Cow genome map
| Conread name: | Thy1-THY010006F03 |
| Conread position: | 31-334 |
| Cow position: | chr25:8618126-8617827 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 70 |
| Conread position: | 32-166 |
| Cow position: | chr25:8358368-8358498 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 32-251 |
| Cow position: | chr25:23559604-23559385 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 94 |
| Conread position: | 32-251 |
| Cow position: | chr25:36235528-36235317 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 27, 146 |
| Conread position: | 32-255 |
| Cow position: | chr25:16193240-16193021 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 26, 82 |
| Conread position: | 32-302 |
| Cow position: | chr25:5567462-5567178 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 26, 86 |
| Conread position: | 32-309 |
| Cow position: | chr25:18206013-18205747 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 26, 98 |
| Conread position: | 32-322 |
| Cow position: | chr25:16940567-16940272 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 32-333 |
| Cow position: | chr25:19686462-19686157 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 32-333 |
| Cow position: | chr25:20180762-20181060 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 26, 139 |
| Conread position: | 32-334 |
| Cow position: | chr25:23014450-23014742 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 32-348 |
| Cow position: | chr25:5377350-5377040 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 105 |
| Conread position: | 33-176 |
| Cow position: | chr25:6680491-6680351 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 33-337 |
| Cow position: | chr25:13123509-13123812 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 19, 154 |
| Conread position: | 34-333 |
| Cow position: | chr25:33345943-33346221 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 53-255 |
| Cow position: | chr25:30036065-30036263 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 160 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 53-334 |
| Cow position: | chr25:16240300-16240027 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 200, 32 |
| Conread position: | 53-334 |
| Cow position: | chr25:17472978-17473252 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 116 |
| Conread position: | 53-337 |
| Cow position: | chr25:13704327-13704610 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 73 |
| Conread position: | 53-337 |
| Cow position: | chr25:14279762-14280032 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 216 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 197, 14 |
| Conread position: | 65-327 |
| Cow position: | chr25:34159610-34159354 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 102, 55 |
| Conread position: | 65-337 |
| Cow position: | chr25:40833106-40832835 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 71-337 |
| Cow position: | chr25:10010218-10009964 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 174, 59 |
| Conread position: | 81-255 |
| Cow position: | chr25:35038088-35037923 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 81-322 |
| Cow position: | chr25:20497139-20497367 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 169, 17 |
| Conread position: | 94-265 |
| Cow position: | chr25:16429411-16429242 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 97, 36 |
| Conread position: | 101-333 |
| Cow position: | chr25:13216140-13216365 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 102-334 |
| Cow position: | chr25:8447823-8448046 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 147, 8 |
| Conread position: | 108-308 |
| Cow position: | chr25:13486697-13486895 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 142, 21 |
| Conread position: | 110-329 |
| Cow position: | chr25:20624173-20624392 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 55, 72 |
| Conread position: | 115-334 |
| Cow position: | chr25:16687734-16687516 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 137, 64 |
| Conread position: | 121-325 |
| Cow position: | chr25:9785668-9785461 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 129-334 |
| Cow position: | chr25:15564577-15564777 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 124, 39 |
| Conread position: | 134-305 |
| Cow position: | chr25:28008006-28007833 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.