Cow genome map

Conread name: Thy1-THY010006F03

Conread position: 1-141
Cow position: chr9:14374393-14374253 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 13

Conread position: 14-327
Cow position: chr9:36508338-36508658 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 44, 24

Conread position: 22-172
Cow position: chr9:40858938-40859094 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 25-344
Cow position: chr9:13072108-13071784 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 131

Conread position: 31-296
Cow position: chr9:4985630-4985898 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 7

Conread position: 31-308
Cow position: chr9:6557554-6557280 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 7

Conread position: 31-339
Cow position: chr9:56411392-56411692 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 27, 7

Conread position: 32-166
Cow position: chr9:20180844-20180713 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 31

Conread position: 32-214
Cow position: chr9:35527443-35527267 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 71

Conread position: 32-250
Cow position: chr9:53597069-53597296 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 23, 0

Conread position: 32-303
Cow position: chr9:9077371-9077632 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 26, 93

Conread position: 32-321
Cow position: chr9:12565114-12564836 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 26, 69

Conread position: 32-334
Cow position: chr9:1527063-1527369 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 153

Conread position: 32-334
Cow position: chr9:26197902-26198175 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 90

Conread position: 32-334
Cow position: chr9:34188715-34188414 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 81

Conread position: 32-334
Cow position: chr9:38698218-38697924 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 6

Conread position: 32-334
Cow position: chr9:41318247-41318555 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 120

Conread position: 32-336
Cow position: chr9:4834712-4834417 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 105

Conread position: 32-337
Cow position: chr9:9539329-9539001 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 233
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 26, 311

Conread position: 32-337
Cow position: chr9:39001500-39001209 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 103

Conread position: 32-337
Cow position: chr9:47200487-47200782 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 77

Conread position: 32-339
Cow position: chr9:10003788-10003477 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 26, 63

Conread position: 32-342
Cow position: chr9:15855304-15855612 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 102

Conread position: 32-368
Cow position: chr9:25812575-25812894 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 33-334
Cow position: chr9:25502775-25503070 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 56

Conread position: 33-337
Cow position: chr9:12183455-12183156 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 8

Conread position: 33-340
Cow position: chr9:2638591-2638893 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 24, 42

Conread position: 34-337
Cow position: chr9:1517565-1517860 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 42, 18

Conread position: 53-179
Cow position: chr9:50108790-50108661 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 87

Conread position: 53-200
Cow position: chr9:46657934-46658078 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 53-284
Cow position: chr9:58125891-58125660 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 114, 79

Conread position: 53-287
Cow position: chr9:7670325-7670102 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 199, 79

Conread position: 53-327
Cow position: chr9:62721136-62721402 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 197, 51

Conread position: 53-334
Cow position: chr9:18570677-18570955 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 127

Conread position: 53-334
Cow position: chr9:34763143-34763426 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 126

Conread position: 54-338
Cow position: chr9:8234307-8234039 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 199, 34

Conread position: 59-338
Cow position: chr9:19835682-19835964 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 33, 49

Conread position: 60-309
Cow position: chr9:45140597-45140347 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 120

Conread position: 62-334
Cow position: chr9:22376964-22376692 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 118

Conread position: 65-244
Cow position: chr9:18566723-18566893 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 68-345
Cow position: chr9:4915370-4915656 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 40, 69

Conread position: 70-334
Cow position: chr9:23294327-23294076 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 187, 39

Conread position: 73-337
Cow position: chr9:26585398-26585147 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 179, 39

Conread position: 75-210
Cow position: chr9:31089932-31089807 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 93-337
Cow position: chr9:15282844-15282603 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 163, 86

Conread position: 107-339
Cow position: chr9:40923000-40923226 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 147, 19

Conread position: 110-295
Cow position: chr9:19081946-19082127 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 141, 56

Conread position: 114-337
Cow position: chr9:64606088-64606308 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 145, 16

Conread position: 115-324
Cow position: chr9:43609342-43609126 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 73

Conread position: 134-318
Cow position: chr9:59114082-59113891 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 189

Conread position: 136-294
Cow position: chr9:42366454-42366297 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 116, 46

Conread position: 152-333
Cow position: chr9:56795112-56795286 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 28

Conread position: 182-334
Cow position: chr9:5622456-5622612 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 192-334
Cow position: chr9:52725804-52725947 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 46

Conread position: 213-337
Cow position: chr9:37301900-37301772 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 0

Show alignments to all cow chromosomes.