Cow genome map
| Conread name: | Tes1-TES01C090030 |
| Conread position: | 11-235 |
| Cow position: | chr18:32252034-32252264 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 189 |
| Conread position: | 12-438 |
| Cow position: | chr18:55000609-55001048 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 107 |
| Conread position: | 13-167 |
| Cow position: | chr18:49602915-49603071 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 87 |
| Conread position: | 13-186 |
| Cow position: | chr18:50632318-50632489 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 13-197 |
| Cow position: | chr18:44917881-44917699 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 12 |
| Conread position: | 13-200 |
| Cow position: | chr18:4626663-4626846 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 13-236 |
| Cow position: | chr18:32189387-32189607 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 13-236 |
| Cow position: | chr18:49015243-49015030 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 184, 16 |
| Conread position: | 13-237 |
| Cow position: | chr18:8949670-8949890 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 13-237 |
| Cow position: | chr18:22568941-22569164 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 13-237 |
| Cow position: | chr18:35535020-35535247 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 13-244 |
| Cow position: | chr18:25598106-25598345 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 13-245 |
| Cow position: | chr18:35367075-35367291 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 13-256 |
| Cow position: | chr18:49038586-49038344 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 13-259 |
| Cow position: | chr18:8300152-8299897 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 108 |
| Conread position: | 13-261 |
| Cow position: | chr18:8170964-8171206 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 13-265 |
| Cow position: | chr18:34834623-34834366 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 17, 123 |
| Conread position: | 13-305 |
| Cow position: | chr18:28930514-28930810 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 15, 40 |
| Conread position: | 13-307 |
| Cow position: | chr18:15517047-15517347 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 13-362 |
| Cow position: | chr18:10977085-10977444 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 13-362 |
| Cow position: | chr18:33896284-33896656 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 256 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 13-371 |
| Cow position: | chr18:17390863-17391216 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 17, 117 |
| Conread position: | 13-386 |
| Cow position: | chr18:12023512-12023890 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 17, 39 |
| Conread position: | 13-418 |
| Cow position: | chr18:10891639-10891238 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 16, 42 |
| Conread position: | 13-419 |
| Cow position: | chr18:38985818-38985397 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 13-419 |
| Cow position: | chr18:42479453-42479870 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 296 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 13-429 |
| Cow position: | chr18:6310207-6309780 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 13-451 |
| Cow position: | chr18:4884392-4884836 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 13-457 |
| Cow position: | chr18:9366049-9365585 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 451 |
| Conread position: | 13-457 |
| Cow position: | chr18:29958046-29958473 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 13-466 |
| Cow position: | chr18:7650112-7649656 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 13-466 |
| Cow position: | chr18:10576230-10575776 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 13-466 |
| Cow position: | chr18:11791047-11790596 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 311 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 13-466 |
| Cow position: | chr18:12117726-12118181 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 13-466 |
| Cow position: | chr18:20126419-20125970 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 13-466 |
| Cow position: | chr18:44262750-44262283 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 13-466 |
| Cow position: | chr18:45903769-45904228 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 122 |
| Conread position: | 13-466 |
| Cow position: | chr18:55505531-55505068 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 54 |
| Conread position: | 13-477 |
| Cow position: | chr18:9974203-9974672 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 13-477 |
| Cow position: | chr18:28101757-28101279 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 16-261 |
| Cow position: | chr18:1571116-1571357 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 16-397 |
| Cow position: | chr18:42431968-42432360 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 277 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 14, 41 |
| Conread position: | 16-410 |
| Cow position: | chr18:11691282-11691691 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 110 |
| Conread position: | 16-438 |
| Cow position: | chr18:22789966-22790382 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 16-457 |
| Cow position: | chr18:6881232-6881664 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 50 |
| Conread position: | 16-457 |
| Cow position: | chr18:11779777-11779338 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 17-466 |
| Cow position: | chr18:11184062-11183606 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 18-242 |
| Cow position: | chr18:9040582-9040812 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 19-208 |
| Cow position: | chr18:38937941-38937755 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 10, 51 |
| Conread position: | 19-264 |
| Cow position: | chr18:24266282-24266533 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 19-265 |
| Cow position: | chr18:7109252-7109004 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 19-265 |
| Cow position: | chr18:19688149-19687896 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 19-265 |
| Cow position: | chr18:39623925-39623676 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 19-421 |
| Cow position: | chr18:15613743-15614136 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 276 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 19-429 |
| Cow position: | chr18:33159064-33158654 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 300 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 19-466 |
| Cow position: | chr18:39662902-39662441 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 11, 56 |
| Conread position: | 19-471 |
| Cow position: | chr18:55701540-55701986 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 286 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 11, 203 |
| Conread position: | 21-455 |
| Cow position: | chr18:43283637-43284076 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 295 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 23, 8 |
| Conread position: | 22-425 |
| Cow position: | chr18:31082230-31082616 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 27-259 |
| Cow position: | chr18:21740701-21740928 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 32-341 |
| Cow position: | chr18:45637308-45637608 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 95 |
| Conread position: | 32-418 |
| Cow position: | chr18:28923741-28924121 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 34 |
| Conread position: | 32-423 |
| Cow position: | chr18:21266612-21266214 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 266 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 32-457 |
| Cow position: | chr18:2849161-2849588 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 229 |
| Conread position: | 35-212 |
| Cow position: | chr18:47705338-47705162 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 30 |
| Conread position: | 36-357 |
| Cow position: | chr18:18592575-18592244 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 36-466 |
| Cow position: | chr18:29058399-29058828 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 37-460 |
| Cow position: | chr18:28657808-28658242 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 19 |
| Conread position: | 38-213 |
| Cow position: | chr18:23505431-23505257 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 26 |
| Conread position: | 38-457 |
| Cow position: | chr18:56181354-56181782 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 28 |
| Conread position: | 39-243 |
| Cow position: | chr18:53038931-53038724 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 39-386 |
| Cow position: | chr18:16997353-16997025 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 31, 43 |
| Conread position: | 39-445 |
| Cow position: | chr18:56184036-56183623 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 163 |
| Conread position: | 39-466 |
| Cow position: | chr18:55692915-55692486 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 291 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 178, 29 |
| Conread position: | 40-417 |
| Cow position: | chr18:25282456-25282843 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 44, 7 |
| Conread position: | 42-372 |
| Cow position: | chr18:33008166-33007813 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 247 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 43-275 |
| Cow position: | chr18:52402880-52403106 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 75 |
| Conread position: | 44-261 |
| Cow position: | chr18:49841373-49841158 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 54 |
| Conread position: | 44-428 |
| Cow position: | chr18:25647153-25647548 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 44-433 |
| Cow position: | chr18:46727684-46727289 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 44-462 |
| Cow position: | chr18:38607315-38606904 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 44-466 |
| Cow position: | chr18:30360052-30360456 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 24, 134 |
| Conread position: | 45-403 |
| Cow position: | chr18:34526999-34527376 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 268 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 28, 71 |
| Conread position: | 45-426 |
| Cow position: | chr18:5578393-5578007 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 11 |
| Conread position: | 46-258 |
| Cow position: | chr18:7077048-7076841 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 46-261 |
| Cow position: | chr18:36201534-36201748 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 114 |
| Conread position: | 46-415 |
| Cow position: | chr18:36230635-36230997 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 270 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 46-421 |
| Cow position: | chr18:47517109-47517500 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 47-429 |
| Cow position: | chr18:39875169-39875560 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 48-211 |
| Cow position: | chr18:47547895-47548058 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 48-224 |
| Cow position: | chr18:52414057-52413879 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 48-261 |
| Cow position: | chr18:31711470-31711686 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 48-311 |
| Cow position: | chr18:49017583-49017332 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 48-353 |
| Cow position: | chr18:42431518-42431829 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 20, 278 |
| Conread position: | 48-441 |
| Cow position: | chr18:38687170-38686783 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 48-456 |
| Cow position: | chr18:55119968-55119548 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 48-462 |
| Cow position: | chr18:37002722-37002299 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 48-466 |
| Cow position: | chr18:37023460-37023892 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 34 |
| Conread position: | 48-471 |
| Cow position: | chr18:23766318-23766763 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 30 |
| Conread position: | 49-265 |
| Cow position: | chr18:48713642-48713425 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 100 |
| Conread position: | 49-466 |
| Cow position: | chr18:47512095-47511658 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 50-343 |
| Cow position: | chr18:1954501-1954808 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 56-265 |
| Cow position: | chr18:51190515-51190715 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 56-457 |
| Cow position: | chr18:4539798-4540199 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 100 |
| Conread position: | 58-262 |
| Cow position: | chr18:51594722-51594924 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 31, 140 |
| Conread position: | 59-435 |
| Cow position: | chr18:12242355-12241984 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 80 |
| Conread position: | 59-443 |
| Cow position: | chr18:12113285-12113682 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 271 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 26, 6 |
| Conread position: | 60-237 |
| Cow position: | chr18:17660480-17660654 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 25, 139 |
| Conread position: | 60-413 |
| Cow position: | chr18:30794506-30794149 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 75 |
| Conread position: | 60-423 |
| Cow position: | chr18:50082177-50082540 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 139 |
| Conread position: | 60-448 |
| Cow position: | chr18:20641416-20641803 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 127 |
| Conread position: | 60-466 |
| Cow position: | chr18:23630527-23630911 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 75 |
| Conread position: | 62-395 |
| Cow position: | chr18:29760105-29759785 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 23, 116 |
| Conread position: | 62-441 |
| Cow position: | chr18:44483696-44484070 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 63-264 |
| Cow position: | chr18:18369285-18369486 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 63-466 |
| Cow position: | chr18:44801812-44802219 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 150 |
| Conread position: | 63-466 |
| Cow position: | chr18:45571089-45570688 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 66-206 |
| Cow position: | chr18:25006419-25006560 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 66-256 |
| Cow position: | chr18:2146505-2146701 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 181 |
| Conread position: | 66-424 |
| Cow position: | chr18:33299978-33299603 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 239 |
| Conread position: | 66-433 |
| Cow position: | chr18:7952277-7951898 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 274 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 66-438 |
| Cow position: | chr18:50637399-50637772 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 66-466 |
| Cow position: | chr18:49100294-49100705 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 389 |
| Conread position: | 69-259 |
| Cow position: | chr18:52406763-52406583 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 16, 61 |
| Conread position: | 69-425 |
| Cow position: | chr18:11685053-11684694 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 269 |
| Conread position: | 71-466 |
| Cow position: | chr18:13507671-13508062 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 73-434 |
| Cow position: | chr18:29356557-29356935 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 259 |
| Conread position: | 74-252 |
| Cow position: | chr18:43796889-43797065 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 121 |
| Conread position: | 77-461 |
| Cow position: | chr18:9029672-9029287 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 111 |
| Conread position: | 77-466 |
| Cow position: | chr18:12775722-12776109 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 223 |
| Conread position: | 91-466 |
| Cow position: | chr18:19193317-19193681 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 188, 120 |
| Conread position: | 92-466 |
| Cow position: | chr18:5487289-5486915 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 42 |
| Conread position: | 97-261 |
| Cow position: | chr18:16686293-16686457 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 115, 100 |
| Conread position: | 97-386 |
| Cow position: | chr18:22055832-22056111 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 118, 103 |
| Conread position: | 97-428 |
| Cow position: | chr18:51212225-51211883 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 25 |
| Conread position: | 97-462 |
| Cow position: | chr18:15880802-15881186 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 202 |
| Conread position: | 97-466 |
| Cow position: | chr18:40759249-40758880 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 103 |
| Conread position: | 98-441 |
| Cow position: | chr18:4381335-4380983 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 118, 237 |
| Conread position: | 99-465 |
| Cow position: | chr18:11618508-11618147 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 102-466 |
| Cow position: | chr18:30248102-30248464 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 103-265 |
| Cow position: | chr18:42751567-42751736 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 53, 5 |
| Conread position: | 103-406 |
| Cow position: | chr18:32773915-32773602 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 93, 81 |
| Conread position: | 103-462 |
| Cow position: | chr18:45961235-45961591 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 105-244 |
| Cow position: | chr18:42954030-42954169 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 129 |
| Conread position: | 106-460 |
| Cow position: | chr18:7966275-7965937 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 88, 130 |
| Conread position: | 106-462 |
| Cow position: | chr18:51827314-51826959 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 102, 92 |
| Conread position: | 106-466 |
| Cow position: | chr18:4927102-4926738 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 151, 92 |
| Conread position: | 106-466 |
| Cow position: | chr18:13172499-13172861 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 131 |
| Conread position: | 106-466 |
| Cow position: | chr18:43950859-43950503 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 86, 163 |
| Conread position: | 106-483 |
| Cow position: | chr18:51405873-51406249 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 91, 79 |
| Conread position: | 107-275 |
| Cow position: | chr18:34219891-34220056 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 114-466 |
| Cow position: | chr18:8104914-8105279 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 28, 223 |
| Conread position: | 122-418 |
| Cow position: | chr18:33407634-33407322 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 146, 288 |
| Conread position: | 122-465 |
| Cow position: | chr18:14048726-14048377 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 231 |
| Conread position: | 124-260 |
| Cow position: | chr18:29991495-29991633 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 139-359 |
| Cow position: | chr18:41025146-41025357 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 190-462 |
| Cow position: | chr18:37702905-37703182 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 23, 123 |
| Conread position: | 211-471 |
| Cow position: | chr18:13293441-13293168 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 28, 105 |
| Conread position: | 257-428 |
| Cow position: | chr18:11680592-11680421 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 265-462 |
| Cow position: | chr18:35535423-35535617 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 158 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.