Cow genome map


           Conread name:
           Tes1-TES01C090030
        

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               15, 274
               

               Conread position:
               9-376
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               266
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               8, 89
               

               Conread position:
               12-243
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               5, 131
               

               Conread position:
               12-466
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 55
               

               Conread position:
               13-211
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               13-229
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               17, 43
               

               Conread position:
               13-245
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               13-273
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 53
               

               Conread position:
               13-326
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 69
               

               Conread position:
               13-359
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               17, 34
               

               Conread position:
               13-376
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               15, 214
               

               Conread position:
               13-381
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 23
               

               Conread position:
               13-426
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 18
               

               Conread position:
               13-434
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               13-456
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 52
               

               Conread position:
               13-457
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 51
               

               Conread position:
               13-460
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               13-477
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               16, 69
               

               Conread position:
               13-477
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 17
               

               Conread position:
               16-208
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               20, 102
               

               Conread position:
               16-344
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               13, 41
               

               Conread position:
               16-359
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               16-362
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               254
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               16-426
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 80
               

               Conread position:
               16-462
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 13
               

               Conread position:
               16-466
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               17-466
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 117
               

               Conread position:
               19-265
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               12, 30
               

               Conread position:
               19-457
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               11, 121
               

               Conread position:
               27-265
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               47, 176
               

               Conread position:
               27-424
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               29, 74
               

               Conread position:
               27-429
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 25
               

               Conread position:
               27-466
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               314
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               52, 72
               

               Conread position:
               28-240
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               28-466
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 37
               

               Conread position:
               32-237
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               32-417
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 33
               

               Conread position:
               38-261
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               39-462
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 25
               

               Conread position:
               44-381
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               41, 55
               

               Conread position:
               44-462
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               44-465
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               45-428
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               39, 24
               

               Conread position:
               45-429
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 19
               

               Conread position:
               45-462
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               288
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               47-261
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               48-377
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               48-429
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               48-466
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 34
               

               Conread position:
               50-241
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               50-438
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 69
               

               Conread position:
               53-396
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               259
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               16, 37
               

               Conread position:
               53-461
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               290
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               32, 11
               

               Conread position:
               56-420
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               265
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               28, 8
               

               Conread position:
               56-463
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               58-232
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               58-398
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               249
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               27, 46
               

               Conread position:
               60-230
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               29, 136
               

               Conread position:
               60-256
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 71
               

               Conread position:
               60-326
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               61-437
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               254, 166
               

               Conread position:
               61-451
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 99
               

               Conread position:
               61-463
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               217, 20
               

               Conread position:
               63-471
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 58
               

               Conread position:
               64-376
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               202, 148
               

               Conread position:
               65-261
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               20, 129
               

               Conread position:
               66-256
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               12, 132
               

               Conread position:
               66-467
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 391
               

               Conread position:
               69-388
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 273
               

               Conread position:
               69-462
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               276
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               20, 39
               

               Conread position:
               69-464
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 66
               

               Conread position:
               70-265
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               15, 124
               

               Conread position:
               74-363
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               76-455
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 123
               

               Conread position:
               77-462
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               141, 121
               

               Conread position:
               83-407
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               122, 22
               

               Conread position:
               90-426
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               177, 105
               

               Conread position:
               91-429
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               127, 38
               

               Conread position:
               92-380
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               175, 102
               

               Conread position:
               97-237
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               97-303
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               165, 141
               

               Conread position:
               99-289
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 175
               

               Conread position:
               99-312
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               117, 39
               

               Conread position:
               99-462
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 138
               

               Conread position:
               100-462
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               241, 28
               

               Conread position:
               102-240
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               112, 49
               

               Conread position:
               106-343
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               106-395
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               149, 118
               

               Conread position:
               106-466
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 107
               

               Conread position:
               106-466
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 192
               

               Conread position:
               108-466
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 30
               

               Conread position:
               108-466
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 131
               

               Conread position:
               122-317
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               94, 132
               

               Conread position:
               155-357
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               158-466
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               177-466
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               78, 116
               

               Conread position:
               201-461
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 137
               

               Conread position:
               211-428
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 101
               

               Conread position:
               261-466
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               45, 0
               
Show alignments to all cow chromosomes.