Cow genome map
| Conread name: | Thy1-THY010006F03 |
| Conread position: | 15-294 |
| Cow position: | chr10:54343048-54342770 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 59, 43 |
| Conread position: | 32-166 |
| Cow position: | chr10:17923288-17923427 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 32-211 |
| Cow position: | chr10:27223038-27223218 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 23, 150 |
| Conread position: | 32-256 |
| Cow position: | chr10:68979810-68980016 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 32-324 |
| Cow position: | chr10:28508965-28508673 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 144, 27 |
| Conread position: | 32-334 |
| Cow position: | chr10:767516-767220 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 116 |
| Conread position: | 32-334 |
| Cow position: | chr10:12199278-12199590 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 32-334 |
| Cow position: | chr10:23879890-23879587 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 32-334 |
| Cow position: | chr10:43060826-43060524 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 146 |
| Conread position: | 32-336 |
| Cow position: | chr10:35181960-35182262 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 100 |
| Conread position: | 32-337 |
| Cow position: | chr10:37428409-37428111 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 59 |
| Conread position: | 32-339 |
| Cow position: | chr10:19128533-19128216 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 32-340 |
| Cow position: | chr10:11275934-11276243 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 153 |
| Conread position: | 32-343 |
| Cow position: | chr10:15618168-15617869 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 33-145 |
| Cow position: | chr10:62629288-62629404 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 21, 39 |
| Conread position: | 33-163 |
| Cow position: | chr10:25257888-25258018 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 33-203 |
| Cow position: | chr10:38472482-38472649 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 154, 50 |
| Conread position: | 33-334 |
| Cow position: | chr10:47583964-47584257 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 100 |
| Conread position: | 34-334 |
| Cow position: | chr10:17745390-17745677 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 37-341 |
| Cow position: | chr10:21563267-21563582 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 130, 32 |
| Conread position: | 49-255 |
| Cow position: | chr10:48193403-48193207 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 53-255 |
| Cow position: | chr10:37092794-37092596 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 160 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 150, 12 |
| Conread position: | 53-277 |
| Cow position: | chr10:15824233-15824014 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 196, 30 |
| Conread position: | 53-334 |
| Cow position: | chr10:24609074-24609359 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 80 |
| Conread position: | 53-334 |
| Cow position: | chr10:52131862-52132136 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 30 |
| Conread position: | 53-337 |
| Cow position: | chr10:16669052-16668768 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 124 |
| Conread position: | 54-334 |
| Cow position: | chr10:41638084-41638364 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 20, 26 |
| Conread position: | 54-358 |
| Cow position: | chr10:22455484-22455780 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 127 |
| Conread position: | 55-334 |
| Cow position: | chr10:68203793-68203518 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 77 |
| Conread position: | 55-337 |
| Cow position: | chr10:2711442-2711163 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 138, 74 |
| Conread position: | 57-324 |
| Cow position: | chr10:18863171-18863431 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 107, 33 |
| Conread position: | 59-333 |
| Cow position: | chr10:17415593-17415331 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 13, 149 |
| Conread position: | 63-334 |
| Cow position: | chr10:3318183-3318452 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 29 |
| Conread position: | 65-334 |
| Cow position: | chr10:37665283-37665016 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 103 |
| Conread position: | 65-335 |
| Cow position: | chr10:5422076-5421804 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 82 |
| Conread position: | 66-337 |
| Cow position: | chr10:67051199-67051462 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 85, 17 |
| Conread position: | 71-334 |
| Cow position: | chr10:57404360-57404115 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 257, 33 |
| Conread position: | 73-327 |
| Cow position: | chr10:63621558-63621308 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 48, 61 |
| Conread position: | 78-337 |
| Cow position: | chr10:21477293-21477549 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 148, 83 |
| Conread position: | 93-321 |
| Cow position: | chr10:31220496-31220722 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 155, 37 |
| Conread position: | 99-321 |
| Cow position: | chr10:60243958-60244174 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 153, 31 |
| Conread position: | 110-337 |
| Cow position: | chr10:48208302-48208084 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 141, 60 |
| Conread position: | 131-337 |
| Cow position: | chr10:62629704-62629904 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 124, 28 |
| Conread position: | 136-340 |
| Cow position: | chr10:25536403-25536614 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 174-334 |
| Cow position: | chr10:55874153-55874314 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 78, 57 |
| Conread position: | 206-337 |
| Cow position: | chr10:46010274-46010139 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.