Cow genome map
| Conread name: | Thy1-THY010006F03 |
| Conread position: | 22-334 |
| Cow position: | chr8:6763991-6763680 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 75 |
| Conread position: | 23-323 |
| Cow position: | chr8:18883114-18883420 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 134 |
| Conread position: | 31-309 |
| Cow position: | chr8:30021624-30021348 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 31-333 |
| Cow position: | chr8:18725515-18725810 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 32-243 |
| Cow position: | chr8:18810727-18810941 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 32-272 |
| Cow position: | chr8:42151695-42151465 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 221, 100 |
| Conread position: | 32-299 |
| Cow position: | chr8:4336761-4336491 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 24, 153 |
| Conread position: | 32-299 |
| Cow position: | chr8:23440803-23440541 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 32-325 |
| Cow position: | chr8:22102894-22102594 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 167 |
| Conread position: | 32-332 |
| Cow position: | chr8:31887951-31888231 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 10, 28 |
| Conread position: | 32-334 |
| Cow position: | chr8:5874446-5874757 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 234 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 26, 102 |
| Conread position: | 32-334 |
| Cow position: | chr8:14617596-14617293 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 139 |
| Conread position: | 32-334 |
| Cow position: | chr8:40432569-40432264 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 32-334 |
| Cow position: | chr8:54159042-54159344 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 45 |
| Conread position: | 32-336 |
| Cow position: | chr8:19772782-19773078 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 9 |
| Conread position: | 32-337 |
| Cow position: | chr8:40273343-40273038 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 26, 149 |
| Conread position: | 33-322 |
| Cow position: | chr8:33438089-33438388 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 25, 52 |
| Conread position: | 33-335 |
| Cow position: | chr8:28387474-28387184 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 63 |
| Conread position: | 50-251 |
| Cow position: | chr8:54828564-54828757 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 50-318 |
| Cow position: | chr8:57404364-57404644 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 53-293 |
| Cow position: | chr8:53891857-53892095 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 196, 44 |
| Conread position: | 53-299 |
| Cow position: | chr8:53359635-53359387 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 116, 85 |
| Conread position: | 53-308 |
| Cow position: | chr8:48682171-48681912 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 177, 125 |
| Conread position: | 53-327 |
| Cow position: | chr8:33818908-33818642 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 198, 94 |
| Conread position: | 53-331 |
| Cow position: | chr8:15870778-15870507 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 198, 77 |
| Conread position: | 53-333 |
| Cow position: | chr8:34439787-34440063 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 196, 101 |
| Conread position: | 53-334 |
| Cow position: | chr8:8480334-8480044 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 53-334 |
| Cow position: | chr8:9672202-9672484 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 114, 184 |
| Conread position: | 53-334 |
| Cow position: | chr8:18801562-18801836 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 53-334 |
| Cow position: | chr8:51877633-51877349 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 49, 83 |
| Conread position: | 53-336 |
| Cow position: | chr8:2974992-2975275 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 151 |
| Conread position: | 53-338 |
| Cow position: | chr8:45686124-45685867 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 247, 43 |
| Conread position: | 53-344 |
| Cow position: | chr8:27369706-27369998 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 58, 125 |
| Conread position: | 54-334 |
| Cow position: | chr8:7104083-7103811 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 203, 49 |
| Conread position: | 55-177 |
| Cow position: | chr8:952354-952476 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 55-334 |
| Cow position: | chr8:47128896-47129171 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 111, 75 |
| Conread position: | 56-195 |
| Cow position: | chr8:51633872-51633736 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 57-189 |
| Cow position: | chr8:20672117-20671982 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 57-324 |
| Cow position: | chr8:19793387-19793127 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 192, 109 |
| Conread position: | 57-334 |
| Cow position: | chr8:6507952-6507670 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 86 |
| Conread position: | 64-327 |
| Cow position: | chr8:1168112-1167858 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 233, 28 |
| Conread position: | 71-327 |
| Cow position: | chr8:51573342-51573085 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 119, 72 |
| Conread position: | 71-333 |
| Cow position: | chr8:19305400-19305643 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 182, 29 |
| Conread position: | 72-291 |
| Cow position: | chr8:19369161-19368954 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 181, 5 |
| Conread position: | 74-334 |
| Cow position: | chr8:10167183-10167429 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 183, 56 |
| Conread position: | 87-334 |
| Cow position: | chr8:11794548-11794781 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 183, 85 |
| Conread position: | 87-337 |
| Cow position: | chr8:49406360-49406127 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 92-333 |
| Cow position: | chr8:26041021-26040794 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 115-334 |
| Cow position: | chr8:31185621-31185838 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 25, 91 |
| Conread position: | 121-334 |
| Cow position: | chr8:5803569-5803787 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 148 |
| Conread position: | 128-339 |
| Cow position: | chr8:9986182-9986401 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 133-294 |
| Cow position: | chr8:7102487-7102649 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 119, 53 |
| Conread position: | 134-334 |
| Cow position: | chr8:32960193-32960001 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 117, 10 |
| Conread position: | 134-335 |
| Cow position: | chr8:32327297-32327499 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 120, 16 |
| Conread position: | 165-340 |
| Cow position: | chr8:14703126-14702952 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 17 |
| Conread position: | 187-336 |
| Cow position: | chr8:32720367-32720516 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 101 |
| Conread position: | 187-355 |
| Cow position: | chr8:21900125-21900294 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 148, 166 |
Show alignments to all cow chromosomes.