Cow genome map


           Conread name:
           Thy1-THY010006F03
        

               Conread position:
               6-299
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               25, 105
               

               Conread position:
               22-230
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               36, 61
               

               Conread position:
               23-277
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               24-337
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               34, 67
               

               Conread position:
               29-295
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 109
               

               Conread position:
               31-334
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               28, 110
               

               Conread position:
               31-339
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               27, 64
               

               Conread position:
               32-261
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               21, 119
               

               Conread position:
               32-272
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               32-290
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               26, 63
               

               Conread position:
               32-294
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               26, 137
               

               Conread position:
               32-309
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               26, 74
               

               Conread position:
               32-323
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 65
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               26, 105
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               231
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               26, 97
               

               Conread position:
               32-337
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               26, 105
               

               Conread position:
               32-337
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               24, 94
               

               Conread position:
               32-339
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               82, 142
               

               Conread position:
               32-339
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 137
               

               Conread position:
               32-339
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 26
               

               Conread position:
               32-342
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 150
               

               Conread position:
               33-230
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               25, 5
               

               Conread position:
               33-374
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               26, 110
               

               Conread position:
               34-292
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 47
               

               Conread position:
               34-316
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               26, 128
               

               Conread position:
               34-319
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 149
               

               Conread position:
               34-327
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               24, 55
               

               Conread position:
               41-299
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               17, 138
               

               Conread position:
               48-148
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               48-148
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               49-337
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 58
               

               Conread position:
               53-166
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               53-175
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 80
               

               Conread position:
               53-255
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               53-299
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               80, 70
               

               Conread position:
               53-323
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               7, 56
               

               Conread position:
               53-333
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 78
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 97
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               216, 90
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               26, 79
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               105, 30
               

               Conread position:
               53-340
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 18
               

               Conread position:
               54-334
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 126
               

               Conread position:
               54-336
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               194, 96
               

               Conread position:
               55-300
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               151, 113
               

               Conread position:
               55-334
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 124
               

               Conread position:
               55-334
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 111
               

               Conread position:
               56-231
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               57-337
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 87
               

               Conread position:
               66-338
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               99, 63
               

               Conread position:
               66-348
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 64
               

               Conread position:
               71-340
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               78-231
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               79-255
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               87-334
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               179, 60
               

               Conread position:
               95-337
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               158, 14
               

               Conread position:
               98-337
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               159, 21
               

               Conread position:
               100-337
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 193
               

               Conread position:
               121-333
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               148, 59
               

               Conread position:
               134-362
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               118, 206
               

               Conread position:
               155-339
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               100, 27
               

               Conread position:
               174-334
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 59
               

               Conread position:
               175-334
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               78, 105
               

               Conread position:
               175-342
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               77, 154
               

               Conread position:
               194-342
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               217-334
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               40, 0
               
Show alignments to all cow chromosomes.