Cow genome map
| Conread name: | Thy1-THY010006F03 |
| Conread position: | 23-340 |
| Cow position: | chr23:30691729-30691423 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 229, 26 |
| Conread position: | 27-342 |
| Cow position: | chr23:9654539-9654230 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 29-334 |
| Cow position: | chr23:32549432-32549142 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 31-210 |
| Cow position: | chr23:1250804-1250636 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 31-226 |
| Cow position: | chr23:30302109-30301919 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 32-337 |
| Cow position: | chr23:5258639-5258934 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 52 |
| Conread position: | 32-337 |
| Cow position: | chr23:16171007-16171322 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 157 |
| Conread position: | 32-340 |
| Cow position: | chr23:24400894-24400576 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 117 |
| Conread position: | 32-345 |
| Cow position: | chr23:2784087-2783768 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 26, 31 |
| Conread position: | 33-177 |
| Cow position: | chr23:6964048-6963911 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 39-166 |
| Cow position: | chr23:8101515-8101643 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 41-332 |
| Cow position: | chr23:39069915-39069621 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 16, 109 |
| Conread position: | 53-166 |
| Cow position: | chr23:38026362-38026253 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 53-329 |
| Cow position: | chr23:9546711-9546975 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 68 |
| Conread position: | 53-333 |
| Cow position: | chr23:23917195-23917474 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 23 |
| Conread position: | 53-334 |
| Cow position: | chr23:15147681-15147409 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 199, 117 |
| Conread position: | 53-334 |
| Cow position: | chr23:39822786-39823063 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 69 |
| Conread position: | 53-340 |
| Cow position: | chr23:25409144-25409421 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 125 |
| Conread position: | 55-332 |
| Cow position: | chr23:36674444-36674181 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 221, 24 |
| Conread position: | 56-338 |
| Cow position: | chr23:14572733-14573008 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 189, 59 |
| Conread position: | 57-344 |
| Cow position: | chr23:16479581-16479292 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 108, 69 |
| Conread position: | 59-185 |
| Cow position: | chr23:206187-206313 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 67-337 |
| Cow position: | chr23:36484088-36483831 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 189, 76 |
| Conread position: | 71-337 |
| Cow position: | chr23:7571324-7571066 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 184, 50 |
| Conread position: | 73-327 |
| Cow position: | chr23:35654714-35654462 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 93, 56 |
| Conread position: | 73-331 |
| Cow position: | chr23:34514547-34514293 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 150, 165 |
| Conread position: | 84-330 |
| Cow position: | chr23:32845666-32845426 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 167, 97 |
| Conread position: | 92-326 |
| Cow position: | chr23:2330414-2330192 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 94-249 |
| Cow position: | chr23:32869427-32869278 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 94-331 |
| Cow position: | chr23:1682433-1682664 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 159, 36 |
| Conread position: | 101-271 |
| Cow position: | chr23:15694244-15694071 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 107-338 |
| Cow position: | chr23:20023841-20024070 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 110-335 |
| Cow position: | chr23:9425831-9425607 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 143, 52 |
| Conread position: | 112-334 |
| Cow position: | chr23:30127366-30127151 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 115-334 |
| Cow position: | chr23:37036471-37036265 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 142, 47 |
| Conread position: | 146-339 |
| Cow position: | chr23:25078797-25078605 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 36 |
| Conread position: | 173-339 |
| Cow position: | chr23:6963739-6963577 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 183-340 |
| Cow position: | chr23:9724003-9723846 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 278-475 |
| Cow position: | chr23:7253982-7254177 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 159, 7 |
Show alignments to all cow chromosomes.