Cow genome map


           Conread name:
           Thy1-THY010006F03
        

               Conread position:
               22-337
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 28
               

               Conread position:
               24-203
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               142, 21
               

               Conread position:
               27-296
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               30-343
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 111
               

               Conread position:
               32-221
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 65
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               26, 60
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 153
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 91
               

               Conread position:
               32-338
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               26, 136
               

               Conread position:
               32-340
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 152
               

               Conread position:
               32-343
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               23, 64
               

               Conread position:
               32-360
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 141
               

               Conread position:
               32-361
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 141
               

               Conread position:
               33-147
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               25, 115
               

               Conread position:
               33-254
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               25, 33
               

               Conread position:
               33-333
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 155
               

               Conread position:
               33-334
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               227
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               25, 101
               

               Conread position:
               34-226
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               9, 133
               

               Conread position:
               38-344
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               20, 55
               

               Conread position:
               53-305
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               192, 41
               

               Conread position:
               53-323
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               126, 20
               

               Conread position:
               53-326
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 79
               

               Conread position:
               53-327
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               199, 77
               

               Conread position:
               53-327
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               196, 80
               

               Conread position:
               53-333
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               113, 48
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               137, 77
               

               Conread position:
               53-336
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 117
               

               Conread position:
               53-337
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 113
               

               Conread position:
               53-340
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 149
               

               Conread position:
               53-342
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               183, 42
               

               Conread position:
               55-178
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               108, 77
               

               Conread position:
               57-173
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               58-321
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               194, 89
               

               Conread position:
               63-321
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 68
               

               Conread position:
               71-332
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               79, 7
               

               Conread position:
               71-334
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               182, 61
               

               Conread position:
               78-339
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               20, 30
               

               Conread position:
               84-334
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               154, 96
               

               Conread position:
               85-341
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               117, 242
               

               Conread position:
               91-334
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               15, 40
               

               Conread position:
               93-327
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               159, 54
               

               Conread position:
               100-334
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               102-337
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               155, 28
               

               Conread position:
               107-339
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               107-347
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               146, 55
               

               Conread position:
               110-222
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               110-337
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               86, 34
               

               Conread position:
               111-255
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               132-327
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 110
               

               Conread position:
               191-337
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               194-339
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               25, 147
               

               Conread position:
               220-353
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 119
               
Show alignments to all cow chromosomes.