Cow genome map


           Conread name:
           Thy1-THY010006F03
        

               Conread position:
               12-327
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 123
               

               Conread position:
               20-331
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 35
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 159
               

               Conread position:
               25-330
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               230
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               224, 58
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               33, 62
               

               Conread position:
               27-333
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 11
               

               Conread position:
               30-337
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               28, 117
               

               Conread position:
               31-321
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               31-333
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 68
               

               Conread position:
               31-334
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               32-255
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               26, 152
               

               Conread position:
               32-264
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               26, 161
               

               Conread position:
               32-295
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               26, 85
               

               Conread position:
               32-327
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 51
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               26, 71
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               27, 61
               

               Conread position:
               32-337
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               26, 105
               

               Conread position:
               32-337
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 103
               

               Conread position:
               32-338
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 19
               

               Conread position:
               33-321
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 51
               

               Conread position:
               33-327
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               220, 25
               

               Conread position:
               33-328
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               43, 30
               

               Conread position:
               34-334
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 174
               

               Conread position:
               35-338
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 68
               

               Conread position:
               36-337
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 45
               

               Conread position:
               38-283
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               35, 25
               

               Conread position:
               38-339
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               229
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               20, 50
               

               Conread position:
               38-344
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               226
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               225, 14
               

               Conread position:
               53-215
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               53-288
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               26, 51
               

               Conread position:
               53-304
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               142, 34
               

               Conread position:
               53-333
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               114, 48
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               185, 48
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               199, 46
               

               Conread position:
               53-337
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 48
               

               Conread position:
               53-337
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               53-339
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               54-273
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               54-334
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 179
               

               Conread position:
               54-340
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               133, 78
               

               Conread position:
               55-327
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               84, 121
               

               Conread position:
               55-338
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 80
               

               Conread position:
               56-327
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 38
               

               Conread position:
               57-334
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               59-289
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               81, 12
               

               Conread position:
               59-325
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               113, 62
               

               Conread position:
               60-337
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               192, 70
               

               Conread position:
               64-350
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               66-283
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               183, 113
               

               Conread position:
               66-342
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 58
               

               Conread position:
               68-179
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               72-337
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               136, 80
               

               Conread position:
               74-333
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               74-334
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               183, 58
               

               Conread position:
               75-332
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 69
               

               Conread position:
               77-334
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               100-317
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               149, 6
               

               Conread position:
               101-337
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               158, 69
               

               Conread position:
               102-336
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               148, 66
               

               Conread position:
               113-327
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               139, 24
               

               Conread position:
               114-316
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 8
               

               Conread position:
               116-270
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               97, 63
               

               Conread position:
               124-294
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               129, 39
               

               Conread position:
               134-334
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 47
               

               Conread position:
               137-334
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               154-337
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               159-339
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               166-347
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               77, 0
               
Show alignments to all cow chromosomes.