Cow genome map
| Conread name: | Tes1-TES01E120001 |
| Conread position: | 5-153 |
| Cow position: | chr29:15289416-15289260 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 6-153 |
| Cow position: | chr29:34552122-34551982 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 53 |
| Conread position: | 7-132 |
| Cow position: | chr29:11365926-11365798 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 94, 64 |
| Conread position: | 7-137 |
| Cow position: | chr29:6217885-6218015 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 7-147 |
| Cow position: | chr29:6771655-6771517 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 7-149 |
| Cow position: | chr29:42709106-42709241 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-150 |
| Cow position: | chr29:8667482-8667346 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-151 |
| Cow position: | chr29:9332813-9332677 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-151 |
| Cow position: | chr29:28775779-28775925 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 114, 62 |
| Conread position: | 7-151 |
| Cow position: | chr29:29770817-29770954 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-153 |
| Cow position: | chr29:2136430-2136575 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 7-153 |
| Cow position: | chr29:4875235-4875375 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 93, 60 |
| Conread position: | 7-153 |
| Cow position: | chr29:5948118-5948265 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 62 |
| Conread position: | 7-153 |
| Cow position: | chr29:8681281-8681420 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-153 |
| Cow position: | chr29:9137966-9137829 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-153 |
| Cow position: | chr29:9638643-9638782 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-153 |
| Cow position: | chr29:10818992-10819135 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 124, 61 |
| Conread position: | 7-153 |
| Cow position: | chr29:11696209-11696064 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 7-153 |
| Cow position: | chr29:19761944-19761805 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-153 |
| Cow position: | chr29:19792598-19792736 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 7-153 |
| Cow position: | chr29:21665644-21665505 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-153 |
| Cow position: | chr29:24345795-24345935 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 7-153 |
| Cow position: | chr29:27858482-27858340 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 7-153 |
| Cow position: | chr29:29066096-29065957 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-153 |
| Cow position: | chr29:32644584-32644439 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-153 |
| Cow position: | chr29:32963209-32963066 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 7-153 |
| Cow position: | chr29:35738835-35738974 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-153 |
| Cow position: | chr29:37719581-37719436 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 7-158 |
| Cow position: | chr29:5062826-5062682 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-158 |
| Cow position: | chr29:19428342-19428192 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 63 |
| Conread position: | 7-164 |
| Cow position: | chr29:6150392-6150548 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 8-114 |
| Cow position: | chr29:24952354-24952250 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 8-153 |
| Cow position: | chr29:7956297-7956435 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 8-153 |
| Cow position: | chr29:13058609-13058465 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 8-153 |
| Cow position: | chr29:18879000-18879138 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 8-153 |
| Cow position: | chr29:26263523-26263384 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 8-153 |
| Cow position: | chr29:32733002-32732864 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 8-153 |
| Cow position: | chr29:34745986-34746124 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 8-158 |
| Cow position: | chr29:4692145-4692291 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 8-162 |
| Cow position: | chr29:984532-984385 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 115, 54 |
| Conread position: | 8-162 |
| Cow position: | chr29:7664096-7664246 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 18 |
| Conread position: | 11-153 |
| Cow position: | chr29:6871376-6871511 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 11-162 |
| Cow position: | chr29:40337867-40338017 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 13-153 |
| Cow position: | chr29:37600226-37600364 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 14-151 |
| Cow position: | chr29:109343-109206 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 117, 55 |
| Conread position: | 14-153 |
| Cow position: | chr29:17154147-17154011 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 14-153 |
| Cow position: | chr29:36428623-36428755 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 15-151 |
| Cow position: | chr29:17668167-17668025 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 16-151 |
| Cow position: | chr29:94907-95047 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 26-162 |
| Cow position: | chr29:10236777-10236904 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
Show alignments to all cow chromosomes.