Cow genome map

Conread name: Tes1-TES01C090030

Conread position: 2-277
Cow position: chr14:15492458-15492741 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 15, 274

Conread position: 9-376
Cow position: chr14:1646308-1645931 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 266
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 8, 89

Conread position: 12-243
Cow position: chr14:41486389-41486148 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 131

Conread position: 12-466
Cow position: chr14:22988915-22989381 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 55

Conread position: 13-211
Cow position: chr14:29734480-29734283 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 72, 16

Conread position: 13-229
Cow position: chr14:47170468-47170256 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 17, 43

Conread position: 13-245
Cow position: chr14:24945615-24945375 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 13-273
Cow position: chr14:16524350-16524620 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 53

Conread position: 13-326
Cow position: chr14:40474444-40474755 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 207
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 69

Conread position: 13-359
Cow position: chr14:20110839-20110479 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 17, 34

Conread position: 13-376
Cow position: chr14:2959402-2959778 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 242
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 214

Conread position: 13-381
Cow position: chr14:13845871-13846249 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 23

Conread position: 13-426
Cow position: chr14:45677113-45677531 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 18

Conread position: 13-434
Cow position: chr14:33791075-33791507 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 13-456
Cow position: chr14:20640747-20640284 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 13-457
Cow position: chr14:39770338-39769885 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 51

Conread position: 13-460
Cow position: chr14:18345842-18345393 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 16

Conread position: 13-477
Cow position: chr14:13582873-13582414 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 305
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 69

Conread position: 13-477
Cow position: chr14:19188932-19189395 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 17

Conread position: 16-208
Cow position: chr14:43868191-43868387 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 20, 102

Conread position: 16-344
Cow position: chr14:20826376-20826698 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 41

Conread position: 16-359
Cow position: chr14:16760284-16760640 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 31

Conread position: 16-362
Cow position: chr14:13042644-13043005 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 14, 27

Conread position: 16-426
Cow position: chr14:33714789-33714380 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 80

Conread position: 16-462
Cow position: chr14:42155082-42154618 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 13

Conread position: 16-466
Cow position: chr14:41749871-41749417 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 43

Conread position: 17-466
Cow position: chr14:48426958-48427423 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 117

Conread position: 19-265
Cow position: chr14:4877339-4877098 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 30

Conread position: 19-457
Cow position: chr14:44557932-44557498 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 291
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 121

Conread position: 27-265
Cow position: chr14:48838489-48838729 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 176

Conread position: 27-424
Cow position: chr14:38144213-38143808 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 270
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 29, 74

Conread position: 27-429
Cow position: chr14:33751436-33751822 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 25

Conread position: 27-466
Cow position: chr14:16237616-16237160 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 314
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 72

Conread position: 28-240
Cow position: chr14:25225625-25225840 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 28-466
Cow position: chr14:27848084-27848547 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 37

Conread position: 32-237
Cow position: chr14:5557221-5557013 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 32-417
Cow position: chr14:37131565-37131957 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 33

Conread position: 38-261
Cow position: chr14:16550094-16549874 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 47, 34

Conread position: 39-462
Cow position: chr14:34096655-34096253 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 25

Conread position: 44-381
Cow position: chr14:33300617-33300945 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 41, 55

Conread position: 44-462
Cow position: chr14:26433325-26432898 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 21

Conread position: 44-465
Cow position: chr14:26442425-26441992 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 19

Conread position: 45-428
Cow position: chr14:5630077-5630473 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 263
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 24

Conread position: 45-429
Cow position: chr14:10078183-10078568 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 19

Conread position: 45-462
Cow position: chr14:25779017-25779439 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 288
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 11

Conread position: 47-261
Cow position: chr14:19359805-19360024 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 19

Conread position: 48-377
Cow position: chr14:28115269-28114924 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 36, 45

Conread position: 48-429
Cow position: chr14:41210772-41211168 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 16

Conread position: 48-466
Cow position: chr14:37883997-37883570 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 34

Conread position: 50-241
Cow position: chr14:25903452-25903635 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 19

Conread position: 50-438
Cow position: chr14:27592037-27591626 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 69

Conread position: 53-396
Cow position: chr14:24796512-24796145 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 37

Conread position: 53-461
Cow position: chr14:32371816-32371405 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 290
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 32, 11

Conread position: 56-420
Cow position: chr14:4990929-4991293 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 265
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 28, 8

Conread position: 56-463
Cow position: chr14:19863507-19863103 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 31

Conread position: 58-232
Cow position: chr14:41837944-41837771 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 7

Conread position: 58-398
Cow position: chr14:29632954-29632603 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 27, 46

Conread position: 60-230
Cow position: chr14:19487224-19487387 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 136

Conread position: 60-256
Cow position: chr14:4282577-4282383 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 71

Conread position: 60-326
Cow position: chr14:16256688-16256977 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 61-437
Cow position: chr14:19618820-19618447 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 249
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 254, 166

Conread position: 61-451
Cow position: chr14:9308160-9308558 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 99

Conread position: 61-463
Cow position: chr14:25404002-25403601 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 274
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 217, 20

Conread position: 63-471
Cow position: chr14:39775120-39774704 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 58

Conread position: 64-376
Cow position: chr14:40165358-40165679 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 219
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 202, 148

Conread position: 65-261
Cow position: chr14:29698427-29698228 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 129

Conread position: 66-256
Cow position: chr14:2038875-2038690 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 132

Conread position: 66-467
Cow position: chr14:39778687-39779101 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 391

Conread position: 69-388
Cow position: chr14:19372277-19372613 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 273

Conread position: 69-462
Cow position: chr14:8784139-8784518 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 276
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 20, 39

Conread position: 69-464
Cow position: chr14:35544566-35544171 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 66

Conread position: 70-265
Cow position: chr14:10631180-10630992 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 124

Conread position: 74-363
Cow position: chr14:8750020-8750319 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 15, 49

Conread position: 76-455
Cow position: chr14:11508289-11507907 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 123

Conread position: 77-462
Cow position: chr14:20010364-20009975 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 266
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 141, 121

Conread position: 83-407
Cow position: chr14:38338180-38337862 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 122, 22

Conread position: 90-426
Cow position: chr14:3564244-3564581 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 177, 105

Conread position: 91-429
Cow position: chr14:25385925-25385581 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 225
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 127, 38

Conread position: 92-380
Cow position: chr14:33309541-33309248 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 175, 102

Conread position: 97-237
Cow position: chr14:2345034-2345175 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 116, 0

Conread position: 97-303
Cow position: chr14:3162694-3162898 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 165, 141

Conread position: 99-289
Cow position: chr14:5633976-5633780 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 175

Conread position: 99-312
Cow position: chr14:24607936-24608163 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 117, 39

Conread position: 99-462
Cow position: chr14:27791513-27791873 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 138

Conread position: 100-462
Cow position: chr14:15990189-15990540 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 243
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 241, 28

Conread position: 102-240
Cow position: chr14:42480245-42480110 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 112, 49

Conread position: 106-343
Cow position: chr14:15313537-15313782 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 106-395
Cow position: chr14:47609606-47609310 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 149, 118

Conread position: 106-466
Cow position: chr14:8989600-8989247 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 107

Conread position: 106-466
Cow position: chr14:36437510-36437137 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 192

Conread position: 108-466
Cow position: chr14:6789362-6789719 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 236
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 30

Conread position: 108-466
Cow position: chr14:21201846-21201482 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 131

Conread position: 122-317
Cow position: chr14:15260801-15260995 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 94, 132

Conread position: 155-357
Cow position: chr14:45548737-45548539 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 158-466
Cow position: chr14:24991850-24992159 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 18, 26

Conread position: 177-466
Cow position: chr14:10912919-10912636 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 78, 116

Conread position: 201-461
Cow position: chr14:50027286-50027551 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 137

Conread position: 211-428
Cow position: chr14:44252989-44253204 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 101

Conread position: 261-466
Cow position: chr14:37640381-37640579 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.