Cow genome map
| Conread name: | Tes1-TES01E120001 |
| Conread position: | 1-153 |
| Cow position: | chr13:21235383-21235236 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 146, 62 |
| Conread position: | 6-153 |
| Cow position: | chr13:21905232-21905375 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-137 |
| Cow position: | chr13:12283770-12283899 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-146 |
| Cow position: | chr13:34052287-34052149 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 106, 62 |
| Conread position: | 7-148 |
| Cow position: | chr13:20175054-20175187 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 7-148 |
| Cow position: | chr13:36771107-36770973 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-148 |
| Cow position: | chr13:41154758-41154615 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 82, 56 |
| Conread position: | 7-148 |
| Cow position: | chr13:42200973-42201112 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-149 |
| Cow position: | chr13:50681446-50681312 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 7-149 |
| Cow position: | chr13:61976650-61976517 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 129, 53 |
| Conread position: | 7-151 |
| Cow position: | chr13:23586473-23586617 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-151 |
| Cow position: | chr13:28683669-28683804 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 7-151 |
| Cow position: | chr13:49805283-49805419 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 7-151 |
| Cow position: | chr13:51901927-51902068 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 7-152 |
| Cow position: | chr13:1844812-1844675 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 74, 59 |
| Conread position: | 7-152 |
| Cow position: | chr13:11148077-11148215 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-152 |
| Cow position: | chr13:14063183-14063045 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-152 |
| Cow position: | chr13:38897941-38897798 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:185819-185964 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:1011647-1011786 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:1155393-1155255 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:4420625-4420764 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:5228881-5229020 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:6974480-6974624 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:11290501-11290357 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:16015130-16015269 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:19108227-19108372 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:19426383-19426244 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:20805202-20805341 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:21402480-21402336 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:21988790-21988652 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:24099672-24099533 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:24156184-24156322 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:25248829-25248685 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:32826092-32825953 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:42085122-42085267 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 53, 62 |
| Conread position: | 7-153 |
| Cow position: | chr13:46284282-46284135 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:46298155-46298001 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 136 |
| Conread position: | 7-153 |
| Cow position: | chr13:57444744-57444598 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 130, 61 |
| Conread position: | 7-153 |
| Cow position: | chr13:57769710-57769571 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-153 |
| Cow position: | chr13:60508808-60508669 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-155 |
| Cow position: | chr13:23266151-23266299 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-157 |
| Cow position: | chr13:25453485-25453629 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 148, 60 |
| Conread position: | 7-163 |
| Cow position: | chr13:5752111-5751958 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 8-153 |
| Cow position: | chr13:971580-971442 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 8-153 |
| Cow position: | chr13:22906601-22906744 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 8-153 |
| Cow position: | chr13:25062731-25062872 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 8-153 |
| Cow position: | chr13:26382914-26382767 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 8-153 |
| Cow position: | chr13:37978875-37978733 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 8-153 |
| Cow position: | chr13:40722373-40722230 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 8-153 |
| Cow position: | chr13:51941045-51941188 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 8-153 |
| Cow position: | chr13:53574315-53574453 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 114, 59 |
| Conread position: | 8-155 |
| Cow position: | chr13:47313212-47313354 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 122, 58 |
| Conread position: | 8-159 |
| Cow position: | chr13:34941341-34941197 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 8-159 |
| Cow position: | chr13:48251663-48251513 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 61 |
| Conread position: | 9-153 |
| Cow position: | chr13:60690402-60690263 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 10-152 |
| Cow position: | chr13:54094309-54094448 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 11-132 |
| Cow position: | chr13:34261568-34261687 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 11-138 |
| Cow position: | chr13:17970682-17970558 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 11-153 |
| Cow position: | chr13:2558191-2558057 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 11-153 |
| Cow position: | chr13:13576987-13577127 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 11-153 |
| Cow position: | chr13:45073102-45072967 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 11-153 |
| Cow position: | chr13:58742815-58742675 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 11-158 |
| Cow position: | chr13:44205369-44205516 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 11-164 |
| Cow position: | chr13:15872768-15872912 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 124, 39 |
| Conread position: | 12-128 |
| Cow position: | chr13:34299248-34299134 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 12-149 |
| Cow position: | chr13:11136097-11136236 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 12-153 |
| Cow position: | chr13:6079124-6078991 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 12-153 |
| Cow position: | chr13:38012992-38013132 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 12-162 |
| Cow position: | chr13:53535983-53535835 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 13-158 |
| Cow position: | chr13:48038447-48038585 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 14-153 |
| Cow position: | chr13:19393575-19393707 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.