Cow genome map
| Conread name: | Thy1-THY010006F03 |
| Conread position: | 31-333 |
| Cow position: | chr20:21415326-21415025 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 32-166 |
| Cow position: | chr20:27977367-27977231 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 32-175 |
| Cow position: | chr20:25293946-25294091 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 135 |
| Conread position: | 32-217 |
| Cow position: | chr20:36707124-36706937 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 27, 59 |
| Conread position: | 32-333 |
| Cow position: | chr20:15147647-15147354 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 26, 59 |
| Conread position: | 32-334 |
| Cow position: | chr20:13588819-13588512 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 156 |
| Conread position: | 32-334 |
| Cow position: | chr20:31563632-31563338 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 216 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 32-337 |
| Cow position: | chr20:21847564-21847261 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 75 |
| Conread position: | 32-338 |
| Cow position: | chr20:20350450-20350149 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 26, 60 |
| Conread position: | 32-338 |
| Cow position: | chr20:33154640-33154334 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 32-340 |
| Cow position: | chr20:5668449-5668129 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 158 |
| Conread position: | 32-345 |
| Cow position: | chr20:14864522-14864214 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 51 |
| Conread position: | 33-265 |
| Cow position: | chr20:24280309-24280528 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 33-308 |
| Cow position: | chr20:13790333-13790612 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 25, 114 |
| Conread position: | 35-261 |
| Cow position: | chr20:27844358-27844594 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 23, 138 |
| Conread position: | 35-333 |
| Cow position: | chr20:22420458-22420161 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 47-314 |
| Cow position: | chr20:31098063-31098329 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 53-322 |
| Cow position: | chr20:3376944-3376676 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 20 |
| Conread position: | 53-333 |
| Cow position: | chr20:30285729-30286003 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 112, 77 |
| Conread position: | 53-339 |
| Cow position: | chr20:21002174-21001904 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 196, 79 |
| Conread position: | 54-177 |
| Cow position: | chr20:28617740-28617617 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 54-265 |
| Cow position: | chr20:35249226-35249018 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 78, 118 |
| Conread position: | 55-334 |
| Cow position: | chr20:23421995-23421722 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 125 |
| Conread position: | 59-344 |
| Cow position: | chr20:887285-887577 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 62, 117 |
| Conread position: | 64-334 |
| Cow position: | chr20:21403547-21403814 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 137, 56 |
| Conread position: | 71-294 |
| Cow position: | chr20:7284238-7284456 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 22, 60 |
| Conread position: | 75-253 |
| Cow position: | chr20:9918860-9919030 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 78-332 |
| Cow position: | chr20:22919766-22919520 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 6, 101 |
| Conread position: | 81-334 |
| Cow position: | chr20:36988203-36987952 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 54 |
| Conread position: | 81-350 |
| Cow position: | chr20:23400675-23400931 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 84-337 |
| Cow position: | chr20:7801733-7801490 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 173, 31 |
| Conread position: | 87-329 |
| Cow position: | chr20:2858742-2858975 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 165, 92 |
| Conread position: | 93-310 |
| Cow position: | chr20:20072147-20071926 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 160, 98 |
| Conread position: | 105-333 |
| Cow position: | chr20:20064240-20064012 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 148, 81 |
| Conread position: | 122-333 |
| Cow position: | chr20:21301036-21300828 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 135, 57 |
| Conread position: | 132-328 |
| Cow position: | chr20:17473152-17472957 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 132-344 |
| Cow position: | chr20:16582844-16582636 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 131, 36 |
| Conread position: | 134-334 |
| Cow position: | chr20:36373826-36373622 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 33, 59 |
Show alignments to all cow chromosomes.