Cow genome map


           Conread name:
           Thy1-THY010006F03
        

               Conread position:
               23-340
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               229, 26
               

               Conread position:
               27-342
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               31, 39
               

               Conread position:
               29-334
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 57
               

               Conread position:
               31-210
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               31-226
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               32-337
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 52
               

               Conread position:
               32-337
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 157
               

               Conread position:
               32-340
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 117
               

               Conread position:
               32-345
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               26, 31
               

               Conread position:
               33-177
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               39-166
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               41-332
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               16, 109
               

               Conread position:
               53-166
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               53-329
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 68
               

               Conread position:
               53-333
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 23
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               199, 117
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 69
               

               Conread position:
               53-340
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 125
               

               Conread position:
               55-332
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               221, 24
               

               Conread position:
               56-338
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               189, 59
               

               Conread position:
               57-344
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               108, 69
               

               Conread position:
               59-185
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               67-337
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               189, 76
               

               Conread position:
               71-337
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               184, 50
               

               Conread position:
               73-327
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               93, 56
               

               Conread position:
               73-331
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               150, 165
               

               Conread position:
               84-330
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               167, 97
               

               Conread position:
               92-326
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               94-249
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               94-331
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               159, 36
               

               Conread position:
               101-271
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               107-338
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               72, 37
               

               Conread position:
               110-335
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               143, 52
               

               Conread position:
               112-334
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               115-334
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               142, 47
               

               Conread position:
               146-339
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 36
               

               Conread position:
               173-339
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               183-340
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               278-475
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               159, 7
               
Show alignments to all cow chromosomes.