Cow genome map
| Conread name: | Thy1-THY010006F03 |
| Conread position: | 2-215 |
| Cow position: | chr7:30642316-30642524 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 7-337 |
| Cow position: | chr7:6006871-6006549 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 245, 163 |
| Conread position: | 23-334 |
| Cow position: | chr7:46216371-46216683 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 159 |
| Conread position: | 29-325 |
| Cow position: | chr7:56356739-56356448 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 87, 42 |
| Conread position: | 32-176 |
| Cow position: | chr7:33062435-33062291 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 32-273 |
| Cow position: | chr7:13823122-13823361 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 121 |
| Conread position: | 32-296 |
| Cow position: | chr7:42222089-42221825 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 17 |
| Conread position: | 32-308 |
| Cow position: | chr7:5701251-5701536 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 32-323 |
| Cow position: | chr7:59844788-59845077 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 218 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 32-327 |
| Cow position: | chr7:20104682-20104379 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 128 |
| Conread position: | 32-334 |
| Cow position: | chr7:29377814-29377519 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 25, 91 |
| Conread position: | 32-334 |
| Cow position: | chr7:52131454-52131764 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 186 |
| Conread position: | 32-334 |
| Cow position: | chr7:62516343-62516641 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 32-337 |
| Cow position: | chr7:45722063-45722355 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 32-338 |
| Cow position: | chr7:48335152-48334864 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 27, 78 |
| Conread position: | 32-339 |
| Cow position: | chr7:11592887-11592591 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 26, 68 |
| Conread position: | 32-381 |
| Cow position: | chr7:5247604-5247255 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 139 |
| Conread position: | 33-337 |
| Cow position: | chr7:62048745-62049048 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 93 |
| Conread position: | 33-337 |
| Cow position: | chr7:67499029-67499331 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 224 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 58, 106 |
| Conread position: | 33-339 |
| Cow position: | chr7:56664396-56664693 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 39-334 |
| Cow position: | chr7:49967888-49967612 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 91, 19 |
| Conread position: | 52-337 |
| Cow position: | chr7:61425928-61426212 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 116 |
| Conread position: | 53-176 |
| Cow position: | chr7:5447944-5447821 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 53-177 |
| Cow position: | chr7:5435526-5435402 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 53-177 |
| Cow position: | chr7:27709290-27709167 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 53-214 |
| Cow position: | chr7:31441995-31441835 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 53-230 |
| Cow position: | chr7:65953046-65952868 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 143 |
| Conread position: | 53-316 |
| Cow position: | chr7:45064059-45063801 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 171, 18 |
| Conread position: | 53-330 |
| Cow position: | chr7:68366894-68366610 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 55, 120 |
| Conread position: | 53-337 |
| Cow position: | chr7:20288903-20288624 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 79, 69 |
| Conread position: | 55-283 |
| Cow position: | chr7:39512241-39512029 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 55-338 |
| Cow position: | chr7:59204629-59204923 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 57-270 |
| Cow position: | chr7:63328460-63328664 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 46, 65 |
| Conread position: | 58-337 |
| Cow position: | chr7:12920291-12920011 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 217 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 63-337 |
| Cow position: | chr7:65519774-65519475 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 25, 80 |
| Conread position: | 71-333 |
| Cow position: | chr7:16738810-16739059 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 174, 93 |
| Conread position: | 74-334 |
| Cow position: | chr7:40622560-40622812 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 254, 85 |
| Conread position: | 85-304 |
| Cow position: | chr7:14435437-14435222 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 74, 26 |
| Conread position: | 94-289 |
| Cow position: | chr7:30027535-30027732 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 136, 35 |
| Conread position: | 97-333 |
| Cow position: | chr7:32589205-32589446 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 102-327 |
| Cow position: | chr7:63547372-63547166 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 150, 30 |
| Conread position: | 107-323 |
| Cow position: | chr7:54060433-54060207 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 133-334 |
| Cow position: | chr7:43004819-43005020 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 130, 46 |
| Conread position: | 136-348 |
| Cow position: | chr7:43257631-43257843 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 116, 14 |
| Conread position: | 169-335 |
| Cow position: | chr7:40643467-40643633 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 74, 13 |
| Conread position: | 170-337 |
| Cow position: | chr7:59164784-59164944 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 175-371 |
| Cow position: | chr7:8893574-8893371 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 77, 0 |
Show alignments to all cow chromosomes.