Cow genome map
| Conread name: | Thy1-THY010006F03 |
| Conread position: | 31-355 |
| Cow position: | chr18:24664181-24663862 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 28, 7 |
| Conread position: | 32-122 |
| Cow position: | chr18:14480697-14480787 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 77 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 32-166 |
| Cow position: | chr18:14804435-14804301 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 118 |
| Conread position: | 32-218 |
| Cow position: | chr18:26667400-26667598 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 84 |
| Conread position: | 32-332 |
| Cow position: | chr18:23316516-23316232 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 26, 137 |
| Conread position: | 32-333 |
| Cow position: | chr18:22433526-22433224 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 181 |
| Conread position: | 32-334 |
| Cow position: | chr18:32860910-32861214 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 56 |
| Conread position: | 32-334 |
| Cow position: | chr18:39475015-39474703 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 32-334 |
| Cow position: | chr18:53047797-53047494 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 153 |
| Conread position: | 32-340 |
| Cow position: | chr18:22065106-22064810 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 21, 125 |
| Conread position: | 32-343 |
| Cow position: | chr18:28085835-28086150 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 32-346 |
| Cow position: | chr18:16259521-16259841 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 143 |
| Conread position: | 32-346 |
| Cow position: | chr18:50880741-50881064 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 105 |
| Conread position: | 33-162 |
| Cow position: | chr18:16539173-16539307 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 34-344 |
| Cow position: | chr18:1700850-1701157 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 98 |
| Conread position: | 35-354 |
| Cow position: | chr18:53028983-53029276 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 42-339 |
| Cow position: | chr18:21123250-21122962 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 129 |
| Conread position: | 49-323 |
| Cow position: | chr18:50242338-50242610 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 53-196 |
| Cow position: | chr18:31394005-31394149 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 7, 99 |
| Conread position: | 53-332 |
| Cow position: | chr18:29081299-29081573 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 111, 128 |
| Conread position: | 53-338 |
| Cow position: | chr18:25846749-25846469 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 54 |
| Conread position: | 54-226 |
| Cow position: | chr18:33146894-33147063 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 111, 76 |
| Conread position: | 55-151 |
| Cow position: | chr18:21290486-21290390 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-166 |
| Cow position: | chr18:29043156-29043048 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 56-184 |
| Cow position: | chr18:33896128-33896254 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 59-221 |
| Cow position: | chr18:35471515-35471349 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 59-371 |
| Cow position: | chr18:26866121-26866430 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 57, 126 |
| Conread position: | 61-337 |
| Cow position: | chr18:48952564-48952830 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 107, 23 |
| Conread position: | 65-179 |
| Cow position: | chr18:21880152-21880037 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 77-334 |
| Cow position: | chr18:49436659-49436915 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 89 |
| Conread position: | 91-332 |
| Cow position: | chr18:27405212-27405446 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 56, 78 |
| Conread position: | 105-269 |
| Cow position: | chr18:8170755-8170922 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 150, 94 |
| Conread position: | 106-337 |
| Cow position: | chr18:1129238-1129460 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 147, 24 |
| Conread position: | 109-295 |
| Cow position: | chr18:5060199-5060010 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 144, 74 |
| Conread position: | 110-333 |
| Cow position: | chr18:55748931-55748711 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 120-330 |
| Cow position: | chr18:12078755-12078542 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 65 |
| Conread position: | 121-337 |
| Cow position: | chr18:52870961-52871176 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 124, 59 |
| Conread position: | 130-333 |
| Cow position: | chr18:1195833-1196033 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 132-326 |
| Cow position: | chr18:36456400-36456594 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 187-337 |
| Cow position: | chr18:32371708-32371557 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 118 |
| Conread position: | 203-334 |
| Cow position: | chr18:35471134-35470999 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 203-337 |
| Cow position: | chr18:32286652-32286788 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
Show alignments to all cow chromosomes.