cow position:
Alignm length: 433
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 19

Conread position: 45-466
Cow position:
Alignm length: 433
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 143

Conread position: 46-231
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 46-466
Cow position:
Alignm length: 436
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 18

Conread position: 47-418
Cow position:
Alignm length: 392
Alignm identity: 271
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 21, 122

Conread position: 49-428
Cow position:
Alignm length: 401
Alignm identity: 275
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 36, 14

Conread position: 49-457
Cow position:
Alignm length: 412
Alignm identity: 278
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 43, 15

Conread position: 54-466
Cow position:
Alignm length: 434
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 78

Conread position: 58-449
Cow position:
Alignm length: 397
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 56

Conread position: 58-466
Cow position:
Alignm length: 417
Alignm identity: 278
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 26, 7

Conread position: 59-391
Cow position:
Alignm length: 354
Alignm identity: 243
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 263

Conread position: 60-216
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 60-396
Cow position:
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 60-430
Cow position:
Alignm length: 385
Alignm identity: 259
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 156, 12

Conread position: 60-462
Cow position:
Alignm length: 416
Alignm identity: 280
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 169

Conread position: 66-408
Cow position:
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 86

Conread position: 66-466
Cow position:
Alignm length: 420
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 14

Conread position: 66-477
Cow position:
Alignm length: 415
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 70

Conread position: 69-211
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 69-261
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 69-420
Cow position:
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 238

Conread position: 69-466
Cow position:
Alignm length: 412
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 240

Conread position: 80-456
Cow position:
Alignm length: 386
Alignm identity: 248
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 175, 108

Conread position: 85-428
Cow position:
Alignm length: 357
Alignm identity: 240
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 39, 92

Conread position: 92-466
Cow position:
Alignm length: 380
Alignm identity: 253
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 164, 42

Conread position: 95-462
Cow position:
Alignm length: 379
Alignm identity: 247
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 120

Conread position: 96-261
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 97-263
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 103, 150

Conread position: 97-363
Cow position:
Alignm length: 291
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 236

Conread position: 97-369
Cow position:
Alignm length: 282
Alignm identity: 198
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 158, 33

Conread position: 99-429
Cow position:
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 23

Conread position: 99-464
Cow position:
Alignm length: 377
Alignm identity: 258
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 179, 112

Conread position: 106-415
Cow position:
Alignm length: 318
Alignm identity: 211
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 113

Conread position: 106-419
Cow position:
Alignm length: 330
Alignm identity: 228
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 74, 62

Conread position: 106-466
Cow position:
Alignm length: 362
Alignm identity: 246
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 86, 128

Conread position: 113-466
Cow position:
Alignm length: 370
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 296

Conread position: 125-421
Cow position:
Alignm length: 319
Alignm identity: 221
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 82, 228

Conread position: 129-394
Cow position:
Alignm length: 273
Alignm identity: 189
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 138, 76

Conread position: 135-356
Cow position:
Alignm length: 231
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 112, 67

Conread position: 193-466
Cow position:
Alignm length: 287
Alignm identity: 198
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 111

Conread position: 203-421
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 65

Show alignments to all cow chromosomes.