Cow genome map

Conread name: Tes1-TES01E120001

Conread position: 4-121
Cow position: chrX:17888681-17888798 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 49, 66

Conread position: 7-132
Cow position: chrX:30833725-30833848 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 7-134
Cow position: chrX:18695224-18695349 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 7-135
Cow position: chrX:10916451-10916324 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 7-149
Cow position: chrX:13404648-13404790 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 7-149
Cow position: chrX:31260934-31261074 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 7-149
Cow position: chrX:37118602-37118462 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 7-149
Cow position: chrX:42221871-42222006 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 7-150
Cow position: chrX:12249498-12249362 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 7-151
Cow position: chrX:1978192-1978050 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 7-151
Cow position: chrX:9635555-9635693 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 42, 60

Conread position: 7-151
Cow position: chrX:11073508-11073651 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 120
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 62, 0

Conread position: 7-151
Cow position: chrX:32871089-32871226 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 7-151
Cow position: chrX:38936396-38936252 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 128

Conread position: 7-151
Cow position: chrX:39939051-39939194 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 7-151
Cow position: chrX:43980449-43980305 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-152
Cow position: chrX:917673-917818 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 122
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 109, 56

Conread position: 7-152
Cow position: chrX:1499291-1499147 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 7-152
Cow position: chrX:27680059-27679910 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 62

Conread position: 7-153
Cow position: chrX:2351759-2351620 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 7-153
Cow position: chrX:4750676-4750814 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 7-153
Cow position: chrX:6766041-6766187 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 130, 64

Conread position: 7-153
Cow position: chrX:7513188-7513049 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 7-153
Cow position: chrX:8899721-8899583 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 7-153
Cow position: chrX:9854976-9854831 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 7-153
Cow position: chrX:9953817-9953673 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 7-153
Cow position: chrX:10437954-10438093 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 7-153
Cow position: chrX:10960362-10960216 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 26, 62

Conread position: 7-153
Cow position: chrX:13177760-13177902 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 7-153
Cow position: chrX:14974031-14974180 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 55

Conread position: 7-153
Cow position: chrX:15329350-15329211 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 7-153
Cow position: chrX:16324550-16324695 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 7-153
Cow position: chrX:17497793-17497654 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 7-153
Cow position: chrX:17663215-17663360 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 7-153
Cow position: chrX:20504464-20504320 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 7-153
Cow position: chrX:20801474-20801330 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 7-153
Cow position: chrX:21665894-21666033 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 7-153
Cow position: chrX:23970055-23969915 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 124, 59

Conread position: 7-153
Cow position: chrX:25816558-25816697 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 7-153
Cow position: chrX:33803318-33803463 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 7-153
Cow position: chrX:34238417-34238278 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 7-153
Cow position: chrX:34441750-34441889 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 7-153
Cow position: chrX:35288357-35288212 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 7-153
Cow position: chrX:36250165-36250306 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 53

Conread position: 7-153
Cow position: chrX:38963808-38963671 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 7-153
Cow position: chrX:39126017-39125872 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 7-153
Cow position: chrX:41067536-41067391 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 7-153
Cow position: chrX:41157008-41156869 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 7-153
Cow position: chrX:45967859-45967719 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 7-155
Cow position: chrX:28847179-28847326 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 123
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 62, 0

Conread position: 7-158
Cow position: chrX:29032083-29031932 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 59, 65

Conread position: 7-158
Cow position: chrX:33493429-33493285 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 7-158
Cow position: chrX:42530210-42530353 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 7-159
Cow position: chrX:30093667-30093811 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 7-160
Cow position: chrX:34993873-34993722 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 7-162
Cow position: chrX:1728871-1729026 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 56, 120

Conread position: 7-162
Cow position: chrX:6695647-6695801 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 7-162
Cow position: chrX:37831770-37831923 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 62

Conread position: 8-127
Cow position: chrX:22284210-22284092 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 8-131
Cow position: chrX:1616355-1616477 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 8-151
Cow position: chrX:12115737-12115601 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 8-151
Cow position: chrX:36975540-36975404 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 8-151
Cow position: chrX:40452517-40452660 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 70, 119

Conread position: 8-153
Cow position: chrX:10866171-10866309 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 8-153
Cow position: chrX:13266128-13266272 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 129, 61

Conread position: 8-153
Cow position: chrX:15007455-15007593 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 8-153
Cow position: chrX:19930127-19929986 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 8-153
Cow position: chrX:22624152-22624010 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 8-153
Cow position: chrX:38999599-38999454 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 138, 131

Conread position: 8-153
Cow position: chrX:42499372-42499516 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 8-153
Cow position: chrX:44901847-44901702 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 8-155
Cow position: chrX:6203206-6203063 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 8-159
Cow position: chrX:160336-160487 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 119

Conread position: 8-166
Cow position: chrX:20709734-20709578 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 156, 61

Conread position: 11-141
Cow position: chrX:29876358-29876486 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 11-152
Cow position: chrX:4044165-4044299 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 11-153
Cow position: chrX:35609679-35609544 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 11-153
Cow position: chrX:39351952-39352097 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 11-153
Cow position: chrX:40481178-40481312 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 11-161
Cow position: chrX:16416160-16416018 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 13-153
Cow position: chrX:21861979-21862112 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 13-153
Cow position: chrX:40269167-40269034 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 13-160
Cow position: chrX:17794686-17794546 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 15-153
Cow position: chrX:31251954-31251823 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 28-153
Cow position: chrX:27395317-27395441 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.