Cow genome map
| Conread name: | Tes1-TES01E120001 | 
| Conread position: | 1-153 | 
| Cow position: | chr3:49428826-49428976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 40, 32 | 
| Conread position: | 5-153 | 
| Cow position: | chr3:68156130-68155988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 124, 61 | 
| Conread position: | 6-151 | 
| Cow position: | chr3:33693273-33693130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 6-153 | 
| Cow position: | chr3:14717462-14717316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 140, 63 | 
| Conread position: | 6-153 | 
| Cow position: | chr3:26920547-26920404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 6-153 | 
| Cow position: | chr3:58540891-58541031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 6-153 | 
| Cow position: | chr3:83920630-83920775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 6-162 | 
| Cow position: | chr3:18854611-18854458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 7-114 | 
| Cow position: | chr3:82460819-82460713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 108 | 
| Alignm identity: | 87 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 7-128 | 
| Cow position: | chr3:50329428-50329546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 7-137 | 
| Cow position: | chr3:74847102-74847233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 7-141 | 
| Cow position: | chr3:48629966-48630099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 7-145 | 
| Cow position: | chr3:4319342-4319473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 7-149 | 
| Cow position: | chr3:1299906-1299768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 7-150 | 
| Cow position: | chr3:16656819-16656956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 7-151 | 
| Cow position: | chr3:3890028-3890166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 115, 44 | 
| Conread position: | 7-151 | 
| Cow position: | chr3:30908300-30908442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 7-151 | 
| Cow position: | chr3:64683016-64683146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 7-152 | 
| Cow position: | chr3:22716656-22716794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 7-152 | 
| Cow position: | chr3:51506572-51506429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 7-152 | 
| Cow position: | chr3:83201846-83201981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:2334932-2334793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:6882949-6882804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:8901063-8900920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:11819607-11819466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 79, 44 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:14280491-14280352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:14456256-14456394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:14626503-14626647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:14724945-14724806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:16890362-16890223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:17331415-17331276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:19711668-19711807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 123, 53 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:22271874-22272016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:23876293-23876154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:24639237-24639085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:25691377-25691239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:29360516-29360652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:29507198-29507056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:31419343-31419203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 123, 53 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:39171857-39172003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:45647302-45647164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:45668240-45668378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:49650028-49649890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:55110196-55110335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:61262468-61262329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:63238205-63238351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 79, 61 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:64279096-64278955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:64536895-64537041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:70321306-70321445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:72776887-72776745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:79375621-79375475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 29, 128 | 
| Conread position: | 7-153 | 
| Cow position: | chr3:80564608-80564465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 56, 70 | 
| Conread position: | 7-154 | 
| Cow position: | chr3:20780231-20780373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 7-155 | 
| Cow position: | chr3:70130173-70130318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 7-159 | 
| Cow position: | chr3:49218660-49218805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 7-160 | 
| Cow position: | chr3:56704927-56705082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 109, 42 | 
| Conread position: | 7-162 | 
| Cow position: | chr3:24262041-24262195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 132, 62 | 
| Conread position: | 7-162 | 
| Cow position: | chr3:30179731-30179583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 7-162 | 
| Cow position: | chr3:48296358-48296202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 108, 62 | 
| Conread position: | 7-162 | 
| Cow position: | chr3:48811338-48811486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 124, 59 | 
| Conread position: | 8-119 | 
| Cow position: | chr3:77226968-77226858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 8-146 | 
| Cow position: | chr3:65968807-65968670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 8-151 | 
| Cow position: | chr3:20389763-20389904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 8-151 | 
| Cow position: | chr3:25673478-25673620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 8-151 | 
| Cow position: | chr3:65236665-65236526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 41, 61 | 
| Conread position: | 8-151 | 
| Cow position: | chr3:69962064-69962206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 114, 0 | 
| Conread position: | 8-151 | 
| Cow position: | chr3:72390729-72390593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 8-152 | 
| Cow position: | chr3:24872405-24872266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 88, 58 | 
| Conread position: | 8-153 | 
| Cow position: | chr3:9843224-9843082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 8-153 | 
| Cow position: | chr3:15191999-15191861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 8-153 | 
| Cow position: | chr3:17895460-17895316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 8-153 | 
| Cow position: | chr3:18887225-18887086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 121, 43 | 
| Conread position: | 8-153 | 
| Cow position: | chr3:26554068-26554220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 8-153 | 
| Cow position: | chr3:38497590-38497441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 8-153 | 
| Cow position: | chr3:45214988-45215126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 8-153 | 
| Cow position: | chr3:48252541-48252403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 8-153 | 
| Cow position: | chr3:49132603-49132747 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 8-153 | 
| Cow position: | chr3:59208392-59208255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 8-153 | 
| Cow position: | chr3:59333377-59333235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 8-153 | 
| Cow position: | chr3:75157545-75157683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 8-158 | 
| Cow position: | chr3:43528591-43528734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 8-158 | 
| Cow position: | chr3:52418585-52418438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 8-164 | 
| Cow position: | chr3:82277293-82277138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 8-171 | 
| Cow position: | chr3:67165588-67165424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 56, 153 | 
| Conread position: | 8-171 | 
| Cow position: | chr3:79902149-79901995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 9-151 | 
| Cow position: | chr3:58971548-58971413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 9-153 | 
| Cow position: | chr3:74561751-74561894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 9-158 | 
| Cow position: | chr3:56476230-56476087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 73, 57 | 
| Conread position: | 10-161 | 
| Cow position: | chr3:52652522-52652677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 72, 58 | 
| Conread position: | 11-135 | 
| Cow position: | chr3:15548908-15548785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 11-149 | 
| Cow position: | chr3:14602099-14602234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 69, 50 | 
| Conread position: | 11-149 | 
| Cow position: | chr3:18758594-18758731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 11-151 | 
| Cow position: | chr3:62883620-62883483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 11-153 | 
| Cow position: | chr3:17899467-17899326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 57, 41 | 
| Conread position: | 11-153 | 
| Cow position: | chr3:51032988-51032853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 11-153 | 
| Cow position: | chr3:80740234-80740090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 11-153 | 
| Cow position: | chr3:80760020-80759885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 11-159 | 
| Cow position: | chr3:11254503-11254643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 37, 45 | 
| Conread position: | 11-159 | 
| Cow position: | chr3:74391097-74391237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 12-153 | 
| Cow position: | chr3:79208347-79208480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 12-153 | 
| Cow position: | chr3:82075446-82075591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 13-152 | 
| Cow position: | chr3:37628698-37628560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 14-153 | 
| Cow position: | chr3:73764533-73764671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 14-153 | 
| Cow position: | chr3:79094426-79094557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 15-153 | 
| Cow position: | chr3:31225094-31224963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 20-153 | 
| Cow position: | chr3:63737764-63737635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 29-153 | 
| Cow position: | chr3:66014014-66013890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
Show alignments to all cow chromosomes.
