Cow genome map
Conread name: | Thy1-THY010006F03 |
Conread position: | 16-166 |
Cow position: | chr6:2088579-2088733 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 22-327 |
Cow position: | chr6:11159674-11159368 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 17 |
Conread position: | 23-320 |
Cow position: | chr6:62754167-62753876 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 206 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 37, 157 |
Conread position: | 24-333 |
Cow position: | chr6:14279977-14280292 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 42 |
Conread position: | 31-244 |
Cow position: | chr6:3374096-3373878 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 170 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 24, 124 |
Conread position: | 31-294 |
Cow position: | chr6:39917501-39917759 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 202 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 7, 43 |
Conread position: | 31-319 |
Cow position: | chr6:44377598-44377891 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 7 |
Conread position: | 31-337 |
Cow position: | chr6:29078067-29078364 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 21 |
Conread position: | 31-337 |
Cow position: | chr6:41557810-41558119 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 153 |
Conread position: | 32-145 |
Cow position: | chr6:6244585-6244472 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 94 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 32-161 |
Cow position: | chr6:69274447-69274314 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 101 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 32-189 |
Cow position: | chr6:55743398-55743550 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 118 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 32-289 |
Cow position: | chr6:41157558-41157809 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 187 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 26, 60 |
Conread position: | 32-297 |
Cow position: | chr6:55662060-55662332 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 203 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 26, 72 |
Conread position: | 32-317 |
Cow position: | chr6:66840196-66840484 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 203 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 26, 165 |
Conread position: | 32-326 |
Cow position: | chr6:66677045-66677358 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 217 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 27, 82 |
Conread position: | 32-327 |
Cow position: | chr6:44389919-44389622 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 100 |
Conread position: | 32-334 |
Cow position: | chr6:31687860-31687559 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 135 |
Conread position: | 32-337 |
Cow position: | chr6:23891884-23892189 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 103 |
Conread position: | 32-337 |
Cow position: | chr6:32428775-32429055 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 221 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 26, 118 |
Conread position: | 32-338 |
Cow position: | chr6:6635476-6635778 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 104 |
Conread position: | 32-338 |
Cow position: | chr6:10484903-10484597 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 208 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 26, 223 |
Conread position: | 32-339 |
Cow position: | chr6:1077093-1076784 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 90 |
Conread position: | 33-282 |
Cow position: | chr6:5500729-5500481 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 178 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 124, 21 |
Conread position: | 33-332 |
Cow position: | chr6:5275658-5275347 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 209 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 25, 55 |
Conread position: | 33-334 |
Cow position: | chr6:45617098-45616803 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 217 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 5, 102 |
Conread position: | 39-334 |
Cow position: | chr6:55398148-55398430 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 217 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 34, 6 |
Conread position: | 47-342 |
Cow position: | chr6:6722491-6722784 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 212 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 12, 243 |
Conread position: | 53-251 |
Cow position: | chr6:33311463-33311652 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 150 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 53-298 |
Cow position: | chr6:35831900-35832151 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 191 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 49, 89 |
Conread position: | 53-332 |
Cow position: | chr6:54930362-54930088 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 187 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 112, 73 |
Conread position: | 53-334 |
Cow position: | chr6:20332666-20332941 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 210 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 15, 32 |
Conread position: | 53-334 |
Cow position: | chr6:45692305-45692034 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 203 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 202, 64 |
Conread position: | 53-334 |
Cow position: | chr6:53416610-53416321 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 131 |
Conread position: | 53-338 |
Cow position: | chr6:3017824-3018105 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 67 |
Conread position: | 53-368 |
Cow position: | chr6:58593778-58593474 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 69 |
Conread position: | 55-288 |
Cow position: | chr6:39293531-39293755 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 182 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 113, 72 |
Conread position: | 55-333 |
Cow position: | chr6:28087154-28086877 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 202 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 172, 56 |
Conread position: | 56-337 |
Cow position: | chr6:35698063-35697780 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 218 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 38, 79 |
Conread position: | 58-300 |
Cow position: | chr6:37085255-37085492 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 182 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 68, 38 |
Conread position: | 60-229 |
Cow position: | chr6:62506716-62506882 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 123 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 66-319 |
Cow position: | chr6:34556878-34557128 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 188 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 179, 64 |
Conread position: | 66-334 |
Cow position: | chr6:40241054-40241315 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 98 |
Conread position: | 68-334 |
Cow position: | chr6:62327913-62328172 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 185 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 76, 29 |
Conread position: | 69-338 |
Cow position: | chr6:14162237-14161981 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 193 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 183, 21 |
Conread position: | 73-321 |
Cow position: | chr6:43596172-43595924 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 177 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 143, 95 |
Conread position: | 74-177 |
Cow position: | chr6:15894885-15894783 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 85 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 77-334 |
Cow position: | chr6:4666120-4665874 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 194 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 190, 53 |
Conread position: | 78-337 |
Cow position: | chr6:35126726-35126477 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 52 |
Conread position: | 84-331 |
Cow position: | chr6:24496544-24496298 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 177 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 179, 96 |
Conread position: | 88-337 |
Cow position: | chr6:27711019-27711268 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 177 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 78, 176 |
Conread position: | 95-334 |
Cow position: | chr6:50501993-50502225 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 184 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 158, 81 |
Conread position: | 110-370 |
Cow position: | chr6:1940086-1939819 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 189 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 59, 152 |
Conread position: | 111-340 |
Cow position: | chr6:3741895-3742108 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 165 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 112-220 |
Cow position: | chr6:12808818-12808713 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 89 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 139-334 |
Cow position: | chr6:69274115-69273909 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 152 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 27, 180 |
Conread position: | 156-334 |
Cow position: | chr6:24260354-24260175 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 136 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 96, 25 |
Conread position: | 181-337 |
Cow position: | chr6:16495135-16494974 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 118 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 183-333 |
Cow position: | chr6:3936147-3935993 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 112 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 187-337 |
Cow position: | chr6:6244259-6244108 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 191-334 |
Cow position: | chr6:30287032-30287179 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 191-335 |
Cow position: | chr6:13092588-13092440 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 111 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.