Cow genome map


           Conread name:
           Thy1-THY010006F03
        

               Conread position:
               6-334
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               57, 112
               

               Conread position:
               16-337
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 36
               

               Conread position:
               18-251
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               24-333
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 110
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               224, 27
               

               Conread position:
               29-334
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 29
               

               Conread position:
               32-142
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               32-187
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               78, 22
               

               Conread position:
               32-220
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               32-254
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               64, 27
               

               Conread position:
               32-268
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               132, 23
               

               Conread position:
               32-282
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               32-294
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               26, 39
               

               Conread position:
               32-295
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               255, 29
               

               Conread position:
               32-300
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               24, 153
               

               Conread position:
               32-327
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 52
               

               Conread position:
               32-327
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               32-332
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 67
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 109
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 130
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               26, 21
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               26, 112
               

               Conread position:
               32-336
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 73
               

               Conread position:
               32-337
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               26, 81
               

               Conread position:
               32-337
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               26, 110
               

               Conread position:
               32-338
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               23, 164
               

               Conread position:
               32-339
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               26, 84
               

               Conread position:
               33-168
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 130
               

               Conread position:
               33-175
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               26, 136
               

               Conread position:
               33-295
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 5
               

               Conread position:
               33-343
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 88
               

               Conread position:
               34-333
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               227, 24
               

               Conread position:
               35-334
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               99, 23
               

               Conread position:
               37-337
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 145
               

               Conread position:
               38-176
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               41-334
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               17, 44
               

               Conread position:
               47-290
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               12, 136
               

               Conread position:
               51-334
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               10, 33
               

               Conread position:
               53-176
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               53-219
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               145, 79
               

               Conread position:
               53-329
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               53-331
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 18
               

               Conread position:
               53-333
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               177, 79
               

               Conread position:
               53-333
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 115
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               110, 45
               

               Conread position:
               53-337
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 18
               

               Conread position:
               53-339
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 115
               

               Conread position:
               53-340
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               39, 128
               

               Conread position:
               55-309
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               55-332
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               45, 69
               

               Conread position:
               55-334
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 78
               

               Conread position:
               55-389
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               199, 44
               

               Conread position:
               58-353
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 26
               

               Conread position:
               59-331
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               79, 7
               

               Conread position:
               60-343
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               193, 90
               

               Conread position:
               63-270
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               102, 87
               

               Conread position:
               65-333
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               188, 25
               

               Conread position:
               68-337
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               184, 19
               

               Conread position:
               71-288
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               71-322
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               96, 59
               

               Conread position:
               75-309
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               174, 55
               

               Conread position:
               78-337
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               171, 88
               

               Conread position:
               84-316
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               86-333
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               167, 56
               

               Conread position:
               110-333
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 60
               

               Conread position:
               132-334
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               101, 59
               

               Conread position:
               135-338
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               84, 33
               

               Conread position:
               138-299
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 44
               

               Conread position:
               150-333
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 32
               

               Conread position:
               168-337
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               191-334
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               55, 115
               
Show alignments to all cow chromosomes.