Cow genome map
| Conread name: | Tes1-TES01E120001 |
| Conread position: | 2-153 |
| Cow position: | chr16:56533548-56533399 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 4-149 |
| Cow position: | chr16:53267397-53267254 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-152 |
| Cow position: | chr16:18071992-18071841 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 4-153 |
| Cow position: | chr16:44899044-44899191 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 6-153 |
| Cow position: | chr16:13989657-13989517 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 6-162 |
| Cow position: | chr16:35343777-35343924 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 7-135 |
| Cow position: | chr16:55308865-55308991 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 7-141 |
| Cow position: | chr16:8438943-8439077 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 123, 62 |
| Conread position: | 7-141 |
| Cow position: | chr16:39164932-39164806 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 7-141 |
| Cow position: | chr16:46223305-46223438 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 7-149 |
| Cow position: | chr16:7549433-7549295 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 96, 61 |
| Conread position: | 7-150 |
| Cow position: | chr16:5416082-5416224 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 7-151 |
| Cow position: | chr16:13177070-13176929 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-151 |
| Cow position: | chr16:13792203-13792061 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 7-151 |
| Cow position: | chr16:16402658-16402801 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 7-151 |
| Cow position: | chr16:29654998-29654855 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 7-151 |
| Cow position: | chr16:37453133-37453267 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 7-152 |
| Cow position: | chr16:16280742-16280885 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 124, 61 |
| Conread position: | 7-153 |
| Cow position: | chr16:498765-498620 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:2308114-2307969 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:3633786-3633647 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:4972355-4972494 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 138, 59 |
| Conread position: | 7-153 |
| Cow position: | chr16:7456786-7456925 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:7917472-7917333 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:8807420-8807553 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:9235825-9235969 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:11103167-11103313 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:11523279-11523419 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:13601412-13601557 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:14722071-14722209 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:14758385-14758247 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:16096416-16096271 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:18205631-18205492 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:18758169-18758307 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:19670889-19671033 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:24445931-24445785 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:28112244-28112389 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:30311435-30311574 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:30639009-30638862 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:31122584-31122723 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:32781053-32780914 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:33226861-33226999 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:35187924-35187780 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 100, 34 |
| Conread position: | 7-153 |
| Cow position: | chr16:39646230-39646091 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:44676561-44676418 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 7-153 |
| Cow position: | chr16:46654821-46654683 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:49449676-49449815 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:49515583-49515722 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:51042310-51042449 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 7-153 |
| Cow position: | chr16:53409582-53409716 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-155 |
| Cow position: | chr16:29558210-29558358 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-155 |
| Cow position: | chr16:40333651-40333792 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-158 |
| Cow position: | chr16:18141656-18141798 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 7-158 |
| Cow position: | chr16:40561896-40561752 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 7-158 |
| Cow position: | chr16:41689020-41688870 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 7-158 |
| Cow position: | chr16:47368181-47368031 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 7-159 |
| Cow position: | chr16:14028947-14029098 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 122, 62 |
| Conread position: | 7-159 |
| Cow position: | chr16:45731702-45731844 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 7-159 |
| Cow position: | chr16:46552477-46552332 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 7-162 |
| Cow position: | chr16:23475763-23475616 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-162 |
| Cow position: | chr16:34998934-34999080 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 8-150 |
| Cow position: | chr16:33704475-33704340 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 8-151 |
| Cow position: | chr16:659763-659624 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 8-151 |
| Cow position: | chr16:11007931-11007789 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 122, 43 |
| Conread position: | 8-151 |
| Cow position: | chr16:25174440-25174299 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 8-151 |
| Cow position: | chr16:42752549-42752407 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 8-153 |
| Cow position: | chr16:48398574-48398712 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 8-153 |
| Cow position: | chr16:50712238-50712376 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 8-153 |
| Cow position: | chr16:51043308-51043164 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 10-158 |
| Cow position: | chr16:13181165-13181021 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 11-139 |
| Cow position: | chr16:45654367-45654493 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 11-153 |
| Cow position: | chr16:11568443-11568578 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 11-153 |
| Cow position: | chr16:27706552-27706686 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 11-153 |
| Cow position: | chr16:31978522-31978657 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 11-153 |
| Cow position: | chr16:43813752-43813611 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 11-153 |
| Cow position: | chr16:49253071-49253207 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 122, 37 |
| Conread position: | 11-153 |
| Cow position: | chr16:54226118-54226257 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 11-156 |
| Cow position: | chr16:28021866-28022010 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 13-153 |
| Cow position: | chr16:50453297-50453164 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 27, 20 |
| Conread position: | 18-153 |
| Cow position: | chr16:15805496-15805364 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 18-153 |
| Cow position: | chr16:32327319-32327191 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.