Cow genome map


           Conread name:
           Thy1-THY010006F03
        

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               26, 54
               

               Conread position:
               18-344
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 84
               

               Conread position:
               25-223
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               27-281
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               33, 83
               

               Conread position:
               29-197
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               30, 156
               

               Conread position:
               31-218
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               31-309
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               31-336
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               31-339
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 32
               

               Conread position:
               31-343
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               31-350
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               32-148
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               32-164
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               24, 64
               

               Conread position:
               32-215
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               21, 84
               

               Conread position:
               32-265
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 39
               

               Conread position:
               32-277
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 65
               

               Conread position:
               32-317
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               112, 49
               

               Conread position:
               32-320
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               185, 77
               

               Conread position:
               32-339
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 12
               

               Conread position:
               32-350
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 153
               

               Conread position:
               32-353
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               243
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               24, 125
               

               Conread position:
               33-238
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               33-339
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               82, 26
               

               Conread position:
               33-339
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               227
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               25, 155
               

               Conread position:
               33-340
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 77
               

               Conread position:
               51-333
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 82
               

               Conread position:
               53-178
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               114, 37
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               237, 39
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 77
               

               Conread position:
               53-337
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 30
               

               Conread position:
               53-337
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               128, 55
               

               Conread position:
               53-338
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               203, 31
               

               Conread position:
               53-340
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               110, 18
               

               Conread position:
               54-161
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               54-252
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               54-263
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               53, 125
               

               Conread position:
               55-340
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               57-230
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               60-333
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 33
               

               Conread position:
               71-251
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               61, 77
               

               Conread position:
               71-334
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               159, 62
               

               Conread position:
               73-332
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               93, 57
               

               Conread position:
               73-333
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 57
               

               Conread position:
               90-337
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               163, 40
               

               Conread position:
               98-337
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               159, 39
               

               Conread position:
               105-330
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               143, 25
               

               Conread position:
               121-339
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               131, 43
               

               Conread position:
               127-334
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               126, 37
               

               Conread position:
               132-334
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 52
               

               Conread position:
               146-348
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               107, 36
               

               Conread position:
               175-337
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               77, 0
               
Show alignments to all cow chromosomes.