Cow genome map

Conread name: Tes1-TES01C090030

Conread position: 12-441
Cow position:
Alignm length: 455
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 332

Conread position: 12-465
Cow position:
Alignm length: 478
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 283

Conread position: 12-466
Cow position:
Alignm length: 465
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 56

Conread position: 12-466
Cow position:
Alignm length: 465
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 45

Conread position: 13-189
Cow position:
Alignm length: 178
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 38

Conread position: 13-199
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 181

Conread position: 13-205
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 118

Conread position: 13-207
Cow position:
Alignm length: 196
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 14

Conread position: 13-317
Cow position:
Alignm length: 325
Alignm identity: 231
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 17, 44

Conread position: 13-327
Cow position:
Alignm length: 323
Alignm identity: 215
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 17, 29

Conread position: 13-374
Cow position:
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 43

Conread position: 13-397
Cow position:
Alignm length: 407
Alignm identity: 271
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 17, 53

Conread position: 13-402
Cow position:
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 53

Conread position: 13-427
Cow position:
Alignm length: 437
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 87

Conread position: 13-427
Cow position:
Alignm length: 433
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 27

Conread position: 13-428
Cow position:
Alignm length: 433
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 54

Conread position: 13-457
Cow position:
Alignm length: 464
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 399

Conread position: 13-465
Cow position:
Alignm length: 470
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 50

Conread position: 13-466
Cow position:
Alignm length: 464
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 18

Conread position: 13-466
Cow position:
Alignm length: 457
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 37

Conread position: 13-466
Cow position:
Alignm length: 468
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 53

Conread position: 13-466
Cow position:
Alignm length: 466
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 70

Conread position: 13-466
Cow position:
Alignm length: 471
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 46

Conread position: 13-466
Cow position:
Alignm length: 464
Alignm identity: 303
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 17, 44

Conread position: 13-472
Cow position:
Alignm length: 484
Alignm identity: 326
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 76

Conread position: 13-474
Cow position:
Alignm length: 476
Alignm identity: 310
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 164

Conread position: 16-175
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 43

Conread position: 16-261
Cow position:
Alignm length: 250
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 16-298
Cow position:
Alignm length: 297
Alignm identity: 217
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 14, 49

Conread position: 16-319
Cow position:
Alignm length: 322
Alignm identity: 225
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 40

Conread position: 16-383
Cow position:
Alignm length: 375
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 27

Conread position: 16-441
Cow position:
Alignm length: 446
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 50

Conread position: 16-466
Cow position:
Alignm length: 464
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 29

Conread position: 19-380
Cow position:
Alignm length: 378
Alignm identity: 252
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 11, 58

Conread position: 19-419
Cow position:
Alignm length: 419
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 28

Conread position: 19-465
Cow position:
Alignm length: 456
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 83

Conread position: 21-240
Cow position:
Alignm length: 224
Alignm identity: 152
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 178

Conread position: 21-462
Cow position:
Alignm length: 468
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 43

Conread position: 22-466
Cow position:
Alignm length: 454
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 5

Conread position: 35-425
Cow position:
Alignm length: 396
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 47

Conread position: 38-206
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 27

Conread position: 38-265
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 47, 157

Conread position: 38-466
Cow position:
Alignm length: 433
Alignm identity: 282
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 47, 20

Conread position: 39-271
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 164

Conread position: 42-245
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 23

Conread position: 44-256
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 170, 10

Conread position: 44-422
Cow position:
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 14

Conread position: 44-429
Cow position:
Alignm length: 399
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 25

Conread position: 44-466
Cow position:
Alignm length: 442
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 20

Conread position: 45-240
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 45-462
Cow position:
Alignm length: 430
Alignm identity: 280
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 24, 37

Conread position: 46-261
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 152, 0

Conread position: 46-466
Cow position:
Alignm length: 432
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 183

Conread position: 46-466
Cow position:
Alignm length: 424
Alignm identity: 273
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 40, 98

Conread position: 48-335
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 36, 21

Conread position: 48-372
Cow position:
Alignm length: 344
Alignm identity: 231
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 6, 259

Conread position: 48-398
Cow position:
Alignm length: 371
Alignm identity: 258
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 23, 125

Conread position: 49-215
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 36, 17

Conread position: 49-466
Cow position:
Alignm length: 444
Alignm identity: 291
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 39, 192

Conread position: 49-466
Cow position:
Alignm length: 424
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 7

Conread position: 56-466
Cow position:
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 8

Conread position: 57-265
Cow position:
Alignm length: 209
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 58-265
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 8

Conread position: 58-466
Cow position:
Alignm length: 422
Alignm identity: 288
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 166, 22

Conread position: 58-466
Cow position:
Alignm length: 425
Alignm identity: 287
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 140, 27

Conread position: 60-392
Cow position:
Alignm length: 357
Alignm identity: 252
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 0

Conread position: 60-441
Cow position:
Alignm length: 388
Alignm identity: 255
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 6, 126

Conread position: 61-359
Cow position:
Alignm length: 302
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 106

Conread position: 61-451
Cow position:
Alignm length: 403
Alignm identity: 264
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 28, 138

Conread position: 61-462
Cow position:
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 13

Conread position: 61-466
Cow position:
Alignm length: 411
Alignm identity: 266
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 207

Conread position: 64-261
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 44

Conread position: 64-468
Cow position:
Alignm length: 417
Alignm identity: 284
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 15, 72

Conread position: 66-261
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 187

Conread position: 66-455
Cow position:
Alignm length: 410
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 133

Conread position: 66-477
Cow position:
Alignm length: 429
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 280

Conread position: 69-353
Cow position:
Alignm length: 303
Alignm identity: 207
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 175, 65

Conread position: 69-450
Cow position:
Alignm length: 390
Alignm identity: 265
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 16, 109

Conread position: 69-462
Cow position:
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 19

Conread position: 70-259
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 15, 66

Conread position: 74-353
Cow position:
Alignm length: 296
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 11, 128

Conread position: 74-386
Cow position:
Alignm length: 318
Alignm identity: 213
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 167, 11

Conread position: 75-466
Cow position:
Alignm length: 410
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 259

Conread position: 82-253
Cow position:
Alignm length: 177
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 122, 113

Conread position: 83-264
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 123, 65

Conread position: 88-232
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 90-398
Cow position:
Alignm length: 326
Alignm identity: 230
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 124, 48

Conread position: 91-265
Cow position:
Alignm length: 175
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 91-414
Cow position:
Alignm length: 331
Alignm identity: 217
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 89

Conread position: 92-429
Cow position:
Alignm length: 353
Alignm identity: 238
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 118, 59

Conread position: 97-428
Cow position:
Alignm length: 346
Alignm identity: 236
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 103

Conread position: 97-442
Cow position:
Alignm length: 363
Alignm identity: 253
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 170, 96

Conread position: 97-457
Cow position:
Alignm length: 368
Alignm identity: 246
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 135, 164

Conread position: 97-467
Cow position:
Alignm length: 388
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 302

Conread position: 98-460
Cow position:
Alignm length: 374
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 170

Conread position: 99-456
Cow position:
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 38

Conread position: 104-466
Cow position:
Alignm length: 374
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 50

Conread position: 106-352
Cow position:
Alignm length: 252
Alignm identity: 168
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 164, 58

Conread position: 106-435
Cow position:
Alignm length: 345
Alignm identity: 235
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 15, 11

Conread position: 109-466
Cow position:
Alignm length: 367
Alignm identity: 246
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 110, 89

Conread position: 112-428
Cow position:
Alignm length: 331
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 185

Conread position: 113-400
Cow position:
Alignm length: 291
Alignm identity: 201
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 100, 19

Conread position: 113-428
Cow position:
Alignm length: 327
Alignm identity: 212
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 93, 71

Conread position: 122-367
Cow position:
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 142, 74

Conread position: 128-467
Cow position:
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 153-428
Cow position:
Alignm length: 292
Alignm identity: 210
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 30

Conread position: 195-456
Cow position:
Alignm length: 278
Alignm identity: 200
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 52, 137

Conread position: 250-428
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 23

Show alignments to all cow chromosomes.