Cow genome map


           Conread name:
           Thy1-THY010006F03
        

               Conread position:
               22-334
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 75
               

               Conread position:
               23-323
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 134
               

               Conread position:
               31-309
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               31-333
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               225
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               32-243
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 69
               

               Conread position:
               32-272
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               221, 100
               

               Conread position:
               32-299
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               24, 153
               

               Conread position:
               32-299
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               32-325
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 167
               

               Conread position:
               32-332
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               10, 28
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               234
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               26, 102
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 139
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 106
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 45
               

               Conread position:
               32-336
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 9
               

               Conread position:
               32-337
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               26, 149
               

               Conread position:
               33-322
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               25, 52
               

               Conread position:
               33-335
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 63
               

               Conread position:
               50-251
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               50-318
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               42, 26
               

               Conread position:
               53-293
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               196, 44
               

               Conread position:
               53-299
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               116, 85
               

               Conread position:
               53-308
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               177, 125
               

               Conread position:
               53-327
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               198, 94
               

               Conread position:
               53-331
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               198, 77
               

               Conread position:
               53-333
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               196, 101
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 85
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               114, 184
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               49, 83
               

               Conread position:
               53-336
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 151
               

               Conread position:
               53-338
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               247, 43
               

               Conread position:
               53-344
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               58, 125
               

               Conread position:
               54-334
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               203, 49
               

               Conread position:
               55-177
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               55-334
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               111, 75
               

               Conread position:
               56-195
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               57-189
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               57-324
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               192, 109
               

               Conread position:
               57-334
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 86
               

               Conread position:
               64-327
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               233, 28
               

               Conread position:
               71-327
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               119, 72
               

               Conread position:
               71-333
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               182, 29
               

               Conread position:
               72-291
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               181, 5
               

               Conread position:
               74-334
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               183, 56
               

               Conread position:
               87-334
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               183, 85
               

               Conread position:
               87-337
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               92-333
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               115-334
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               25, 91
               

               Conread position:
               121-334
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               43, 148
               

               Conread position:
               128-339
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               133-294
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               119, 53
               

               Conread position:
               134-334
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               117, 10
               

               Conread position:
               134-335
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               120, 16
               

               Conread position:
               165-340
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 17
               

               Conread position:
               187-336
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               68, 101
               

               Conread position:
               187-355
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               148, 166
               
Show alignments to all cow chromosomes.