Cow genome map
| Conread name: | Tes1-TES01C090030 |
| Conread position: | 1-466 |
| Cow position: | chr26:5102635-5103109 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 9 |
| Conread position: | 12-261 |
| Cow position: | chr26:24240863-24240605 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 5, 94 |
| Conread position: | 12-363 |
| Cow position: | chr26:33736377-33736724 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 5, 78 |
| Conread position: | 13-202 |
| Cow position: | chr26:11875045-11875233 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 13-240 |
| Cow position: | chr26:28423462-28423236 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 13-259 |
| Cow position: | chr26:19591655-19591412 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 83, 17 |
| Conread position: | 13-261 |
| Cow position: | chr26:7687066-7687311 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 20, 56 |
| Conread position: | 13-321 |
| Cow position: | chr26:28251330-28251000 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 72, 41 |
| Conread position: | 13-330 |
| Cow position: | chr26:22892271-22892600 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 16, 43 |
| Conread position: | 13-430 |
| Cow position: | chr26:647546-647954 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 287 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 17, 146 |
| Conread position: | 13-462 |
| Cow position: | chr26:20291516-20291965 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 13-466 |
| Cow position: | chr26:8307350-8307795 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 194 |
| Conread position: | 13-466 |
| Cow position: | chr26:9492095-9491644 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 16 |
| Conread position: | 13-466 |
| Cow position: | chr26:26887961-26888420 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 13-466 |
| Cow position: | chr26:27491319-27491789 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 127 |
| Conread position: | 13-466 |
| Cow position: | chr26:33201894-33202345 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 16-232 |
| Cow position: | chr26:5836644-5836862 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 14, 187 |
| Conread position: | 16-256 |
| Cow position: | chr26:34724701-34724947 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 16-317 |
| Cow position: | chr26:19446311-19445984 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 14, 115 |
| Conread position: | 16-320 |
| Cow position: | chr26:20770024-20769709 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 14, 50 |
| Conread position: | 16-466 |
| Cow position: | chr26:33112212-33112667 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 310 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 18-209 |
| Cow position: | chr26:1328690-1328876 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 18-466 |
| Cow position: | chr26:18825112-18825560 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 311 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 11, 25 |
| Conread position: | 19-373 |
| Cow position: | chr26:32815618-32815970 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 11, 97 |
| Conread position: | 19-425 |
| Cow position: | chr26:23141932-23142341 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 248 |
| Conread position: | 19-426 |
| Cow position: | chr26:4854714-4854289 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 11, 59 |
| Conread position: | 19-466 |
| Cow position: | chr26:19459862-19459388 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 325 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 27-426 |
| Cow position: | chr26:8811292-8810884 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 32-264 |
| Cow position: | chr26:677824-678053 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 53, 32 |
| Conread position: | 32-466 |
| Cow position: | chr26:13020989-13021437 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 32 |
| Conread position: | 36-252 |
| Cow position: | chr26:22033633-22033420 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 167, 38 |
| Conread position: | 44-194 |
| Cow position: | chr26:33242033-33241884 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 44-222 |
| Cow position: | chr26:7314767-7314586 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 44-245 |
| Cow position: | chr26:26537377-26537581 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 44-261 |
| Cow position: | chr26:19110328-19110113 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 44-328 |
| Cow position: | chr26:12964553-12964850 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 44-356 |
| Cow position: | chr26:23315918-23315588 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 44-363 |
| Cow position: | chr26:14175427-14175096 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 45, 12 |
| Conread position: | 44-402 |
| Cow position: | chr26:31605550-31605184 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 44-466 |
| Cow position: | chr26:8699900-8700337 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 45-203 |
| Cow position: | chr26:34611037-34611195 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 46-330 |
| Cow position: | chr26:23582802-23583102 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 48-418 |
| Cow position: | chr26:35704524-35704145 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 17 |
| Conread position: | 56-442 |
| Cow position: | chr26:33566909-33567306 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 262 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 5, 112 |
| Conread position: | 58-460 |
| Cow position: | chr26:32955495-32955905 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 160 |
| Conread position: | 60-236 |
| Cow position: | chr26:12940530-12940359 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 139 |
| Conread position: | 60-245 |
| Cow position: | chr26:33392524-33392337 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 60-261 |
| Cow position: | chr26:22152357-22152157 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 141 |
| Conread position: | 60-321 |
| Cow position: | chr26:26950326-26950591 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 60-336 |
| Cow position: | chr26:7212454-7212729 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 179 |
| Conread position: | 60-472 |
| Cow position: | chr26:12144988-12145396 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 282 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 25, 271 |
| Conread position: | 66-260 |
| Cow position: | chr26:23924974-23924777 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 69-258 |
| Cow position: | chr26:14481433-14481621 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 117 |
| Conread position: | 69-270 |
| Cow position: | chr26:6451300-6451097 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 70-410 |
| Cow position: | chr26:21243216-21242872 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 9, 65 |
| Conread position: | 72-418 |
| Cow position: | chr26:32652616-32652963 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 117 |
| Conread position: | 74-394 |
| Cow position: | chr26:21636921-21637253 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 252 |
| Conread position: | 96-265 |
| Cow position: | chr26:18651543-18651709 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 60, 38 |
| Conread position: | 97-466 |
| Cow position: | chr26:32601442-32601064 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 142, 79 |
| Conread position: | 99-429 |
| Cow position: | chr26:32897779-32898122 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 236 |
| Conread position: | 103-405 |
| Cow position: | chr26:21992188-21991885 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 178, 94 |
| Conread position: | 106-466 |
| Cow position: | chr26:29576447-29576103 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 170, 97 |
| Conread position: | 134-461 |
| Cow position: | chr26:32013688-32013348 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 137 |
| Conread position: | 135-408 |
| Cow position: | chr26:5307197-5306902 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 162-417 |
| Cow position: | chr26:28760064-28760325 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 54, 156 |
| Conread position: | 163-419 |
| Cow position: | chr26:24280850-24280588 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 46, 155 |
| Conread position: | 189-386 |
| Cow position: | chr26:30128021-30128227 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 70, 135 |
| Conread position: | 211-452 |
| Cow position: | chr26:1329523-1329271 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 55, 129 |
| Conread position: | 215-461 |
| Cow position: | chr26:7961607-7961350 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 52 |
Show alignments to all cow chromosomes.