Cow genome map
Conread name: | Thy1-THY010006F03 |
Conread position: | 10-322 |
Cow position: | chr1:39628036-39627736 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 200 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 144, 0 |
Conread position: | 22-227 |
Cow position: | chr1:23624883-23625079 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 156 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 35, 108 |
Conread position: | 22-334 |
Cow position: | chr1:81292761-81293069 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 224 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 36, 16 |
Conread position: | 23-228 |
Cow position: | chr1:87914665-87914470 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 161 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 18, 38 |
Conread position: | 25-180 |
Cow position: | chr1:25954237-25954387 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 119 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 143, 33 |
Conread position: | 26-322 |
Cow position: | chr1:31233050-31232770 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 223 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 29, 62 |
Conread position: | 31-299 |
Cow position: | chr1:49728169-49728443 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 204 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 26, 7 |
Conread position: | 31-338 |
Cow position: | chr1:88017539-88017232 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 8 |
Conread position: | 32-158 |
Cow position: | chr1:30042023-30042151 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 106 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 26, 51 |
Conread position: | 32-210 |
Cow position: | chr1:90370656-90370479 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 142 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 24, 59 |
Conread position: | 32-215 |
Cow position: | chr1:19439506-19439323 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 140 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 27, 149 |
Conread position: | 32-244 |
Cow position: | chr1:56858515-56858734 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 164 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 26, 106 |
Conread position: | 32-277 |
Cow position: | chr1:100132178-100132419 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 180 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 140, 21 |
Conread position: | 32-281 |
Cow position: | chr1:74713756-74713997 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 193 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 26, 17 |
Conread position: | 32-327 |
Cow position: | chr1:61242009-61242307 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 68 |
Conread position: | 32-332 |
Cow position: | chr1:40420160-40419867 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 220 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 223, 54 |
Conread position: | 32-332 |
Cow position: | chr1:57077297-57077615 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 221 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 49, 93 |
Conread position: | 32-333 |
Cow position: | chr1:64098986-64098685 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 31 |
Conread position: | 32-333 |
Cow position: | chr1:82572952-82572650 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 103 |
Conread position: | 32-334 |
Cow position: | chr1:14560244-14559957 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 232 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 26, 88 |
Conread position: | 32-334 |
Cow position: | chr1:37432669-37432977 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 203 |
Conread position: | 32-334 |
Cow position: | chr1:39244269-39243952 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 232 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 26, 128 |
Conread position: | 32-335 |
Cow position: | chr1:6985544-6985253 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 132 |
Conread position: | 32-336 |
Cow position: | chr1:56233171-56233473 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 221 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 26, 101 |
Conread position: | 32-337 |
Cow position: | chr1:85525-85833 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 118 |
Conread position: | 32-337 |
Cow position: | chr1:3750197-3750493 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 26 |
Conread position: | 32-340 |
Cow position: | chr1:46268755-46268444 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 236 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 17, 52 |
Conread position: | 32-340 |
Cow position: | chr1:101883904-101884210 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 57 |
Conread position: | 33-316 |
Cow position: | chr1:71555517-71555222 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 159 |
Conread position: | 33-334 |
Cow position: | chr1:9511984-9511695 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 223 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 25, 83 |
Conread position: | 49-355 |
Cow position: | chr1:37465703-37465420 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 218 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 116, 12 |
Conread position: | 52-326 |
Cow position: | chr1:65155462-65155188 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 125 |
Conread position: | 53-247 |
Cow position: | chr1:3020464-3020267 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 142 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 53-299 |
Cow position: | chr1:8726399-8726147 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 185 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 73, 6 |
Conread position: | 53-310 |
Cow position: | chr1:41092854-41092598 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 195 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 192, 77 |
Conread position: | 53-312 |
Cow position: | chr1:64479652-64479391 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 194 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 49, 83 |
Conread position: | 53-326 |
Cow position: | chr1:85409551-85409279 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 199, 90 |
Conread position: | 53-330 |
Cow position: | chr1:2599407-2599128 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 204 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 177, 79 |
Conread position: | 53-334 |
Cow position: | chr1:11831637-11831903 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 208 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 199, 18 |
Conread position: | 53-334 |
Cow position: | chr1:18223550-18223281 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 77 |
Conread position: | 53-337 |
Cow position: | chr1:28512329-28512058 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 202 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 53-337 |
Cow position: | chr1:93832302-93832575 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 191 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 53-340 |
Cow position: | chr1:34892884-34893175 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 77 |
Conread position: | 54-334 |
Cow position: | chr1:28408199-28407926 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 201 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 54, 99 |
Conread position: | 54-341 |
Cow position: | chr1:25885781-25885501 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 212 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 144, 76 |
Conread position: | 55-332 |
Cow position: | chr1:52207310-52207581 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 208 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 183, 92 |
Conread position: | 55-334 |
Cow position: | chr1:81371148-81370882 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 202 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 198, 46 |
Conread position: | 55-336 |
Cow position: | chr1:82387248-82387523 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 194 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 57-333 |
Cow position: | chr1:45978976-45979236 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 208 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 53, 73 |
Conread position: | 57-341 |
Cow position: | chr1:37739470-37739195 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 211 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 22, 114 |
Conread position: | 57-343 |
Cow position: | chr1:77755401-77755106 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 58-292 |
Cow position: | chr1:40222480-40222263 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 172 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 194, 25 |
Conread position: | 59-215 |
Cow position: | chr1:30518443-30518595 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 122 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 61-300 |
Cow position: | chr1:57757518-57757744 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 182 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 191, 51 |
Conread position: | 66-337 |
Cow position: | chr1:62041712-62041967 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 193 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 187, 63 |
Conread position: | 66-342 |
Cow position: | chr1:63134259-63134517 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 199 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 188, 28 |
Conread position: | 71-299 |
Cow position: | chr1:22071982-22072204 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 176 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 179, 99 |
Conread position: | 72-335 |
Cow position: | chr1:64745415-64745154 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 198 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 13, 71 |
Conread position: | 74-373 |
Cow position: | chr1:101967019-101966724 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 213 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 171, 55 |
Conread position: | 82-338 |
Cow position: | chr1:23510442-23510195 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 197 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 56, 50 |
Conread position: | 96-340 |
Cow position: | chr1:6866053-6865809 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 177 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 161, 83 |
Conread position: | 97-339 |
Cow position: | chr1:39251337-39251589 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 182 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 109-338 |
Cow position: | chr1:69290514-69290737 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 170 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 6, 24 |
Conread position: | 113-334 |
Cow position: | chr1:3746479-3746696 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 169 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 139, 18 |
Conread position: | 113-334 |
Cow position: | chr1:31951734-31951952 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 165 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 133, 24 |
Conread position: | 116-334 |
Cow position: | chr1:100388080-100387864 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 156 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 31, 65 |
Conread position: | 118-298 |
Cow position: | chr1:68332816-68332638 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 138 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 134, 12 |
Conread position: | 128-333 |
Cow position: | chr1:59910968-59911175 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 152 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 128, 54 |
Conread position: | 129-333 |
Cow position: | chr1:80329564-80329362 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 157 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 126, 160 |
Conread position: | 134-317 |
Cow position: | chr1:54365221-54365037 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 140 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 115, 47 |
Conread position: | 138-337 |
Cow position: | chr1:11878785-11878585 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 155 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 116, 41 |
Conread position: | 173-350 |
Cow position: | chr1:72131253-72131420 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 132 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 171, 9 |
Conread position: | 187-334 |
Cow position: | chr1:78885414-78885265 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 27, 46 |
Conread position: | 206-337 |
Cow position: | chr1:53568099-53568234 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 109 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.