Cow genome map


           Conread name:
           Tes1-TES01C090030
        

               Conread position:
               1-466
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               301
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               12-261
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               5, 94
               

               Conread position:
               12-363
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               5, 78
               

               Conread position:
               13-202
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               17, 53
               

               Conread position:
               13-240
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 53
               

               Conread position:
               13-259
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               83, 17
               

               Conread position:
               13-261
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               20, 56
               

               Conread position:
               13-321
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               72, 41
               

               Conread position:
               13-330
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               237
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               16, 43
               

               Conread position:
               13-430
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               287
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               17, 146
               

               Conread position:
               13-462
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 53
               

               Conread position:
               13-466
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 194
               

               Conread position:
               13-466
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 16
               

               Conread position:
               13-466
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 29
               

               Conread position:
               13-466
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 127
               

               Conread position:
               13-466
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 53
               

               Conread position:
               16-232
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               14, 187
               

               Conread position:
               16-256
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               16-317
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               14, 115
               

               Conread position:
               16-320
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               225
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               14, 50
               

               Conread position:
               16-466
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               310
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               14, 49
               

               Conread position:
               18-209
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               13, 57
               

               Conread position:
               18-466
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               311
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               19-373
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               11, 97
               

               Conread position:
               19-425
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 248
               

               Conread position:
               19-426
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               11, 59
               

               Conread position:
               19-466
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               325
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               10, 62
               

               Conread position:
               27-426
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               17, 30
               

               Conread position:
               32-264
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               53, 32
               

               Conread position:
               32-466
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 32
               

               Conread position:
               36-252
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               167, 38
               

               Conread position:
               44-194
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               41, 20
               

               Conread position:
               44-222
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 22
               

               Conread position:
               44-245
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               52, 19
               

               Conread position:
               44-261
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               45, 25
               

               Conread position:
               44-328
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               41, 20
               

               Conread position:
               44-356
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               41, 28
               

               Conread position:
               44-363
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               44-402
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               257
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               41, 21
               

               Conread position:
               44-466
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 12
               

               Conread position:
               45-203
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               40, 21
               

               Conread position:
               46-330
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               48-418
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 17
               

               Conread position:
               56-442
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               262
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               5, 112
               

               Conread position:
               58-460
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               284
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               8, 160
               

               Conread position:
               60-236
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 139
               

               Conread position:
               60-245
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               60-261
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               24, 141
               

               Conread position:
               60-321
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               153, 74
               

               Conread position:
               60-336
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               25, 179
               

               Conread position:
               60-472
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               282
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               25, 271
               

               Conread position:
               66-260
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               69-258
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 117
               

               Conread position:
               69-270
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 47
               

               Conread position:
               70-410
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               9, 65
               

               Conread position:
               72-418
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 117
               

               Conread position:
               74-394
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 252
               

               Conread position:
               96-265
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               60, 38
               

               Conread position:
               97-466
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               258
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               142, 79
               

               Conread position:
               99-429
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 236
               

               Conread position:
               103-405
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               178, 94
               

               Conread position:
               106-466
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               170, 97
               

               Conread position:
               134-461
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               65, 137
               

               Conread position:
               135-408
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               162-417
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               54, 156
               

               Conread position:
               163-419
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               46, 155
               

               Conread position:
               189-386
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               70, 135
               

               Conread position:
               211-452
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               55, 129
               

               Conread position:
               215-461
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               71, 52
               
Show alignments to all cow chromosomes.