Cow genome map

Conread name: Tes1-TES01C090030

Conread position: 3-363
Cow position: chr5:44028106-44028478 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 11, 137

Conread position: 4-343
Cow position: chr5:42050744-42050391 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 13, 50

Conread position: 12-414
Cow position: chr5:72895875-72895465 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 259
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 5, 230

Conread position: 12-429
Cow position: chr5:35685127-35684692 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 128

Conread position: 13-169
Cow position: chr5:34288067-34288221 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 57

Conread position: 13-186
Cow position: chr5:38169080-38168906 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 52

Conread position: 13-187
Cow position: chr5:46704113-46704288 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 51

Conread position: 13-231
Cow position: chr5:22795394-22795181 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 22

Conread position: 13-232
Cow position: chr5:66466501-66466285 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 99

Conread position: 13-239
Cow position: chr5:49501631-49501864 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 196

Conread position: 13-259
Cow position: chr5:30233097-30232843 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 23

Conread position: 13-261
Cow position: chr5:17554848-17555094 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 53

Conread position: 13-261
Cow position: chr5:60016351-60016105 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 52

Conread position: 13-265
Cow position: chr5:43403096-43402834 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 17, 0

Conread position: 13-266
Cow position: chr5:20288071-20288330 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 17, 194

Conread position: 13-324
Cow position: chr5:64026828-64027149 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 230
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 188

Conread position: 13-327
Cow position: chr5:70951707-70952020 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 229
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 18, 43

Conread position: 13-330
Cow position: chr5:61007254-61006937 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 211
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 62

Conread position: 13-342
Cow position: chr5:12673293-12673620 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 16, 57

Conread position: 13-344
Cow position: chr5:3582742-3582415 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 44

Conread position: 13-347
Cow position: chr5:45397754-45397418 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 17, 52

Conread position: 13-353
Cow position: chr5:30628966-30629324 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 17, 206

Conread position: 13-357
Cow position: chr5:56014909-56014564 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 72, 21

Conread position: 13-421
Cow position: chr5:24996034-24996458 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 16

Conread position: 13-422
Cow position: chr5:30253927-30253510 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 25

Conread position: 13-426
Cow position: chr5:11667997-11668417 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 277
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 17, 80

Conread position: 13-426
Cow position: chr5:57074145-57074574 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 13-429
Cow position: chr5:69338001-69337590 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 13

Conread position: 13-435
Cow position: chr5:21829054-21828615 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 99

Conread position: 13-466
Cow position: chr5:21617642-21617177 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 51

Conread position: 13-466
Cow position: chr5:30276873-30276417 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 40

Conread position: 13-466
Cow position: chr5:45845503-45845971 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 53

Conread position: 13-466
Cow position: chr5:47601995-47601533 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 16

Conread position: 13-466
Cow position: chr5:65753047-65752581 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 63

Conread position: 13-466
Cow position: chr5:65941064-65941531 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 53

Conread position: 14-261
Cow position: chr5:60183986-60183739 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 70, 16

Conread position: 16-183
Cow position: chr5:26147774-26147606 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 51

Conread position: 16-187
Cow position: chr5:55942193-55942368 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 16-237
Cow position: chr5:66531099-66530879 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 13, 26

Conread position: 16-240
Cow position: chr5:69099903-69099677 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 16, 51

Conread position: 16-261
Cow position: chr5:59626788-59627036 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 16-316
Cow position: chr5:22667254-22666960 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 13, 49

Conread position: 16-350
Cow position: chr5:46512582-46512930 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 13, 106

Conread position: 16-416
Cow position: chr5:56071042-56070624 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 51

Conread position: 16-457
Cow position: chr5:9893940-9894396 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 51

Conread position: 16-462
Cow position: chr5:66257818-66257371 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 39

Conread position: 16-465
Cow position: chr5:61726141-61725693 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 15

Conread position: 16-466
Cow position: chr5:26467812-26467344 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 389

Conread position: 16-471
Cow position: chr5:35826781-35826310 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 43

Conread position: 17-464
Cow position: chr5:66366692-66366258 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 115

Conread position: 19-241
Cow position: chr5:17602024-17602243 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 11, 131

Conread position: 19-357
Cow position: chr5:55956091-55955735 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 10, 182

Conread position: 19-454
Cow position: chr5:64139739-64139297 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 15

Conread position: 19-462
Cow position: chr5:12322630-12323068 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 310
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 11, 26

Conread position: 19-466
Cow position: chr5:42845412-42845878 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 56

Conread position: 19-466
Cow position: chr5:53055378-53055831 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 307
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 10, 307

Conread position: 21-395
Cow position: chr5:4280623-4280255 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 259
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 8, 26

Conread position: 27-260
Cow position: chr5:17086848-17087083 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 99

Conread position: 27-421
Cow position: chr5:68719040-68718649 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 276
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 15, 39

Conread position: 27-465
Cow position: chr5:50600218-50599789 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 37

Conread position: 30-204
Cow position: chr5:50824760-50824586 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 34

Conread position: 32-237
Cow position: chr5:61102881-61102676 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 52, 32

Conread position: 32-461
Cow position: chr5:50533221-50533658 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 34

Conread position: 32-466
Cow position: chr5:67212524-67212103 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 8

Conread position: 38-232
Cow position: chr5:57686576-57686774 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 38-261
Cow position: chr5:62378939-62378729 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 27

Conread position: 38-417
Cow position: chr5:22242607-22243015 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 9

Conread position: 38-420
Cow position: chr5:41165247-41164855 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 20

Conread position: 38-427
Cow position: chr5:37646383-37646792 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 27

Conread position: 38-462
Cow position: chr5:12351648-12352056 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 36

Conread position: 39-241
Cow position: chr5:49341889-49342091 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 191

Conread position: 39-260
Cow position: chr5:64591935-64592155 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 209

Conread position: 39-266
Cow position: chr5:73418129-73418350 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 28, 119

Conread position: 43-260
Cow position: chr5:49440720-49440933 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 165, 30

Conread position: 43-466
Cow position: chr5:44053900-44054313 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 44-211
Cow position: chr5:9233833-9234002 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 44-245
Cow position: chr5:56338866-56339066 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 40, 154

Conread position: 44-265
Cow position: chr5:19524055-19523834 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 155

Conread position: 44-386
Cow position: chr5:23168671-23169018 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 285

Conread position: 44-400
Cow position: chr5:35969685-35969329 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 25

Conread position: 44-411
Cow position: chr5:25495205-25495562 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 258
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 48, 21

Conread position: 44-426
Cow position: chr5:30845263-30844873 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 270
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 43, 28

Conread position: 44-428
Cow position: chr5:32338811-32339216 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 274
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 41, 30

Conread position: 44-462
Cow position: chr5:29828205-29827779 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 158

Conread position: 44-466
Cow position: chr5:5110912-5111355 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 159

Conread position: 45-425
Cow position: chr5:16893620-16894014 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 19

Conread position: 45-429
Cow position: chr5:40109644-40109259 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 45-461
Cow position: chr5:25230865-25231288 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 43

Conread position: 46-267
Cow position: chr5:45419986-45420203 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 23

Conread position: 46-438
Cow position: chr5:52165026-52165433 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 272
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 38, 52

Conread position: 47-236
Cow position: chr5:63150018-63150205 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 19

Conread position: 47-429
Cow position: chr5:55966733-55967125 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 22

Conread position: 48-381
Cow position: chr5:44446716-44447081 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 37, 17

Conread position: 49-315
Cow position: chr5:56877630-56877356 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 16

Conread position: 49-323
Cow position: chr5:57101635-57101916 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 30

Conread position: 49-437
Cow position: chr5:28302593-28302990 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 52-463
Cow position: chr5:72564909-72564483 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 288
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 17, 29

Conread position: 53-451
Cow position: chr5:28945915-28946322 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 272
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 31, 13

Conread position: 55-416
Cow position: chr5:27171844-27172190 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 13, 110

Conread position: 56-245
Cow position: chr5:35982594-35982787 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 56-420
Cow position: chr5:6683226-6683581 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 245
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 13

Conread position: 56-466
Cow position: chr5:14314670-14314244 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 10

Conread position: 58-245
Cow position: chr5:67118562-67118372 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 8, 43

Conread position: 58-323
Cow position: chr5:20422052-20422319 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 81

Conread position: 58-418
Cow position: chr5:7723806-7723441 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 240
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 130

Conread position: 59-414
Cow position: chr5:8820874-8821239 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 6

Conread position: 59-466
Cow position: chr5:4166779-4166392 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 7

Conread position: 60-247
Cow position: chr5:56517243-56517054 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 76

Conread position: 60-261
Cow position: chr5:29912559-29912357 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 123

Conread position: 60-266
Cow position: chr5:7698139-7697938 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 50

Conread position: 60-354
Cow position: chr5:30949777-30950087 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 25, 5

Conread position: 60-418
Cow position: chr5:11229534-11229905 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 91

Conread position: 60-426
Cow position: chr5:38833260-38832878 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 92

Conread position: 60-466
Cow position: chr5:15364021-15363615 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 117

Conread position: 60-466
Cow position: chr5:41545754-41546168 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 139

Conread position: 60-471
Cow position: chr5:74016079-74015657 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 292
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 93

Conread position: 61-261
Cow position: chr5:66551758-66551961 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 61-276
Cow position: chr5:54375364-54375583 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 128

Conread position: 61-362
Cow position: chr5:59631610-59631306 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 148, 24

Conread position: 61-462
Cow position: chr5:6045434-6045012 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 404

Conread position: 62-429
Cow position: chr5:27306441-27306076 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 109

Conread position: 64-429
Cow position: chr5:67244053-67243682 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 81

Conread position: 64-466
Cow position: chr5:57934973-57935391 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 113

Conread position: 66-424
Cow position: chr5:53835849-53835478 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 52

Conread position: 66-440
Cow position: chr5:50821916-50821535 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 127

Conread position: 66-455
Cow position: chr5:63992039-63992431 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 259

Conread position: 66-466
Cow position: chr5:29903390-29903800 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 129

Conread position: 66-466
Cow position: chr5:30303024-30302620 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 69

Conread position: 69-245
Cow position: chr5:24136844-24136667 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 37

Conread position: 69-466
Cow position: chr5:56524304-56523896 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 300

Conread position: 70-466
Cow position: chr5:46509736-46510146 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 252

Conread position: 70-466
Cow position: chr5:62172541-62172128 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 119

Conread position: 74-381
Cow position: chr5:57575898-57575571 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 15, 0

Conread position: 77-400
Cow position: chr5:45804181-45803847 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 21

Conread position: 77-462
Cow position: chr5:60952781-60952388 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 263
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 121, 78

Conread position: 77-464
Cow position: chr5:4506844-4507237 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 259
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 142, 111

Conread position: 78-363
Cow position: chr5:57265784-57266074 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 127, 120

Conread position: 83-466
Cow position: chr5:20407563-20407941 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 183

Conread position: 85-450
Cow position: chr5:34050231-34049847 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 254
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 122, 378

Conread position: 92-405
Cow position: chr5:62142782-62142452 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 117, 173

Conread position: 92-466
Cow position: chr5:56467796-56467426 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 175, 18

Conread position: 96-237
Cow position: chr5:31052482-31052347 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 97-245
Cow position: chr5:43408257-43408405 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 118, 79

Conread position: 97-248
Cow position: chr5:63192640-63192791 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 109, 37

Conread position: 97-262
Cow position: chr5:26150320-26150484 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 97-370
Cow position: chr5:34625061-34624785 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 117

Conread position: 97-428
Cow position: chr5:33537970-33537653 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 97

Conread position: 97-441
Cow position: chr5:31640526-31640173 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 141

Conread position: 97-451
Cow position: chr5:64321855-64321485 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 114

Conread position: 97-454
Cow position: chr5:58793506-58793881 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 98

Conread position: 97-466
Cow position: chr5:15598137-15598512 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 11

Conread position: 98-330
Cow position: chr5:63865896-63865648 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 6, 36

Conread position: 98-462
Cow position: chr5:6528783-6528406 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 232

Conread position: 99-436
Cow position: chr5:65588798-65588463 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 98, 66

Conread position: 99-466
Cow position: chr5:34887096-34887476 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 262
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 74, 104

Conread position: 100-466
Cow position: chr5:17028193-17027820 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 256
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 94, 84

Conread position: 101-418
Cow position: chr5:16937925-16938239 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 97, 110

Conread position: 103-453
Cow position: chr5:24349202-24348849 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 175, 94

Conread position: 106-386
Cow position: chr5:45409415-45409126 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 176, 222

Conread position: 106-415
Cow position: chr5:65765037-65765340 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 84

Conread position: 106-457
Cow position: chr5:40889205-40889552 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 246
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 91, 115

Conread position: 106-466
Cow position: chr5:33080700-33081068 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 254
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 141, 95

Conread position: 113-466
Cow position: chr5:31144702-31145060 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 262
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 93, 176

Conread position: 115-440
Cow position: chr5:34638967-34638632 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 96

Conread position: 120-391
Cow position: chr5:35449314-35449049 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 96, 80

Conread position: 122-441
Cow position: chr5:32140632-32140959 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 219
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 84, 78

Conread position: 149-462
Cow position: chr5:4797274-4797587 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 129, 40

Conread position: 149-466
Cow position: chr5:70050791-70050476 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 79

Conread position: 152-466
Cow position: chr5:27015726-27015414 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 99, 45

Conread position: 156-466
Cow position: chr5:34916173-34915864 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 92

Conread position: 160-429
Cow position: chr5:72310741-72310471 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 105, 38

Conread position: 164-471
Cow position: chr5:19470156-19470466 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 51

Conread position: 165-466
Cow position: chr5:34288435-34288745 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 34, 134

Conread position: 173-462
Cow position: chr5:72150275-72149977 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 164

Conread position: 206-466
Cow position: chr5:60520155-60519897 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 67, 61

Conread position: 263-428
Cow position: chr5:34923193-34923348 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 0

Show alignments to all cow chromosomes.