Cow genome map
| Conread name: | Thy1-THY010006F03 |
| Conread position: | 10-119 |
| Cow position: | chr27:5531064-5531178 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 11-342 |
| Cow position: | chr27:31238305-31238633 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 47, 115 |
| Conread position: | 21-158 |
| Cow position: | chr27:29004806-29004935 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 28-332 |
| Cow position: | chr27:15211425-15211110 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 30-334 |
| Cow position: | chr27:18546596-18546287 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 217 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 31-332 |
| Cow position: | chr27:9261483-9261178 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 31-339 |
| Cow position: | chr27:4449662-4449955 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 32-272 |
| Cow position: | chr27:11935364-11935112 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 26, 80 |
| Conread position: | 32-334 |
| Cow position: | chr27:18057167-18056862 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 139 |
| Conread position: | 32-334 |
| Cow position: | chr27:26091746-26092052 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 27, 44 |
| Conread position: | 32-338 |
| Cow position: | chr27:13860932-13861215 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 23, 92 |
| Conread position: | 32-339 |
| Cow position: | chr27:11021420-11021123 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 97 |
| Conread position: | 32-342 |
| Cow position: | chr27:23073953-23073633 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 27, 118 |
| Conread position: | 33-227 |
| Cow position: | chr27:6534397-6534587 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 36-214 |
| Cow position: | chr27:280955-281139 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 20, 123 |
| Conread position: | 47-334 |
| Cow position: | chr27:17564679-17564390 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 135 |
| Conread position: | 52-343 |
| Cow position: | chr27:3935061-3935359 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 112 |
| Conread position: | 53-164 |
| Cow position: | chr27:11755838-11755945 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 53-331 |
| Cow position: | chr27:29611187-29610928 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 253, 66 |
| Conread position: | 53-338 |
| Cow position: | chr27:30889254-30889533 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 216, 58 |
| Conread position: | 53-340 |
| Cow position: | chr27:2246628-2246356 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 200, 90 |
| Conread position: | 53-341 |
| Cow position: | chr27:18589379-18589098 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 278, 77 |
| Conread position: | 53-350 |
| Cow position: | chr27:11956039-11956347 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 44, 104 |
| Conread position: | 63-334 |
| Cow position: | chr27:7860135-7860405 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 20 |
| Conread position: | 93-329 |
| Cow position: | chr27:31376198-31375969 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 93-340 |
| Cow position: | chr27:12547767-12548007 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 152, 85 |
| Conread position: | 95-334 |
| Cow position: | chr27:18179078-18179316 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 157, 75 |
| Conread position: | 104-338 |
| Cow position: | chr27:4921868-4922100 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 142, 27 |
| Conread position: | 108-334 |
| Cow position: | chr27:31524120-31523898 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 144, 74 |
| Conread position: | 109-334 |
| Cow position: | chr27:18573478-18573254 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 150, 21 |
| Conread position: | 143-336 |
| Cow position: | chr27:12000116-12000311 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 91, 38 |
Show alignments to all cow chromosomes.