Cow genome map

Conread name: Tes1-TES01C090030

Conread position: 9-384
Cow position: chr3:8061264-8060886 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 251
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 48, 20

Conread position: 12-257
Cow position: chr3:17331857-17331619 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 55

Conread position: 12-261
Cow position: chr3:79196900-79196648 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 221

Conread position: 12-457
Cow position: chr3:80565101-80564640 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 45

Conread position: 12-466
Cow position: chr3:11987465-11987004 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 321
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 53

Conread position: 12-466
Cow position: chr3:16752116-16752574 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 130

Conread position: 13-196
Cow position: chr3:23132032-23132217 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 13-232
Cow position: chr3:10668743-10668962 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 53

Conread position: 13-237
Cow position: chr3:31349972-31350193 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 54

Conread position: 13-237
Cow position: chr3:71474271-71474496 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 34

Conread position: 13-240
Cow position: chr3:32409356-32409120 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 13-242
Cow position: chr3:59299709-59299483 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 43

Conread position: 13-255
Cow position: chr3:22165279-22165523 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 126

Conread position: 13-256
Cow position: chr3:31361559-31361312 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 28

Conread position: 13-256
Cow position: chr3:60264585-60264824 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 17, 27

Conread position: 13-261
Cow position: chr3:3883684-3883930 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 17, 50

Conread position: 13-261
Cow position: chr3:15950782-15951023 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 36

Conread position: 13-261
Cow position: chr3:70761987-70762234 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 41

Conread position: 13-264
Cow position: chr3:54373721-54373973 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 61

Conread position: 13-292
Cow position: chr3:19682842-19682550 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 84

Conread position: 13-298
Cow position: chr3:48072747-48073038 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 17, 51

Conread position: 13-318
Cow position: chr3:54506842-54506525 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 17, 53

Conread position: 13-360
Cow position: chr3:11063503-11063156 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 75

Conread position: 13-387
Cow position: chr3:44932648-44932259 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 51

Conread position: 13-387
Cow position: chr3:63316263-63315882 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 246
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 17, 69

Conread position: 13-387
Cow position: chr3:78092375-78092755 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 262
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 18, 25

Conread position: 13-399
Cow position: chr3:52608317-52607922 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 30

Conread position: 13-411
Cow position: chr3:7330997-7331392 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 276
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 17, 23

Conread position: 13-416
Cow position: chr3:32585281-32584880 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 16

Conread position: 13-416
Cow position: chr3:74234321-74233922 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 53

Conread position: 13-425
Cow position: chr3:23408227-23408629 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 285
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 16, 41

Conread position: 13-426
Cow position: chr3:27274663-27274252 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 294
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 17, 53

Conread position: 13-426
Cow position: chr3:39969727-39970160 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 53

Conread position: 13-439
Cow position: chr3:59610583-59611017 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 26

Conread position: 13-441
Cow position: chr3:53222148-53221716 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 53

Conread position: 13-454
Cow position: chr3:50768815-50768364 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 52

Conread position: 13-457
Cow position: chr3:59604978-59604553 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 44

Conread position: 13-466
Cow position: chr3:10958105-10958552 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 13-466
Cow position: chr3:45700938-45700507 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 299
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 66, 17

Conread position: 13-466
Cow position: chr3:53150469-53149999 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 34

Conread position: 13-466
Cow position: chr3:55189614-55190074 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 392

Conread position: 13-466
Cow position: chr3:56582984-56582519 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 316
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 17, 69

Conread position: 13-466
Cow position: chr3:61224613-61225061 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 304
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 17, 30

Conread position: 16-175
Cow position: chr3:73421359-73421520 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 73

Conread position: 16-207
Cow position: chr3:49344828-49344634 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 16-237
Cow position: chr3:69785487-69785714 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 14, 51

Conread position: 16-252
Cow position: chr3:19626374-19626612 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 89

Conread position: 16-307
Cow position: chr3:75107905-75107621 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 14, 31

Conread position: 16-353
Cow position: chr3:70609758-70609407 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 5

Conread position: 16-362
Cow position: chr3:53083850-53084176 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 233
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 205

Conread position: 16-449
Cow position: chr3:7337651-7338092 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 50

Conread position: 16-462
Cow position: chr3:15051819-15052265 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 288
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 67

Conread position: 16-465
Cow position: chr3:70565601-70566064 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 199

Conread position: 16-466
Cow position: chr3:53428785-53429215 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 49

Conread position: 16-466
Cow position: chr3:78077323-78076865 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 49

Conread position: 17-244
Cow position: chr3:49363239-49363020 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 40

Conread position: 17-327
Cow position: chr3:74079506-74079832 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 13, 67

Conread position: 17-466
Cow position: chr3:210454-209995 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 236

Conread position: 18-232
Cow position: chr3:64196956-64196741 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 12, 41

Conread position: 18-266
Cow position: chr3:19585995-19585745 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 119

Conread position: 18-380
Cow position: chr3:12705416-12705801 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 265
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 12, 41

Conread position: 18-438
Cow position: chr3:30463044-30463466 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 294
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 11, 61

Conread position: 19-372
Cow position: chr3:68156858-68156496 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 263
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 11, 174

Conread position: 19-421
Cow position: chr3:26681685-26682076 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 47

Conread position: 19-428
Cow position: chr3:54049899-54050309 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 42

Conread position: 19-429
Cow position: chr3:65413144-65413566 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 283
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 12, 55

Conread position: 19-462
Cow position: chr3:68303448-68303005 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 84

Conread position: 19-466
Cow position: chr3:2675162-2674702 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 196

Conread position: 19-466
Cow position: chr3:71231528-71231079 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 302
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 83

Conread position: 21-257
Cow position: chr3:9117157-9116920 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 9, 126

Conread position: 27-265
Cow position: chr3:58134563-58134803 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 154
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 27-400
Cow position: chr3:75080878-75080504 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 28

Conread position: 27-466
Cow position: chr3:2630884-2630474 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 304
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 234, 38

Conread position: 28-255
Cow position: chr3:3316696-3316918 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 29, 10

Conread position: 29-466
Cow position: chr3:49328062-49327619 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 30-402
Cow position: chr3:73461083-73460715 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 34

Conread position: 32-259
Cow position: chr3:74243109-74242886 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 52, 42

Conread position: 32-425
Cow position: chr3:73442979-73443374 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 76

Conread position: 38-210
Cow position: chr3:68004590-68004764 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 38-237
Cow position: chr3:68616221-68616414 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 47, 27

Conread position: 38-259
Cow position: chr3:55177637-55177860 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 47, 27

Conread position: 38-395
Cow position: chr3:55835711-55836086 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 258
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 29

Conread position: 38-411
Cow position: chr3:54946240-54945852 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 27

Conread position: 38-466
Cow position: chr3:48363183-48362756 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 105

Conread position: 39-199
Cow position: chr3:44960895-44961055 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 131

Conread position: 39-236
Cow position: chr3:15173191-15172991 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 39-371
Cow position: chr3:15506561-15506216 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 23, 94

Conread position: 39-429
Cow position: chr3:3738591-3738200 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 280
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 46, 96

Conread position: 40-466
Cow position: chr3:55271938-55272367 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 24

Conread position: 41-231
Cow position: chr3:3478147-3478338 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 40, 96

Conread position: 42-258
Cow position: chr3:55984205-55983986 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 147
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 42, 81

Conread position: 42-265
Cow position: chr3:1785137-1785357 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 164

Conread position: 42-266
Cow position: chr3:53508716-53508505 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 22

Conread position: 44-203
Cow position: chr3:82629420-82629261 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 30

Conread position: 44-265
Cow position: chr3:26874696-26874477 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 22, 111

Conread position: 44-359
Cow position: chr3:60265151-60265457 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 217
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 21

Conread position: 44-371
Cow position: chr3:67930082-67930411 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 223
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 67

Conread position: 44-373
Cow position: chr3:17447512-17447843 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 239
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 40, 21

Conread position: 44-395
Cow position: chr3:13507575-13507207 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 273

Conread position: 44-405
Cow position: chr3:22716193-22716548 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 44-408
Cow position: chr3:70899993-70899630 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 256
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 54, 21

Conread position: 44-426
Cow position: chr3:50069862-50069492 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 260
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 171, 23

Conread position: 44-457
Cow position: chr3:67704649-67704218 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 25

Conread position: 44-466
Cow position: chr3:12711810-12712250 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 418

Conread position: 44-466
Cow position: chr3:80581758-80581348 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 25

Conread position: 44-477
Cow position: chr3:80072234-80071779 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 22

Conread position: 45-386
Cow position: chr3:18687010-18686668 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 223
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 154

Conread position: 45-457
Cow position: chr3:14552977-14552560 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 19

Conread position: 46-259
Cow position: chr3:62789072-62789289 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 43, 94

Conread position: 46-265
Cow position: chr3:78093286-78093499 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 39, 142

Conread position: 46-386
Cow position: chr3:15752533-15752876 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 95

Conread position: 46-466
Cow position: chr3:17934834-17935254 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 275
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 11, 190

Conread position: 49-245
Cow position: chr3:18607770-18607566 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 132

Conread position: 49-434
Cow position: chr3:56059909-56059510 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 15

Conread position: 49-465
Cow position: chr3:13353462-13353034 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 87

Conread position: 52-356
Cow position: chr3:6182132-6182422 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 13

Conread position: 52-386
Cow position: chr3:25755119-25754788 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 235
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 73

Conread position: 52-418
Cow position: chr3:38864222-38863833 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 276
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 33, 14

Conread position: 52-420
Cow position: chr3:59208889-59208532 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 259
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 208, 13

Conread position: 53-245
Cow position: chr3:3472136-3471942 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 124

Conread position: 53-438
Cow position: chr3:82019745-82020149 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 277
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 16

Conread position: 54-462
Cow position: chr3:18459434-18459843 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 10

Conread position: 54-466
Cow position: chr3:4461389-4461815 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 109

Conread position: 54-466
Cow position: chr3:71497045-71497473 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 23

Conread position: 57-466
Cow position: chr3:54781912-54782338 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 299
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 24

Conread position: 58-477
Cow position: chr3:83815697-83816139 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 53

Conread position: 59-462
Cow position: chr3:37186916-37186518 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 271
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 29

Conread position: 59-466
Cow position: chr3:74601204-74600792 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 210

Conread position: 60-196
Cow position: chr3:51349912-51349775 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 60-438
Cow position: chr3:62826530-62826923 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 64

Conread position: 60-466
Cow position: chr3:63177571-63177185 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 11

Conread position: 61-244
Cow position: chr3:47753314-47753129 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 61-265
Cow position: chr3:73237284-73237079 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 28, 195

Conread position: 61-273
Cow position: chr3:76922575-76922787 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 114

Conread position: 61-466
Cow position: chr3:28908115-28908530 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 274
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 28, 145

Conread position: 64-319
Cow position: chr3:20677757-20678020 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 71

Conread position: 64-435
Cow position: chr3:80740647-80740281 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 257
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 21, 69

Conread position: 66-418
Cow position: chr3:26066084-26065721 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 91

Conread position: 66-428
Cow position: chr3:45647763-45647387 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 360

Conread position: 66-457
Cow position: chr3:59799331-59798936 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 139

Conread position: 68-209
Cow position: chr3:71703556-71703417 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 67

Conread position: 69-237
Cow position: chr3:75608578-75608409 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 75

Conread position: 69-417
Cow position: chr3:525426-525075 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 20, 120

Conread position: 69-419
Cow position: chr3:77365210-77365575 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 239
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 205

Conread position: 69-429
Cow position: chr3:9641648-9641273 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 149

Conread position: 69-429
Cow position: chr3:19006737-19006376 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 15, 63

Conread position: 69-434
Cow position: chr3:74533429-74533051 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 132

Conread position: 69-462
Cow position: chr3:5100692-5101083 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 129

Conread position: 70-377
Cow position: chr3:22232575-22232882 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 204
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 15, 83

Conread position: 70-462
Cow position: chr3:69750635-69751024 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 11

Conread position: 72-396
Cow position: chr3:23448061-23448389 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 210
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 131, 153

Conread position: 72-466
Cow position: chr3:26218974-26219388 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 129

Conread position: 74-354
Cow position: chr3:74754400-74754113 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 105

Conread position: 74-366
Cow position: chr3:76015367-76015071 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 192
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 152

Conread position: 74-466
Cow position: chr3:58968828-58969220 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 271
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 10, 124

Conread position: 77-407
Cow position: chr3:60933488-60933146 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 141, 154

Conread position: 77-466
Cow position: chr3:70896120-70895719 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 133

Conread position: 88-237
Cow position: chr3:478740-478888 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 123, 46

Conread position: 88-451
Cow position: chr3:53790477-53790856 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 51

Conread position: 88-466
Cow position: chr3:75711366-75710986 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 277
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 157, 104

Conread position: 91-462
Cow position: chr3:26553658-26554037 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 257
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 177, 107

Conread position: 92-261
Cow position: chr3:70334640-70334806 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 92-426
Cow position: chr3:64280874-64281224 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 59, 120

Conread position: 92-428
Cow position: chr3:5097263-5096913 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 186, 108

Conread position: 97-237
Cow position: chr3:70614436-70614574 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 115, 37

Conread position: 97-261
Cow position: chr3:12670564-12670725 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 19

Conread position: 97-428
Cow position: chr3:20437605-20437937 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 231
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 158, 109

Conread position: 97-456
Cow position: chr3:24548786-24549149 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 193

Conread position: 97-457
Cow position: chr3:51012502-51012851 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 98, 0

Conread position: 97-462
Cow position: chr3:80818768-80818413 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 243
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 106, 128

Conread position: 97-466
Cow position: chr3:15954034-15954404 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 170

Conread position: 99-395
Cow position: chr3:14632934-14633244 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 99, 247

Conread position: 102-261
Cow position: chr3:55109567-55109728 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 103-237
Cow position: chr3:19162656-19162524 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 23

Conread position: 103-429
Cow position: chr3:15057575-15057889 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 237
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 158, 22

Conread position: 104-418
Cow position: chr3:10347395-10347074 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 240
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 159, 30

Conread position: 106-462
Cow position: chr3:73961655-73962002 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 72, 62

Conread position: 106-466
Cow position: chr3:79902538-79902176 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 252
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 92, 121

Conread position: 122-275
Cow position: chr3:75907404-75907253 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 134, 15

Conread position: 122-360
Cow position: chr3:22907702-22907939 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 82

Conread position: 122-448
Cow position: chr3:23416863-23417174 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 296, 15

Conread position: 134-429
Cow position: chr3:48629575-48629877 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 49

Conread position: 134-466
Cow position: chr3:49793411-49793086 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 7, 191

Conread position: 155-418
Cow position: chr3:74409478-74409215 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 161

Conread position: 160-421
Cow position: chr3:30701298-30701039 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 105

Conread position: 189-429
Cow position: chr3:70467865-70468094 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 78, 0

Conread position: 195-466
Cow position: chr3:8159909-8159628 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 81, 186

Conread position: 207-465
Cow position: chr3:15080802-15081065 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 7, 103

Conread position: 215-462
Cow position: chr3:15661765-15662021 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 79, 238

Conread position: 241-466
Cow position: chr3:61701394-61701617 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 148
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 250-429
Cow position: chr3:202547-202725 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 133, 0

Show alignments to all cow chromosomes.