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Cow genome map

           
Conread name:
           
Tes1-TES01C090030
        

               
Conread position:
               
4-460
               

               
Cow position:
               
chr22:21012553-21012088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
5-362
               

               
Cow position:
               
chr22:30999054-30998693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
24, 332
               

               
Conread position:
               
9-466
               

               
Cow position:
               
chr22:43398162-43397712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
12-421
               

               
Cow position:
               
chr22:17852479-17852885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 52
               

               
Conread position:
               
12-434
               

               
Cow position:
               
chr22:34441474-34441912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
12-466
               

               
Cow position:
               
chr22:1067755-1068222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
13-184
               

               
Cow position:
               
chr22:7584085-7584251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
13-184
               

               
Cow position:
               
chr22:16813952-16813783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
13-204
               

               
Cow position:
               
chr22:4164136-4163943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 139
               

               
Conread position:
               
13-226
               

               
Cow position:
               
chr22:2100792-2101003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
13-237
               

               
Cow position:
               
chr22:2109473-2109690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
13-244
               

               
Cow position:
               
chr22:9171564-9171331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
13-245
               

               
Cow position:
               
chr22:12157689-12157918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
13-260
               

               
Cow position:
               
chr22:1984014-1983762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 192
               

               
Conread position:
               
13-261
               

               
Cow position:
               
chr22:17652589-17652342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
13-261
               

               
Cow position:
               
chr22:45807989-45807749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
13-267
               

               
Cow position:
               
chr22:1659329-1659065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 239
               

               
Conread position:
               
13-316
               

               
Cow position:
               
chr22:30818366-30818049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
13-327
               

               
Cow position:
               
chr22:285210-285516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 54
               

               
Conread position:
               
13-344
               

               
Cow position:
               
chr22:36432814-36433156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
17, 124
               

               
Conread position:
               
13-351
               

               
Cow position:
               
chr22:12803231-12803578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
13-354
               

               
Cow position:
               
chr22:4373194-4372845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
13-359
               

               
Cow position:
               
chr22:41898292-41898650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
13-404
               

               
Cow position:
               
chr22:7882707-7882303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
13-418
               

               
Cow position:
               
chr22:44717877-44717451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
13-425
               

               
Cow position:
               
chr22:6215400-6215821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
13-428
               

               
Cow position:
               
chr22:4060791-4061209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
13-428
               

               
Cow position:
               
chr22:6709633-6710045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
13-429
               

               
Cow position:
               
chr22:40048715-40048292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
13-450
               

               
Cow position:
               
chr22:17949821-17950246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
13-456
               

               
Cow position:
               
chr22:4357243-4356802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 21
               

               
Conread position:
               
13-457
               

               
Cow position:
               
chr22:28371088-28370648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
13-457
               

               
Cow position:
               
chr22:41970997-41971451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
13-462
               

               
Cow position:
               
chr22:4044081-4043633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
13-462
               

               
Cow position:
               
chr22:10631545-10631072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
72, 403
               

               
Conread position:
               
13-462
               

               
Cow position:
               
chr22:18259373-18258925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
13-462
               

               
Cow position:
               
chr22:38438998-38439461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 218
               

               
Conread position:
               
13-462
               

               
Cow position:
               
chr22:46626220-46626671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
17, 56
               

               
Conread position:
               
13-465
               

               
Cow position:
               
chr22:33485465-33485910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
13-466
               

               
Cow position:
               
chr22:11613582-11613121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 166
               

               
Conread position:
               
13-466
               

               
Cow position:
               
chr22:13957488-13957955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
13-466
               

               
Cow position:
               
chr22:29289992-29290443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
13-466
               

               
Cow position:
               
chr22:32892856-32892393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 194
               

               
Conread position:
               
13-466
               

               
Cow position:
               
chr22:44741230-44740799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
16-209
               

               
Cow position:
               
chr22:14141187-14141382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
16-261
               

               
Cow position:
               
chr22:42635278-42635523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 212
               

               
Conread position:
               
16-265
               

               
Cow position:
               
chr22:14214215-14214457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
16-265
               

               
Cow position:
               
chr22:16094752-16094996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
16-296
               

               
Cow position:
               
chr22:17224515-17224806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
16-409
               

               
Cow position:
               
chr22:21905619-21905243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
16-420
               

               
Cow position:
               
chr22:41982565-41982977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
16-422
               

               
Cow position:
               
chr22:22613256-22612847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
16-428
               

               
Cow position:
               
chr22:15567868-15568289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
16-441
               

               
Cow position:
               
chr22:15950233-15950660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
16-460
               

               
Cow position:
               
chr22:10936692-10937134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 140
               

               
Conread position:
               
16-464
               

               
Cow position:
               
chr22:17152842-17152374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 209
               

               
Conread position:
               
16-465
               

               
Cow position:
               
chr22:4119409-4119874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
17-243
               

               
Cow position:
               
chr22:26056712-26056943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
17-260
               

               
Cow position:
               
chr22:4315787-4315538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 126
               

               
Conread position:
               
18-261
               

               
Cow position:
               
chr22:24903743-24903498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
18-265
               

               
Cow position:
               
chr22:28640003-28640245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
19-236
               

               
Cow position:
               
chr22:42618149-42617932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
19-264
               

               
Cow position:
               
chr22:1849226-1848977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
19-316
               

               
Cow position:
               
chr22:43131403-43131713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 306
               

               
Conread position:
               
19-426
               

               
Cow position:
               
chr22:15490806-15490391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
11, 151
               

               
Conread position:
               
19-438
               

               
Cow position:
               
chr22:10567566-10567967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
19-451
               

               
Cow position:
               
chr22:3301185-3301614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
11, 216
               

               
Conread position:
               
19-463
               

               
Cow position:
               
chr22:12681647-12682097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
20-266
               

               
Cow position:
               
chr22:47556003-47555755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 141
               

               
Conread position:
               
24-432
               

               
Cow position:
               
chr22:37201994-37201583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
5, 42
               

               
Conread position:
               
26-396
               

               
Cow position:
               
chr22:37066661-37067036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
27-261
               

               
Cow position:
               
chr22:19827714-19827955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 210
               

               
Conread position:
               
27-456
               

               
Cow position:
               
chr22:15039042-15039482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
27-462
               

               
Cow position:
               
chr22:18020887-18021321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
27-466
               

               
Cow position:
               
chr22:40387293-40386857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
32-201
               

               
Cow position:
               
chr22:30253337-30253168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
32-233
               

               
Cow position:
               
chr22:23440160-23440359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
32-261
               

               
Cow position:
               
chr22:1563117-1563341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
32-317
               

               
Cow position:
               
chr22:19173838-19173536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
32-399
               

               
Cow position:
               
chr22:10315216-10314835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
29, 105
               

               
Conread position:
               
32-422
               

               
Cow position:
               
chr22:28057914-28058305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
32-465
               

               
Cow position:
               
chr22:8324371-8323942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 32
               

               
Conread position:
               
35-428
               

               
Cow position:
               
chr22:9127541-9127136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
38-206
               

               
Cow position:
               
chr22:33985673-33985835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
38-412
               

               
Cow position:
               
chr22:6327637-6328019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
39-261
               

               
Cow position:
               
chr22:1871229-1871010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 203
               

               
Conread position:
               
39-396
               

               
Cow position:
               
chr22:14690843-14691214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
39-416
               

               
Cow position:
               
chr22:33447952-33448333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
39-430
               

               
Cow position:
               
chr22:28146808-28146412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 217
               

               
Conread position:
               
39-454
               

               
Cow position:
               
chr22:3842750-3842331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
39-462
               

               
Cow position:
               
chr22:21295594-21296026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
42-261
               

               
Cow position:
               
chr22:25387455-25387231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
42-428
               

               
Cow position:
               
chr22:4563489-4563092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 37
               

               
Conread position:
               
44-211
               

               
Cow position:
               
chr22:31510254-31510423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
44-255
               

               
Cow position:
               
chr22:10553559-10553770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 154
               

               
Conread position:
               
44-261
               

               
Cow position:
               
chr22:34104548-34104766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
44-262
               

               
Cow position:
               
chr22:21393188-21393411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
44-298
               

               
Cow position:
               
chr22:40789689-40789425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
172, 20
               

               
Conread position:
               
44-410
               

               
Cow position:
               
chr22:10324005-10323654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
44-411
               

               
Cow position:
               
chr22:40120755-40121132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
152, 30
               

               
Conread position:
               
44-420
               

               
Cow position:
               
chr22:24066109-24066497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
44-422
               

               
Cow position:
               
chr22:37029482-37029866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
44-450
               

               
Cow position:
               
chr22:28071684-28071263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 70
               

               
Conread position:
               
44-466
               

               
Cow position:
               
chr22:16044292-16044736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 30
               

               
Conread position:
               
46-208
               

               
Cow position:
               
chr22:23036289-23036125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
46-426
               

               
Cow position:
               
chr22:1591147-1590753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
46-461
               

               
Cow position:
               
chr22:4017595-4017173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
46-466
               

               
Cow position:
               
chr22:3250873-3251293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
48-384
               

               
Cow position:
               
chr22:43119609-43119955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
48-448
               

               
Cow position:
               
chr22:3317242-3316840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
48-462
               

               
Cow position:
               
chr22:17764496-17764072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
48-466
               

               
Cow position:
               
chr22:31646613-31646187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
49-446
               

               
Cow position:
               
chr22:644650-645048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
35, 7
               

               
Conread position:
               
49-466
               

               
Cow position:
               
chr22:10122498-10122082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
49-466
               

               
Cow position:
               
chr22:10532619-10532189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
52-466
               

               
Cow position:
               
chr22:14365843-14366261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 31
               

               
Conread position:
               
56-237
               

               
Cow position:
               
chr22:4137536-4137718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
6, 146
               

               
Conread position:
               
56-265
               

               
Cow position:
               
chr22:12527008-12527220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
56-381
               

               
Cow position:
               
chr22:5616413-5616076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
205, 24
               

               
Conread position:
               
56-422
               

               
Cow position:
               
chr22:8138152-8138522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
56-466
               

               
Cow position:
               
chr22:10295150-10294745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 64
               

               
Conread position:
               
57-428
               

               
Cow position:
               
chr22:846019-845633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 281
               

               
Conread position:
               
58-429
               

               
Cow position:
               
chr22:26339863-26339488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
209, 23
               

               
Conread position:
               
58-434
               

               
Cow position:
               
chr22:21355026-21355418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 149
               

               
Conread position:
               
58-462
               

               
Cow position:
               
chr22:5337486-5337901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 105
               

               
Conread position:
               
58-466
               

               
Cow position:
               
chr22:590451-590041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
59-261
               

               
Cow position:
               
chr22:12341307-12341104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
60-410
               

               
Cow position:
               
chr22:3965296-3964933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 152
               

               
Conread position:
               
60-420
               

               
Cow position:
               
chr22:10421143-10420758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 189
               

               
Conread position:
               
60-425
               

               
Cow position:
               
chr22:26141384-26141007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
60-426
               

               
Cow position:
               
chr22:25742839-25743221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 180
               

               
Conread position:
               
60-435
               

               
Cow position:
               
chr22:2623412-2623792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
60-450
               

               
Cow position:
               
chr22:14924622-14925013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
24, 142
               

               
Conread position:
               
60-457
               

               
Cow position:
               
chr22:21502854-21502438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 180
               

               
Conread position:
               
60-477
               

               
Cow position:
               
chr22:40072087-40071651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 110
               

               
Conread position:
               
61-364
               

               
Cow position:
               
chr22:3367296-3366991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
10, 136
               

               
Conread position:
               
61-414
               

               
Cow position:
               
chr22:17294827-17295184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
61-466
               

               
Cow position:
               
chr22:10684982-10685386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
61-466
               

               
Cow position:
               
chr22:18838364-18837950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
61-466
               

               
Cow position:
               
chr22:30049457-30049879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
23, 389
               

               
Conread position:
               
65-462
               

               
Cow position:
               
chr22:30699283-30698878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 16
               

               
Conread position:
               
66-424
               

               
Cow position:
               
chr22:15090846-15090474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 156
               

               
Conread position:
               
66-463
               

               
Cow position:
               
chr22:4645875-4645473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 34
               

               
Conread position:
               
66-466
               

               
Cow position:
               
chr22:9977913-9977510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
67-466
               

               
Cow position:
               
chr22:8481747-8481341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 197
               

               
Conread position:
               
69-465
               

               
Cow position:
               
chr22:46567793-46568195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
198, 19
               

               
Conread position:
               
70-232
               

               
Cow position:
               
chr22:21235332-21235496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
72-296
               

               
Cow position:
               
chr22:34735962-34735726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 122
               

               
Conread position:
               
74-327
               

               
Cow position:
               
chr22:9283502-9283771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 226
               

               
Conread position:
               
77-261
               

               
Cow position:
               
chr22:4011277-4011093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
8, 136
               

               
Conread position:
               
77-266
               

               
Cow position:
               
chr22:27619826-27619633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
121, 143
               

               
Conread position:
               
77-466
               

               
Cow position:
               
chr22:864422-864827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
83-245
               

               
Cow position:
               
chr22:12686600-12686752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
86-466
               

               
Cow position:
               
chr22:11813640-11814022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
114, 199
               

               
Conread position:
               
92-261
               

               
Cow position:
               
chr22:41979769-41979934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
92-418
               

               
Cow position:
               
chr22:31592779-31593121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
117, 51
               

               
Conread position:
               
92-457
               

               
Cow position:
               
chr22:40720218-40720585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 84
               

               
Conread position:
               
92-466
               

               
Cow position:
               
chr22:22160803-22160414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 318
               

               
Conread position:
               
95-261
               

               
Cow position:
               
chr22:34632209-34632046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
97-261
               

               
Cow position:
               
chr22:38320614-38320769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
97-262
               

               
Cow position:
               
chr22:10669401-10669566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
89, 143
               

               
Conread position:
               
97-400
               

               
Cow position:
               
chr22:22223259-22222950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
189, 101
               

               
Conread position:
               
97-445
               

               
Cow position:
               
chr22:14638405-14638753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 170
               

               
Conread position:
               
97-460
               

               
Cow position:
               
chr22:23857118-23856747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 79
               

               
Conread position:
               
97-466
               

               
Cow position:
               
chr22:27171189-27171562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 151
               

               
Conread position:
               
97-506
               

               
Cow position:
               
chr22:44180665-44180249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
109, 103
               

               
Conread position:
               
98-428
               

               
Cow position:
               
chr22:19775361-19775695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
109, 137
               

               
Conread position:
               
99-462
               

               
Cow position:
               
chr22:13300481-13300117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
96, 112
               

               
Conread position:
               
100-457
               

               
Cow position:
               
chr22:912167-911804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
92, 129
               

               
Conread position:
               
101-466
               

               
Cow position:
               
chr22:24611025-24611383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
102-455
               

               
Cow position:
               
chr22:3993677-3993314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 92
               

               
Conread position:
               
102-462
               

               
Cow position:
               
chr22:17992964-17993333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 126
               

               
Conread position:
               
103-428
               

               
Cow position:
               
chr22:27224193-27223862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 81
               

               
Conread position:
               
103-428
               

               
Cow position:
               
chr22:35753243-35753576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
103-466
               

               
Cow position:
               
chr22:14882050-14882418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
108-460
               

               
Cow position:
               
chr22:26097559-26097915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 21
               

               
Conread position:
               
108-470
               

               
Cow position:
               
chr22:41829180-41829553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
150, 15
               

               
Conread position:
               
122-466
               

               
Cow position:
               
chr22:226407-226743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
82, 116
               

               
Conread position:
               
135-398
               

               
Cow position:
               
chr22:43812387-43812658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
135-464
               

               
Cow position:
               
chr22:1987028-1986703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
136-466
               

               
Cow position:
               
chr22:41270968-41271297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 61
               

               
Conread position:
               
142-405
               

               
Cow position:
               
chr22:47582926-47582659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
116, 36
               

               
Conread position:
               
159-466
               

               
Cow position:
               
chr22:36569541-36569849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
161-460
               

               
Cow position:
               
chr22:14816423-14816725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
98, 56
               

               
Conread position:
               
166-467
               

               
Cow position:
               
chr22:9734858-9734551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
198-428
               

               
Cow position:
               
chr22:45355352-45355116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
198-429
               

               
Cow position:
               
chr22:19848423-19848666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
59, 116
               

               
Conread position:
               
208-465
               

               
Cow position:
               
chr22:13016833-13017087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 168
               

               
Conread position:
               
216-428
               

               
Cow position:
               
chr22:18326647-18326853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 57
               
Show alignments to all cow chromosomes.