Cow genome map
| Conread name: | Thy1-THY010006F03 |
| Conread position: | 13-341 |
| Cow position: | chr28:4803179-4802861 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 273, 52 |
| Conread position: | 20-178 |
| Cow position: | chr28:23390631-23390793 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 22-334 |
| Cow position: | chr28:22614204-22614496 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 36, 94 |
| Conread position: | 31-244 |
| Cow position: | chr28:17598727-17598507 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 32-176 |
| Cow position: | chr28:28630875-28631023 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 32-178 |
| Cow position: | chr28:17482637-17482498 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 32-229 |
| Cow position: | chr28:11379496-11379291 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 26, 86 |
| Conread position: | 32-232 |
| Cow position: | chr28:32284699-32284502 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 26, 96 |
| Conread position: | 32-327 |
| Cow position: | chr28:17762648-17762952 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 164, 61 |
| Conread position: | 32-333 |
| Cow position: | chr28:7799889-7799600 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 41 |
| Conread position: | 32-334 |
| Cow position: | chr28:5912543-5912241 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 32-337 |
| Cow position: | chr28:2340837-2341142 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 25, 125 |
| Conread position: | 32-337 |
| Cow position: | chr28:26626875-26626585 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 24, 60 |
| Conread position: | 32-337 |
| Cow position: | chr28:31994353-31994028 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 70 |
| Conread position: | 32-339 |
| Cow position: | chr28:15349763-15350059 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 26, 99 |
| Conread position: | 33-334 |
| Cow position: | chr28:34346952-34346654 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 22 |
| Conread position: | 38-314 |
| Cow position: | chr28:24468362-24468630 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 219, 45 |
| Conread position: | 52-295 |
| Cow position: | chr28:6355399-6355634 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 197, 116 |
| Conread position: | 53-202 |
| Cow position: | chr28:10987961-10987814 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 53-231 |
| Cow position: | chr28:6277193-6277023 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 53-336 |
| Cow position: | chr28:10647765-10647486 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 112, 55 |
| Conread position: | 53-336 |
| Cow position: | chr28:34117414-34117694 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 127 |
| Conread position: | 62-333 |
| Cow position: | chr28:11923772-11923499 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 121, 28 |
| Conread position: | 63-332 |
| Cow position: | chr28:3898377-3898636 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 66-167 |
| Cow position: | chr28:10611254-10611153 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-334 |
| Cow position: | chr28:20095216-20095488 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 132, 58 |
| Conread position: | 93-228 |
| Cow position: | chr28:22339760-22339886 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 97-334 |
| Cow position: | chr28:25926686-25926924 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 25, 84 |
| Conread position: | 99-334 |
| Cow position: | chr28:16251887-16251658 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 50, 33 |
| Conread position: | 108-334 |
| Cow position: | chr28:6103091-6103313 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 145, 21 |
| Conread position: | 134-363 |
| Cow position: | chr28:22361031-22361257 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 120, 45 |
| Conread position: | 176-352 |
| Cow position: | chr28:11379264-11379087 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 93, 171 |
| Conread position: | 191-342 |
| Cow position: | chr28:16241245-16241089 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 7, 151 |
| Conread position: | 206-334 |
| Cow position: | chr28:22831053-22831185 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 208-367 |
| Cow position: | chr28:11284060-11283895 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
Show alignments to all cow chromosomes.