Cow genome map


           Conread name:
           Thy1-THY010006F03
        

               Conread position:
               1-345
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 118
               

               Conread position:
               20-305
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               20, 40
               

               Conread position:
               23-339
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 57
               

               Conread position:
               31-244
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               20, 160
               

               Conread position:
               31-251
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               26, 7
               

               Conread position:
               31-308
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               31-334
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               32-148
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               32-166
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               32-209
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               26, 103
               

               Conread position:
               32-232
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               32-299
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 105
               

               Conread position:
               32-303
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               26, 93
               

               Conread position:
               32-309
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               32-327
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               26, 102
               

               Conread position:
               32-327
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               135, 97
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 86
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 54
               

               Conread position:
               32-337
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               26, 144
               

               Conread position:
               32-337
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 30
               

               Conread position:
               32-340
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               195, 97
               

               Conread position:
               32-344
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               26, 105
               

               Conread position:
               33-290
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               133, 21
               

               Conread position:
               33-334
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               139, 28
               

               Conread position:
               33-337
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 140
               

               Conread position:
               34-158
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               34-334
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               34-342
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 103
               

               Conread position:
               41-331
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               53-278
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 126
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 108
               

               Conread position:
               53-340
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               200, 45
               

               Conread position:
               53-354
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               53-375
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               260, 126
               

               Conread position:
               54-335
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               168, 104
               

               Conread position:
               55-232
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               18, 127
               

               Conread position:
               55-320
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               23, 44
               

               Conread position:
               55-334
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               197, 37
               

               Conread position:
               57-333
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               61-334
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 38
               

               Conread position:
               64-333
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 106
               

               Conread position:
               66-336
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 102
               

               Conread position:
               70-255
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               77, 31
               

               Conread position:
               73-337
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               93, 24
               

               Conread position:
               78-334
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               78-334
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               179, 19
               

               Conread position:
               80-334
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               102, 34
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               192
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               85, 46
               

               Conread position:
               85-334
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               165, 109
               

               Conread position:
               87-231
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               87-286
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               166, 93
               

               Conread position:
               87-334
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               176, 35
               

               Conread position:
               90-330
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               97, 9
               

               Conread position:
               91-331
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               154, 56
               

               Conread position:
               133-333
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               35, 75
               

               Conread position:
               133-336
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               124, 35
               

               Conread position:
               145-337
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               109, 38
               

               Conread position:
               173-334
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               90, 9
               

               Conread position:
               176-337
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               77, 11
               

               Conread position:
               187-334
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               193-334
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 0
               
Show alignments to all cow chromosomes.