Cow genome map
| Conread name: | Tes1-TES01C090030 |
| Conread position: | 4-428 |
| Cow position: | chrX:38642444-38642020 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 10-257 |
| Cow position: | chrX:19469322-19469563 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 11-261 |
| Cow position: | chrX:29050434-29050186 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 12-174 |
| Cow position: | chrX:32867061-32866900 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 5, 32 |
| Conread position: | 12-202 |
| Cow position: | chrX:39290544-39290356 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 19, 67 |
| Conread position: | 12-435 |
| Cow position: | chrX:27431730-27432166 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 46 |
| Conread position: | 12-460 |
| Cow position: | chrX:5118307-5118757 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 229 |
| Conread position: | 12-460 |
| Cow position: | chrX:41526343-41526790 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 309 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 77, 53 |
| Conread position: | 12-466 |
| Cow position: | chrX:9650836-9651322 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 333 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 6, 62 |
| Conread position: | 13-164 |
| Cow position: | chrX:34991550-34991399 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 13-195 |
| Cow position: | chrX:27668773-27668954 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 13-217 |
| Cow position: | chrX:16836105-16836304 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 43 |
| Conread position: | 13-237 |
| Cow position: | chrX:19394744-19394515 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 13-260 |
| Cow position: | chrX:45977114-45976862 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 13-261 |
| Cow position: | chrX:9251974-9252223 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 17, 175 |
| Conread position: | 13-261 |
| Cow position: | chrX:34836882-34837117 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 13-275 |
| Cow position: | chrX:20957428-20957176 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 17, 179 |
| Conread position: | 13-315 |
| Cow position: | chrX:34504864-34505178 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 13-319 |
| Cow position: | chrX:41871246-41870938 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 72, 16 |
| Conread position: | 13-321 |
| Cow position: | chrX:5919681-5919359 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 13-327 |
| Cow position: | chrX:34314210-34313890 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 13-359 |
| Cow position: | chrX:34792131-34792482 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 13-360 |
| Cow position: | chrX:27145788-27145451 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 13-380 |
| Cow position: | chrX:8869215-8869601 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 13-397 |
| Cow position: | chrX:29542039-29542428 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 278 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 17, 76 |
| Conread position: | 13-402 |
| Cow position: | chrX:34412037-34411625 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 294 |
| Conread position: | 13-407 |
| Cow position: | chrX:12979646-12980050 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 261 |
| Conread position: | 13-418 |
| Cow position: | chrX:35543073-35542661 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 13-418 |
| Cow position: | chrX:42380921-42381330 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 163 |
| Conread position: | 13-421 |
| Cow position: | chrX:9201731-9201314 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 13-426 |
| Cow position: | chrX:40035250-40035687 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 150 |
| Conread position: | 13-462 |
| Cow position: | chrX:13647595-13648057 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 167 |
| Conread position: | 13-462 |
| Cow position: | chrX:13913264-13912806 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 266 |
| Conread position: | 13-462 |
| Cow position: | chrX:22115126-22115555 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 192 |
| Conread position: | 13-466 |
| Cow position: | chrX:30337765-30338195 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 299 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 13, 120 |
| Conread position: | 13-466 |
| Cow position: | chrX:31436658-31436203 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 13-466 |
| Cow position: | chrX:34532707-34532254 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 13-466 |
| Cow position: | chrX:34554913-34554453 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 309 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 15, 60 |
| Conread position: | 13-471 |
| Cow position: | chrX:11656267-11655797 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 16-204 |
| Cow position: | chrX:2936139-2935952 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 16, 31 |
| Conread position: | 16-207 |
| Cow position: | chrX:12972864-12972673 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 16-260 |
| Cow position: | chrX:47345516-47345274 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 186 |
| Conread position: | 16-261 |
| Cow position: | chrX:40685143-40685392 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 16-363 |
| Cow position: | chrX:4278932-4279290 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 14, 64 |
| Conread position: | 16-390 |
| Cow position: | chrX:37780925-37781320 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 16-411 |
| Cow position: | chrX:1466346-1465964 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 16-426 |
| Cow position: | chrX:17795166-17794747 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 188 |
| Conread position: | 16-456 |
| Cow position: | chrX:37072572-37072139 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 41 |
| Conread position: | 16-466 |
| Cow position: | chrX:14883771-14884241 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 16-466 |
| Cow position: | chrX:22482503-22482966 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 123 |
| Conread position: | 16-466 |
| Cow position: | chrX:33855037-33855518 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 17-353 |
| Cow position: | chrX:14275563-14275901 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 17-466 |
| Cow position: | chrX:6414223-6413769 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 18-241 |
| Cow position: | chrX:16984819-16984586 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 18-466 |
| Cow position: | chrX:34377123-34376680 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 47 |
| Conread position: | 19-357 |
| Cow position: | chrX:31252591-31252248 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 93 |
| Conread position: | 19-408 |
| Cow position: | chrX:29601646-29602053 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 304 |
| Conread position: | 19-421 |
| Cow position: | chrX:17231920-17231501 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 276 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 19-428 |
| Cow position: | chrX:34543968-34543547 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 11, 83 |
| Conread position: | 19-441 |
| Cow position: | chrX:25815716-25816149 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 304 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 10, 73 |
| Conread position: | 19-466 |
| Cow position: | chrX:31948751-31949208 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 310 |
| Conread position: | 19-466 |
| Cow position: | chrX:34565468-34565023 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 305 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 11, 59 |
| Conread position: | 19-466 |
| Cow position: | chrX:40826567-40827024 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 11, 175 |
| Conread position: | 19-471 |
| Cow position: | chrX:12290901-12290454 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 81 |
| Conread position: | 19-471 |
| Cow position: | chrX:42246998-42247458 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 418 |
| Conread position: | 19-477 |
| Cow position: | chrX:47344482-47344006 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 443 |
| Conread position: | 21-423 |
| Cow position: | chrX:22074978-22074565 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 45 |
| Conread position: | 21-455 |
| Cow position: | chrX:45968327-45967896 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 296 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 9, 62 |
| Conread position: | 21-466 |
| Cow position: | chrX:42927648-42928059 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 24-423 |
| Cow position: | chrX:27515036-27514633 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 20, 147 |
| Conread position: | 26-247 |
| Cow position: | chrX:6599608-6599831 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 27-186 |
| Cow position: | chrX:29467608-29467765 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 58, 22 |
| Conread position: | 27-245 |
| Cow position: | chrX:22392814-22393031 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 58, 37 |
| Conread position: | 28-370 |
| Cow position: | chrX:45875557-45875216 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 250, 9 |
| Conread position: | 32-376 |
| Cow position: | chrX:42235353-42235722 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 32-428 |
| Cow position: | chrX:41884246-41884658 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 32-466 |
| Cow position: | chrX:878214-878645 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 33 |
| Conread position: | 37-422 |
| Cow position: | chrX:38549612-38549214 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 168 |
| Conread position: | 38-438 |
| Cow position: | chrX:13177314-13177717 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 176 |
| Conread position: | 39-236 |
| Cow position: | chrX:40531884-40532080 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 39-422 |
| Cow position: | chrX:32623731-32623349 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 34 |
| Conread position: | 39-428 |
| Cow position: | chrX:33493936-33493535 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 25 |
| Conread position: | 39-460 |
| Cow position: | chrX:31373695-31373303 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 289 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 41, 35 |
| Conread position: | 39-462 |
| Cow position: | chrX:38006613-38007041 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 11 |
| Conread position: | 42-466 |
| Cow position: | chrX:31250546-31250114 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 43-264 |
| Cow position: | chrX:18272900-18273122 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 93 |
| Conread position: | 44-254 |
| Cow position: | chrX:35985971-35985764 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 158, 25 |
| Conread position: | 44-325 |
| Cow position: | chrX:21986138-21986433 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 44-364 |
| Cow position: | chrX:169392-169702 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 44-372 |
| Cow position: | chrX:36068171-36067835 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 41, 225 |
| Conread position: | 44-379 |
| Cow position: | chrX:43730070-43730406 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 44-385 |
| Cow position: | chrX:33001059-33000706 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 44-425 |
| Cow position: | chrX:6690104-6690485 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 40, 155 |
| Conread position: | 44-428 |
| Cow position: | chrX:27393872-27394254 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 44-456 |
| Cow position: | chrX:17726130-17725711 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 25 |
| Conread position: | 44-462 |
| Cow position: | chrX:5017265-5017679 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 17, 56 |
| Conread position: | 44-466 |
| Cow position: | chrX:11717629-11718057 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 40 |
| Conread position: | 44-466 |
| Cow position: | chrX:40269648-40269199 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 221 |
| Conread position: | 45-261 |
| Cow position: | chrX:5135367-5135586 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 48, 133 |
| Conread position: | 45-265 |
| Cow position: | chrX:26881411-26881633 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 45-378 |
| Cow position: | chrX:31312182-31311835 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 45-462 |
| Cow position: | chrX:40557523-40557949 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 290 |
| Conread position: | 46-466 |
| Cow position: | chrX:29289730-29289299 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 48-237 |
| Cow position: | chrX:11325947-11326137 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 50, 8 |
| Conread position: | 48-247 |
| Cow position: | chrX:27306606-27306405 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 49-236 |
| Cow position: | chrX:41192853-41192664 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 49-261 |
| Cow position: | chrX:4152882-4153096 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 52-466 |
| Cow position: | chrX:42469794-42470214 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 53-399 |
| Cow position: | chrX:45846248-45845884 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 110 |
| Conread position: | 54-441 |
| Cow position: | chrX:11073045-11073444 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 182 |
| Conread position: | 58-226 |
| Cow position: | chrX:4615869-4616035 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 118, 136 |
| Conread position: | 59-243 |
| Cow position: | chrX:38560700-38560515 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 25, 166 |
| Conread position: | 60-208 |
| Cow position: | chrX:4467107-4466958 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 60-266 |
| Cow position: | chrX:46429679-46429886 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 24, 190 |
| Conread position: | 60-466 |
| Cow position: | chrX:7695888-7695486 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 64-340 |
| Cow position: | chrX:20584464-20584166 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 65-471 |
| Cow position: | chrX:42171162-42171578 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 7 |
| Conread position: | 66-297 |
| Cow position: | chrX:2523548-2523776 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 132 |
| Conread position: | 66-427 |
| Cow position: | chrX:11938798-11939163 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 135 |
| Conread position: | 66-462 |
| Cow position: | chrX:35224429-35224029 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 66-477 |
| Cow position: | chrX:37232541-37232124 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 67-237 |
| Cow position: | chrX:29585252-29585083 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 69-271 |
| Cow position: | chrX:33539301-33539099 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 16, 116 |
| Conread position: | 69-409 |
| Cow position: | chrX:37574971-37574635 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 139 |
| Conread position: | 69-461 |
| Cow position: | chrX:7278042-7277658 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 15, 127 |
| Conread position: | 72-456 |
| Cow position: | chrX:40183227-40183617 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 148, 125 |
| Conread position: | 80-273 |
| Cow position: | chrX:41111835-41111647 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 187, 45 |
| Conread position: | 80-378 |
| Cow position: | chrX:47362503-47362802 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 5, 222 |
| Conread position: | 83-265 |
| Cow position: | chrX:12082208-12082390 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 111, 56 |
| Conread position: | 88-426 |
| Cow position: | chrX:7509250-7508901 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 37 |
| Conread position: | 91-405 |
| Cow position: | chrX:37910553-37910235 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 112, 144 |
| Conread position: | 91-428 |
| Cow position: | chrX:26625563-26625917 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 91-462 |
| Cow position: | chrX:38936808-38936426 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 69, 62 |
| Conread position: | 91-466 |
| Cow position: | chrX:11082514-11082890 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 245 |
| Conread position: | 96-465 |
| Cow position: | chrX:44736897-44737267 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 140, 82 |
| Conread position: | 97-231 |
| Cow position: | chrX:19273605-19273744 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 97-323 |
| Cow position: | chrX:616157-616401 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 99, 117 |
| Conread position: | 97-419 |
| Cow position: | chrX:32431726-32431396 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 281 |
| Conread position: | 97-428 |
| Cow position: | chrX:38935381-38935041 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 134, 52 |
| Conread position: | 97-462 |
| Cow position: | chrX:27680500-27680126 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 253 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 113, 302 |
| Conread position: | 97-462 |
| Cow position: | chrX:45414202-45414573 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 100 |
| Conread position: | 98-466 |
| Cow position: | chrX:7572006-7571629 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 170 |
| Conread position: | 99-408 |
| Cow position: | chrX:9041144-9041449 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 33, 28 |
| Conread position: | 103-240 |
| Cow position: | chrX:44095356-44095218 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 103-428 |
| Cow position: | chrX:40692655-40692978 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 103, 73 |
| Conread position: | 105-446 |
| Cow position: | chrX:19690309-19689960 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 111, 80 |
| Conread position: | 106-457 |
| Cow position: | chrX:45403732-45404102 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 92, 355 |
| Conread position: | 107-429 |
| Cow position: | chrX:34662754-34663080 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 90, 98 |
| Conread position: | 110-386 |
| Cow position: | chrX:43973634-43973360 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 195, 157 |
| Conread position: | 123-428 |
| Cow position: | chrX:618926-619248 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 125-366 |
| Cow position: | chrX:13785286-13785536 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 83, 219 |
| Conread position: | 135-455 |
| Cow position: | chrX:34192734-34192414 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 243 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 112, 47 |
| Conread position: | 144-462 |
| Cow position: | chrX:34991091-34990768 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 198 |
| Conread position: | 149-466 |
| Cow position: | chrX:19015487-19015165 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 59, 162 |
| Conread position: | 178-411 |
| Cow position: | chrX:4750282-4750521 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 64, 167 |
| Conread position: | 178-422 |
| Cow position: | chrX:6640127-6639890 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 84, 20 |
| Conread position: | 178-466 |
| Cow position: | chrX:20583043-20582753 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 211-428 |
| Cow position: | chrX:31745073-31745287 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 105, 52 |
Show alignments to all cow chromosomes.