Cow genome map


           Conread name:
           Thy1-THY010006F03
        

               Conread position:
               31-355
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               28, 7
               

               Conread position:
               32-122
               

               Cow position:
               
               

               Alignm length:
               91
               

               Alignm identity:
               77
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               32-166
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 118
               

               Conread position:
               32-218
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 84
               

               Conread position:
               32-332
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               26, 137
               

               Conread position:
               32-333
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 181
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 56
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 153
               

               Conread position:
               32-340
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               21, 125
               

               Conread position:
               32-343
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 7
               

               Conread position:
               32-346
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 143
               

               Conread position:
               32-346
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 105
               

               Conread position:
               33-162
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               34-344
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 98
               

               Conread position:
               35-354
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               42-339
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 129
               

               Conread position:
               49-323
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               207
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               9, 84
               

               Conread position:
               53-196
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               7, 99
               

               Conread position:
               53-332
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               111, 128
               

               Conread position:
               53-338
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 54
               

               Conread position:
               54-226
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               111, 76
               

               Conread position:
               55-151
               

               Cow position:
               
               

               Alignm length:
               97
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               56-166
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               56-184
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               59-221
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               59-371
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               57, 126
               

               Conread position:
               61-337
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               107, 23
               

               Conread position:
               65-179
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               77-334
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 89
               

               Conread position:
               91-332
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               56, 78
               

               Conread position:
               105-269
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               150, 94
               

               Conread position:
               106-337
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               147, 24
               

               Conread position:
               109-295
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               144, 74
               

               Conread position:
               110-333
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 16
               

               Conread position:
               120-330
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               43, 65
               

               Conread position:
               121-337
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               124, 59
               

               Conread position:
               130-333
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               132-326
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               121, 50
               

               Conread position:
               187-337
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 118
               

               Conread position:
               203-334
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               203-337
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               99, 0
               
Show alignments to all cow chromosomes.