Cow genome map


           Conread name:
           Thy1-THY010006F03
        

               Conread position:
               16-166
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               22-327
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               23-320
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               37, 157
               

               Conread position:
               24-333
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 42
               

               Conread position:
               31-244
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               24, 124
               

               Conread position:
               31-294
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               7, 43
               

               Conread position:
               31-319
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               31-337
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 21
               

               Conread position:
               31-337
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 153
               

               Conread position:
               32-145
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               32-161
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               32-189
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               32-289
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               26, 60
               

               Conread position:
               32-297
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               26, 72
               

               Conread position:
               32-317
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               26, 165
               

               Conread position:
               32-326
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               32-327
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 100
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 135
               

               Conread position:
               32-337
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 103
               

               Conread position:
               32-337
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               26, 118
               

               Conread position:
               32-338
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 104
               

               Conread position:
               32-338
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               26, 223
               

               Conread position:
               32-339
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 90
               

               Conread position:
               33-282
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               124, 21
               

               Conread position:
               33-332
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               25, 55
               

               Conread position:
               33-334
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               5, 102
               

               Conread position:
               39-334
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               34, 6
               

               Conread position:
               47-342
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               12, 243
               

               Conread position:
               53-251
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               53-298
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               49, 89
               

               Conread position:
               53-332
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               112, 73
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               202, 64
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 131
               

               Conread position:
               53-338
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 67
               

               Conread position:
               53-368
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 69
               

               Conread position:
               55-288
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               113, 72
               

               Conread position:
               55-333
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               172, 56
               

               Conread position:
               56-337
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               38, 79
               

               Conread position:
               58-300
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               68, 38
               

               Conread position:
               60-229
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               66-319
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               179, 64
               

               Conread position:
               66-334
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 98
               

               Conread position:
               68-334
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               76, 29
               

               Conread position:
               69-338
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               183, 21
               

               Conread position:
               73-321
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               143, 95
               

               Conread position:
               74-177
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               77-334
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               190, 53
               

               Conread position:
               78-337
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 52
               

               Conread position:
               84-331
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               179, 96
               

               Conread position:
               88-337
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               78, 176
               

               Conread position:
               95-334
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               158, 81
               

               Conread position:
               110-370
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               59, 152
               

               Conread position:
               111-340
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               112-220
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               139-334
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               27, 180
               

               Conread position:
               156-334
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               96, 25
               

               Conread position:
               181-337
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               183-333
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               187-337
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               191-334
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               191-335
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 0
               
Show alignments to all cow chromosomes.