Cow genome map
| Conread name: | Tes1-TES01E120001 |
| Conread position: | 1-153 |
| Cow position: | chr17:24534768-24534625 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 7-114 |
| Cow position: | chr17:6848605-6848499 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 7-122 |
| Cow position: | chr17:3498953-3499067 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-150 |
| Cow position: | chr17:2034261-2034118 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 117, 32 |
| Conread position: | 7-151 |
| Cow position: | chr17:6623395-6623258 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 7-151 |
| Cow position: | chr17:18266773-18266636 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 7-151 |
| Cow position: | chr17:20800527-20800390 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 7-151 |
| Cow position: | chr17:40771539-40771399 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 7-153 |
| Cow position: | chr17:2270479-2270335 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 7-153 |
| Cow position: | chr17:5896201-5896340 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-153 |
| Cow position: | chr17:6423439-6423299 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 96, 53 |
| Conread position: | 7-153 |
| Cow position: | chr17:6566190-6566051 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 7-153 |
| Cow position: | chr17:9060301-9060447 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-153 |
| Cow position: | chr17:11102072-11102218 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 124, 62 |
| Conread position: | 7-153 |
| Cow position: | chr17:12289708-12289847 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-153 |
| Cow position: | chr17:23337303-23337442 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-153 |
| Cow position: | chr17:24334398-24334259 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 7-153 |
| Cow position: | chr17:27305874-27305737 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 7-153 |
| Cow position: | chr17:28359544-28359398 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 124, 62 |
| Conread position: | 7-153 |
| Cow position: | chr17:29292657-29292804 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 122, 61 |
| Conread position: | 7-153 |
| Cow position: | chr17:29356564-29356710 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 7-153 |
| Cow position: | chr17:29715475-29715617 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 115, 58 |
| Conread position: | 7-153 |
| Cow position: | chr17:29810363-29810225 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 7-153 |
| Cow position: | chr17:32280165-32280305 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 139, 59 |
| Conread position: | 7-153 |
| Cow position: | chr17:32472119-32472258 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-153 |
| Cow position: | chr17:32651327-32651189 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-153 |
| Cow position: | chr17:34317006-34317145 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-153 |
| Cow position: | chr17:36790820-36790681 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-153 |
| Cow position: | chr17:37773847-37773994 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 7-153 |
| Cow position: | chr17:41014925-41014781 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-156 |
| Cow position: | chr17:25077114-25077256 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-159 |
| Cow position: | chr17:20808245-20808094 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 126, 69 |
| Conread position: | 7-162 |
| Cow position: | chr17:27679533-27679691 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 152 |
| Conread position: | 7-187 |
| Cow position: | chr17:42258617-42258444 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 43, 49 |
| Conread position: | 7-219 |
| Cow position: | chr17:4107305-4107503 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 7-219 |
| Cow position: | chr17:4123041-4123239 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 8-150 |
| Cow position: | chr17:28539753-28539616 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 8-152 |
| Cow position: | chr17:18814916-18814770 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 8-152 |
| Cow position: | chr17:18884615-18884752 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 8-152 |
| Cow position: | chr17:41029662-41029519 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 8-153 |
| Cow position: | chr17:3042205-3042061 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 8-153 |
| Cow position: | chr17:5748090-5748237 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 8-153 |
| Cow position: | chr17:25140963-25140824 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 8-153 |
| Cow position: | chr17:30539539-30539677 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 8-153 |
| Cow position: | chr17:30712750-30712612 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 8-153 |
| Cow position: | chr17:32989203-32989067 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 8-153 |
| Cow position: | chr17:32993903-32994039 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 8-153 |
| Cow position: | chr17:35223259-35223121 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 8-156 |
| Cow position: | chr17:13143972-13144113 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 8-158 |
| Cow position: | chr17:20993330-20993475 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 9-153 |
| Cow position: | chr17:38363549-38363692 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 36, 61 |
| Conread position: | 11-153 |
| Cow position: | chr17:7614935-7615076 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 57 |
| Conread position: | 11-153 |
| Cow position: | chr17:8995681-8995816 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 11-153 |
| Cow position: | chr17:14003536-14003402 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 11-153 |
| Cow position: | chr17:27667487-27667622 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 119, 56 |
| Conread position: | 13-152 |
| Cow position: | chr17:8926523-8926662 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-153 |
| Cow position: | chr17:12059388-12059520 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 13-153 |
| Cow position: | chr17:20269317-20269184 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 29-147 |
| Cow position: | chr17:44233388-44233505 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 30-155 |
| Cow position: | chr17:5361362-5361487 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.