Cow genome map
| Conread name: | Thy1-THY010006F03 |
| Conread position: | 6-255 |
| Cow position: | chr29:24443058-24442806 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 211 |
| Conread position: | 17-333 |
| Cow position: | chr29:2481065-2480755 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 41, 49 |
| Conread position: | 32-154 |
| Cow position: | chr29:37208059-37208185 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 66 |
| Conread position: | 32-175 |
| Cow position: | chr29:7959527-7959379 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 32-248 |
| Cow position: | chr29:22454532-22454324 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 26, 102 |
| Conread position: | 32-249 |
| Cow position: | chr29:2848125-2847910 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 21 |
| Conread position: | 32-327 |
| Cow position: | chr29:30921107-30920790 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 32-331 |
| Cow position: | chr29:21198345-21198034 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 26, 102 |
| Conread position: | 32-334 |
| Cow position: | chr29:8890961-8890665 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 32-334 |
| Cow position: | chr29:18338240-18337954 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 99 |
| Conread position: | 32-337 |
| Cow position: | chr29:3346264-3346557 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 26, 59 |
| Conread position: | 32-337 |
| Cow position: | chr29:16359921-16360218 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 21, 151 |
| Conread position: | 32-339 |
| Cow position: | chr29:794888-795199 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 229 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 26, 105 |
| Conread position: | 33-340 |
| Cow position: | chr29:7738394-7738092 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 5 |
| Conread position: | 42-337 |
| Cow position: | chr29:23988797-23989096 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 16, 131 |
| Conread position: | 53-166 |
| Cow position: | chr29:17712340-17712451 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 34 |
| Conread position: | 53-208 |
| Cow position: | chr29:478440-478591 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 53-277 |
| Cow position: | chr29:4458914-4459135 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 141, 43 |
| Conread position: | 53-292 |
| Cow position: | chr29:19931654-19931886 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 199, 17 |
| Conread position: | 53-332 |
| Cow position: | chr29:8906855-8907117 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 213 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 202, 9 |
| Conread position: | 53-334 |
| Cow position: | chr29:34330919-34330630 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 97, 45 |
| Conread position: | 53-334 |
| Cow position: | chr29:35037056-35037326 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 56-334 |
| Cow position: | chr29:44028117-44028388 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 62-332 |
| Cow position: | chr29:18361351-18361097 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 87, 47 |
| Conread position: | 66-326 |
| Cow position: | chr29:22655603-22655354 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 183, 64 |
| Conread position: | 66-327 |
| Cow position: | chr29:7892632-7892371 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 40, 102 |
| Conread position: | 71-179 |
| Cow position: | chr29:13040212-13040104 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 77-334 |
| Cow position: | chr29:12193508-12193756 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 78-337 |
| Cow position: | chr29:682188-681943 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 200 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 178, 59 |
| Conread position: | 79-250 |
| Cow position: | chr29:5174331-5174498 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 23, 104 |
| Conread position: | 82-326 |
| Cow position: | chr29:28115500-28115744 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 85, 23 |
| Conread position: | 93-333 |
| Cow position: | chr29:34392158-34392401 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 39 |
| Conread position: | 102-333 |
| Cow position: | chr29:3822898-3823140 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 57 |
| Conread position: | 112-308 |
| Cow position: | chr29:8685372-8685565 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 151, 52 |
| Conread position: | 116-343 |
| Cow position: | chr29:849457-849687 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 137, 75 |
| Conread position: | 129-327 |
| Cow position: | chr29:30814075-30814269 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 68, 51 |
| Conread position: | 186-346 |
| Cow position: | chr29:40091677-40091514 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 154 |
Show alignments to all cow chromosomes.