Cow genome map

Conread name: Thy1-THY010006F03

Conread position: 16-166
Cow position: chr6:2088579-2088733 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 22-327
Cow position: chr6:11159674-11159368 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 17

Conread position: 23-320
Cow position: chr6:62754167-62753876 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 37, 157

Conread position: 24-333
Cow position: chr6:14279977-14280292 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 42

Conread position: 31-244
Cow position: chr6:3374096-3373878 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 124

Conread position: 31-294
Cow position: chr6:39917501-39917759 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 7, 43

Conread position: 31-319
Cow position: chr6:44377598-44377891 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 7

Conread position: 31-337
Cow position: chr6:29078067-29078364 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 21

Conread position: 31-337
Cow position: chr6:41557810-41558119 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 153

Conread position: 32-145
Cow position: chr6:6244585-6244472 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 32-161
Cow position: chr6:69274447-69274314 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 22, 0

Conread position: 32-189
Cow position: chr6:55743398-55743550 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 32-289
Cow position: chr6:41157558-41157809 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 26, 60

Conread position: 32-297
Cow position: chr6:55662060-55662332 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 72

Conread position: 32-317
Cow position: chr6:66840196-66840484 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 165

Conread position: 32-326
Cow position: chr6:66677045-66677358 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 82

Conread position: 32-327
Cow position: chr6:44389919-44389622 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 100

Conread position: 32-334
Cow position: chr6:31687860-31687559 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 135

Conread position: 32-337
Cow position: chr6:23891884-23892189 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 103

Conread position: 32-337
Cow position: chr6:32428775-32429055 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 26, 118

Conread position: 32-338
Cow position: chr6:6635476-6635778 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 104

Conread position: 32-338
Cow position: chr6:10484903-10484597 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 208
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 223

Conread position: 32-339
Cow position: chr6:1077093-1076784 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 90

Conread position: 33-282
Cow position: chr6:5500729-5500481 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 124, 21

Conread position: 33-332
Cow position: chr6:5275658-5275347 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 55

Conread position: 33-334
Cow position: chr6:45617098-45616803 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 5, 102

Conread position: 39-334
Cow position: chr6:55398148-55398430 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 6

Conread position: 47-342
Cow position: chr6:6722491-6722784 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 12, 243

Conread position: 53-251
Cow position: chr6:33311463-33311652 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 53-298
Cow position: chr6:35831900-35832151 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 89

Conread position: 53-332
Cow position: chr6:54930362-54930088 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 73

Conread position: 53-334
Cow position: chr6:20332666-20332941 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 15, 32

Conread position: 53-334
Cow position: chr6:45692305-45692034 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 202, 64

Conread position: 53-334
Cow position: chr6:53416610-53416321 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 131

Conread position: 53-338
Cow position: chr6:3017824-3018105 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 67

Conread position: 53-368
Cow position: chr6:58593778-58593474 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 69

Conread position: 55-288
Cow position: chr6:39293531-39293755 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 113, 72

Conread position: 55-333
Cow position: chr6:28087154-28086877 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 172, 56

Conread position: 56-337
Cow position: chr6:35698063-35697780 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 79

Conread position: 58-300
Cow position: chr6:37085255-37085492 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 68, 38

Conread position: 60-229
Cow position: chr6:62506716-62506882 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 66-319
Cow position: chr6:34556878-34557128 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 179, 64

Conread position: 66-334
Cow position: chr6:40241054-40241315 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 98

Conread position: 68-334
Cow position: chr6:62327913-62328172 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 76, 29

Conread position: 69-338
Cow position: chr6:14162237-14161981 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 183, 21

Conread position: 73-321
Cow position: chr6:43596172-43595924 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 143, 95

Conread position: 74-177
Cow position: chr6:15894885-15894783 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 77-334
Cow position: chr6:4666120-4665874 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 190, 53

Conread position: 78-337
Cow position: chr6:35126726-35126477 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 52

Conread position: 84-331
Cow position: chr6:24496544-24496298 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 179, 96

Conread position: 88-337
Cow position: chr6:27711019-27711268 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 78, 176

Conread position: 95-334
Cow position: chr6:50501993-50502225 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 158, 81

Conread position: 110-370
Cow position: chr6:1940086-1939819 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 59, 152

Conread position: 111-340
Cow position: chr6:3741895-3742108 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 112-220
Cow position: chr6:12808818-12808713 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 139-334
Cow position: chr6:69274115-69273909 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 27, 180

Conread position: 156-334
Cow position: chr6:24260354-24260175 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 96, 25

Conread position: 181-337
Cow position: chr6:16495135-16494974 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 183-333
Cow position: chr6:3936147-3935993 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 187-337
Cow position: chr6:6244259-6244108 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 191-334
Cow position: chr6:30287032-30287179 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 191-335
Cow position: chr6:13092588-13092440 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Show alignments to all cow chromosomes.