Cow genome map

Conread name: Tes1-TES01C090030

Conread position: 5-348
Cow position: chr6:57571686-57571326 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 23, 61

Conread position: 9-466
Cow position: chr6:36196410-36195950 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 41

Conread position: 12-334
Cow position: chr6:38640436-38640094 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 5, 0

Conread position: 13-196
Cow position: chr6:1870997-1871182 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 55

Conread position: 13-208
Cow position: chr6:21470232-21470424 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 43

Conread position: 13-230
Cow position: chr6:58725567-58725358 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 60

Conread position: 13-237
Cow position: chr6:48097400-48097626 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 14, 32

Conread position: 13-237
Cow position: chr6:50504656-50504429 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 17, 30

Conread position: 13-237
Cow position: chr6:63066037-63065800 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 13-240
Cow position: chr6:36920775-36921002 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 70

Conread position: 13-256
Cow position: chr6:120440-120202 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 190, 16

Conread position: 13-256
Cow position: chr6:30024080-30023849 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 21

Conread position: 13-256
Cow position: chr6:67451168-67451415 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 233

Conread position: 13-258
Cow position: chr6:2078616-2078865 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 17, 65

Conread position: 13-261
Cow position: chr6:32287831-32287590 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 57

Conread position: 13-261
Cow position: chr6:68816371-68816118 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 128

Conread position: 13-262
Cow position: chr6:18117851-18118101 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 57

Conread position: 13-265
Cow position: chr6:60468436-60468185 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 18, 30

Conread position: 13-273
Cow position: chr6:693945-694208 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 52

Conread position: 13-297
Cow position: chr6:61524004-61524301 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 13-327
Cow position: chr6:25614890-25615226 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 232
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 18, 305

Conread position: 13-359
Cow position: chr6:19264298-19264658 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 54

Conread position: 13-386
Cow position: chr6:50577718-50577335 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 265
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 45

Conread position: 13-406
Cow position: chr6:53024611-53025003 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 272
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 200, 17

Conread position: 13-418
Cow position: chr6:5609242-5609657 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 152

Conread position: 13-418
Cow position: chr6:45690415-45690810 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 29

Conread position: 13-423
Cow position: chr6:38207285-38207717 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 169

Conread position: 13-425
Cow position: chr6:6063092-6063503 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 269
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 17, 56

Conread position: 13-428
Cow position: chr6:36203021-36202601 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 122

Conread position: 13-428
Cow position: chr6:53460372-53460798 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 30

Conread position: 13-429
Cow position: chr6:4383674-4383265 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 35

Conread position: 13-429
Cow position: chr6:24468199-24468620 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 302
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 43

Conread position: 13-429
Cow position: chr6:60143999-60144405 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 57

Conread position: 13-441
Cow position: chr6:38853456-38853898 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 90

Conread position: 13-449
Cow position: chr6:56850217-56849771 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 296
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 44, 17

Conread position: 13-462
Cow position: chr6:23696199-23695738 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 53

Conread position: 13-462
Cow position: chr6:47305542-47305068 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 321
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 16, 71

Conread position: 13-465
Cow position: chr6:61269511-61269072 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 53

Conread position: 13-466
Cow position: chr6:10105780-10106264 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 52

Conread position: 13-466
Cow position: chr6:65871231-65870760 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 17

Conread position: 13-467
Cow position: chr6:47520254-47519786 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 404

Conread position: 13-471
Cow position: chr6:46466018-46465559 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 43

Conread position: 13-472
Cow position: chr6:8637477-8637005 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 30

Conread position: 13-477
Cow position: chr6:15305771-15305314 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 125

Conread position: 13-477
Cow position: chr6:17414247-17414728 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 45

Conread position: 16-216
Cow position: chr6:58459914-58459718 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 16-259
Cow position: chr6:3351225-3350973 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 69, 0

Conread position: 16-261
Cow position: chr6:60273813-60274060 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 48

Conread position: 16-350
Cow position: chr6:6965197-6965534 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 225
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 93

Conread position: 16-363
Cow position: chr6:15243459-15243089 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 12, 0

Conread position: 16-395
Cow position: chr6:29485280-29484897 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 49

Conread position: 16-432
Cow position: chr6:52478214-52478658 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 51

Conread position: 16-439
Cow position: chr6:46859973-46860403 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 23

Conread position: 16-441
Cow position: chr6:26915525-26915090 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 51

Conread position: 16-450
Cow position: chr6:54133008-54132571 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 13

Conread position: 16-457
Cow position: chr6:32122092-32121656 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 65

Conread position: 16-466
Cow position: chr6:2547452-2546979 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 49

Conread position: 16-466
Cow position: chr6:13687619-13688075 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 41

Conread position: 17-428
Cow position: chr6:51581059-51581486 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 125

Conread position: 18-197
Cow position: chr6:1866922-1866747 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 31

Conread position: 18-440
Cow position: chr6:20097764-20098203 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 332

Conread position: 19-457
Cow position: chr6:48282189-48281740 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 301
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 11, 179

Conread position: 19-466
Cow position: chr6:6060376-6060821 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 178

Conread position: 19-466
Cow position: chr6:54365135-54365587 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 309
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 10, 58

Conread position: 22-466
Cow position: chr6:24901966-24902401 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 296
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 57, 5

Conread position: 23-466
Cow position: chr6:54867706-54867248 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 309
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 61, 19

Conread position: 24-399
Cow position: chr6:7128215-7128600 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 7, 34

Conread position: 27-353
Cow position: chr6:48112381-48112052 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 58, 40

Conread position: 27-395
Cow position: chr6:55545987-55546355 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 241
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 65

Conread position: 27-432
Cow position: chr6:34475373-34475774 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 262
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 215

Conread position: 27-462
Cow position: chr6:21535225-21534799 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 210

Conread position: 27-466
Cow position: chr6:35842845-35842397 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 305
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 13, 74

Conread position: 32-265
Cow position: chr6:37332290-37332055 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 34

Conread position: 32-386
Cow position: chr6:47799472-47799113 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 232
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 33

Conread position: 32-396
Cow position: chr6:6401129-6400753 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 30

Conread position: 38-428
Cow position: chr6:37149364-37148970 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 266
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 51, 160

Conread position: 39-379
Cow position: chr6:1499818-1499460 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 250
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 27, 60

Conread position: 39-428
Cow position: chr6:21869475-21869872 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 210

Conread position: 40-462
Cow position: chr6:49421616-49422042 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 297
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 20, 97

Conread position: 41-422
Cow position: chr6:53652210-53651818 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 28

Conread position: 42-438
Cow position: chr6:6201595-6201208 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 269
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 19, 13

Conread position: 42-441
Cow position: chr6:54990830-54991232 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 263

Conread position: 44-254
Cow position: chr6:60516992-60516786 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 25

Conread position: 44-261
Cow position: chr6:9302553-9302763 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 28

Conread position: 44-261
Cow position: chr6:17068480-17068697 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 20

Conread position: 44-261
Cow position: chr6:23465866-23466077 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 40, 22

Conread position: 44-376
Cow position: chr6:8125495-8125157 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 219
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 11

Conread position: 44-407
Cow position: chr6:38641660-38641292 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 257
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 40, 25

Conread position: 44-424
Cow position: chr6:55282125-55282513 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 278
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 41, 12

Conread position: 44-429
Cow position: chr6:44194383-44194773 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 21

Conread position: 44-441
Cow position: chr6:9736490-9736879 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 286
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 47

Conread position: 44-466
Cow position: chr6:64432105-64431678 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 287
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 95, 30

Conread position: 44-477
Cow position: chr6:13367454-13367025 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 294
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 10, 21

Conread position: 45-400
Cow position: chr6:63298868-63299222 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 226
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 222, 41

Conread position: 46-466
Cow position: chr6:7130713-7131135 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 268

Conread position: 46-466
Cow position: chr6:8209441-8209849 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 8

Conread position: 47-181
Cow position: chr6:23938228-23938091 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 48-232
Cow position: chr6:53090171-53089988 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 21

Conread position: 48-389
Cow position: chr6:47575071-47574717 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 247
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 41, 153

Conread position: 48-396
Cow position: chr6:63720364-63720004 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 244
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 32, 18

Conread position: 48-418
Cow position: chr6:8966260-8965873 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 49-396
Cow position: chr6:12091830-12092179 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 30, 20

Conread position: 49-428
Cow position: chr6:15300673-15301044 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 260
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 198, 29

Conread position: 51-319
Cow position: chr6:50976210-50975936 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 150

Conread position: 52-237
Cow position: chr6:49437492-49437308 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 11

Conread position: 53-248
Cow position: chr6:19259182-19259380 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 56-313
Cow position: chr6:58597350-58597620 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 13

Conread position: 56-450
Cow position: chr6:13040595-13040203 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 8

Conread position: 56-462
Cow position: chr6:12551427-12551008 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 89

Conread position: 57-261
Cow position: chr6:22985699-22985906 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 43

Conread position: 58-245
Cow position: chr6:66570595-66570405 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 58-380
Cow position: chr6:52901393-52901062 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 220
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 96

Conread position: 58-421
Cow position: chr6:35436149-35435783 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 231
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 250

Conread position: 58-428
Cow position: chr6:28976885-28977258 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 204

Conread position: 58-466
Cow position: chr6:26728378-26728790 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 118

Conread position: 59-232
Cow position: chr6:53546189-53546016 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 146

Conread position: 59-462
Cow position: chr6:49398466-49398876 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 118

Conread position: 60-259
Cow position: chr6:69500614-69500418 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 60-360
Cow position: chr6:58590426-58590115 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 24, 0

Conread position: 60-405
Cow position: chr6:51463481-51463820 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 36

Conread position: 60-419
Cow position: chr6:21736740-21737102 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 242
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 140, 60

Conread position: 60-465
Cow position: chr6:16352201-16352582 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 270
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 117

Conread position: 61-252
Cow position: chr6:32516958-32517139 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 64-466
Cow position: chr6:36470413-36470829 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 342

Conread position: 66-230
Cow position: chr6:4702677-4702842 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 83

Conread position: 66-261
Cow position: chr6:31078722-31078920 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 92, 146

Conread position: 66-333
Cow position: chr6:28999793-29000058 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 69, 129

Conread position: 66-429
Cow position: chr6:60350145-60350527 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 69-245
Cow position: chr6:60266039-60266214 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 102

Conread position: 69-307
Cow position: chr6:59603064-59603317 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 69-421
Cow position: chr6:35613273-35613629 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 188

Conread position: 69-466
Cow position: chr6:4864403-4864802 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 276
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 16, 248

Conread position: 69-466
Cow position: chr6:24031520-24031111 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 65

Conread position: 73-423
Cow position: chr6:38614952-38614602 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 14, 62

Conread position: 74-258
Cow position: chr6:32853326-32853141 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 11, 66

Conread position: 74-261
Cow position: chr6:59770363-59770179 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 44

Conread position: 77-466
Cow position: chr6:60474265-60473870 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 267
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 158, 121

Conread position: 82-429
Cow position: chr6:49002610-49002952 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 231
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 223, 61

Conread position: 83-237
Cow position: chr6:68685682-68685530 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 86-382
Cow position: chr6:37783526-37783233 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 140, 111

Conread position: 88-421
Cow position: chr6:899169-899504 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 175, 107

Conread position: 92-466
Cow position: chr6:51387868-51387502 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 246
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 8, 0

Conread position: 97-245
Cow position: chr6:34119239-34119387 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 42

Conread position: 97-261
Cow position: chr6:15022432-15022596 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 97-359
Cow position: chr6:47640317-47640595 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 150, 0

Conread position: 97-402
Cow position: chr6:21231639-21231335 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 101

Conread position: 97-403
Cow position: chr6:28318512-28318207 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 62, 40

Conread position: 97-428
Cow position: chr6:38218781-38218445 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 48

Conread position: 97-428
Cow position: chr6:66874466-66874135 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 121, 72

Conread position: 97-460
Cow position: chr6:31526161-31525794 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 109

Conread position: 98-354
Cow position: chr6:61608626-61608354 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 98-451
Cow position: chr6:31535455-31535821 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 305

Conread position: 99-265
Cow position: chr6:66375220-66375382 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 99-466
Cow position: chr6:28810885-28811259 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 252
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 98, 71

Conread position: 99-471
Cow position: chr6:29210608-29210233 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 70

Conread position: 106-415
Cow position: chr6:65702307-65702615 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 92, 121

Conread position: 108-426
Cow position: chr6:66088045-66087730 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 219
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 151, 60

Conread position: 109-450
Cow position: chr6:20330111-20329773 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 137

Conread position: 116-466
Cow position: chr6:1944809-1944466 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 39

Conread position: 122-408
Cow position: chr6:24962235-24961938 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 123-396
Cow position: chr6:21456594-21456885 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 99, 195

Conread position: 123-466
Cow position: chr6:11192375-11192716 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 146

Conread position: 126-265
Cow position: chr6:67615344-67615483 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 132-466
Cow position: chr6:17248798-17248468 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 71, 101

Conread position: 134-462
Cow position: chr6:18961438-18961782 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 5

Conread position: 135-466
Cow position: chr6:33865040-33865354 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 99

Conread position: 140-461
Cow position: chr6:49410625-49410943 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 75, 172

Conread position: 149-418
Cow position: chr6:6460605-6460325 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 52

Conread position: 152-421
Cow position: chr6:34031721-34031448 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 94, 62

Conread position: 171-465
Cow position: chr6:16411232-16410933 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 96, 40

Conread position: 189-454
Cow position: chr6:59276930-59277192 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 107, 76

Conread position: 195-434
Cow position: chr6:24917703-24917943 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 39

Conread position: 203-428
Cow position: chr6:1889080-1889308 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 113

Show alignments to all cow chromosomes.