Cow genome map


           Conread name:
           Thy1-THY010006F03
        

               Conread position:
               1-337
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               57, 94
               

               Conread position:
               11-326
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               47, 108
               

               Conread position:
               11-339
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 38
               

               Conread position:
               23-337
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               32, 114
               

               Conread position:
               31-334
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               27, 149
               

               Conread position:
               31-339
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               32-177
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               32-283
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               22, 104
               

               Conread position:
               32-292
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               26, 117
               

               Conread position:
               32-322
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               26, 81
               

               Conread position:
               32-332
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 6
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               26, 67
               

               Conread position:
               32-337
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 51
               

               Conread position:
               32-339
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 150
               

               Conread position:
               32-346
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 9
               

               Conread position:
               33-195
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 144
               

               Conread position:
               33-231
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 115
               

               Conread position:
               33-300
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               25, 152
               

               Conread position:
               33-328
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               25, 111
               

               Conread position:
               33-334
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 108
               

               Conread position:
               33-334
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 101
               

               Conread position:
               33-337
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 5
               

               Conread position:
               34-201
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 162
               

               Conread position:
               34-343
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 28
               

               Conread position:
               35-230
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               45-354
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               224
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               212, 87
               

               Conread position:
               51-334
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 118
               

               Conread position:
               53-164
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               53-179
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               53-230
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               38, 76
               

               Conread position:
               53-230
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               53-230
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               53-251
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               157
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               140, 115
               

               Conread position:
               53-283
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               62, 103
               

               Conread position:
               53-323
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               53-327
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               114, 38
               

               Conread position:
               53-333
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               212
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               200, 68
               

               Conread position:
               53-333
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 115
               

               Conread position:
               53-333
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               38, 132
               

               Conread position:
               53-337
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 111
               

               Conread position:
               53-339
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 30
               

               Conread position:
               53-339
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               54-329
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               113, 22
               

               Conread position:
               57-251
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               59-340
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               30, 72
               

               Conread position:
               67-326
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               71-322
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               172, 76
               

               Conread position:
               71-343
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 105
               

               Conread position:
               75-211
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               79-330
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               88, 52
               

               Conread position:
               82-338
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               175, 11
               

               Conread position:
               84-340
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               86, 38
               

               Conread position:
               88-338
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               162, 26
               

               Conread position:
               103-323
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               148, 208
               

               Conread position:
               103-370
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               143, 10
               

               Conread position:
               108-358
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               189, 58
               

               Conread position:
               110-309
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               142, 41
               
Show alignments to all cow chromosomes.