Cow genome map
Conread name: | Thy1-THY010006F03 |
Conread position: | 1-141 |
Cow position: | chr9:14374393-14374253 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 32, 13 |
Conread position: | 14-327 |
Cow position: | chr9:36508338-36508658 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 223 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 44, 24 |
Conread position: | 22-172 |
Cow position: | chr9:40858938-40859094 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 125 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 25-344 |
Cow position: | chr9:13072108-13071784 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 131 |
Conread position: | 31-296 |
Cow position: | chr9:4985630-4985898 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 7 |
Conread position: | 31-308 |
Cow position: | chr9:6557554-6557280 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 204 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 24, 7 |
Conread position: | 31-339 |
Cow position: | chr9:56411392-56411692 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 219 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 27, 7 |
Conread position: | 32-166 |
Cow position: | chr9:20180844-20180713 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 40, 31 |
Conread position: | 32-214 |
Cow position: | chr9:35527443-35527267 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 136 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 26, 71 |
Conread position: | 32-250 |
Cow position: | chr9:53597069-53597296 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 171 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 32-303 |
Cow position: | chr9:9077371-9077632 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 205 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 26, 93 |
Conread position: | 32-321 |
Cow position: | chr9:12565114-12564836 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 210 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 26, 69 |
Conread position: | 32-334 |
Cow position: | chr9:1527063-1527369 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 153 |
Conread position: | 32-334 |
Cow position: | chr9:26197902-26198175 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 211 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 26, 90 |
Conread position: | 32-334 |
Cow position: | chr9:34188715-34188414 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 81 |
Conread position: | 32-334 |
Cow position: | chr9:38698218-38697924 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 217 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 26, 6 |
Conread position: | 32-334 |
Cow position: | chr9:41318247-41318555 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 120 |
Conread position: | 32-336 |
Cow position: | chr9:4834712-4834417 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 105 |
Conread position: | 32-337 |
Cow position: | chr9:9539329-9539001 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 233 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 26, 311 |
Conread position: | 32-337 |
Cow position: | chr9:39001500-39001209 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 220 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 23, 103 |
Conread position: | 32-337 |
Cow position: | chr9:47200487-47200782 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 217 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 26, 77 |
Conread position: | 32-339 |
Cow position: | chr9:10003788-10003477 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 221 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 26, 63 |
Conread position: | 32-342 |
Cow position: | chr9:15855304-15855612 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 102 |
Conread position: | 32-368 |
Cow position: | chr9:25812575-25812894 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 0 |
Conread position: | 33-334 |
Cow position: | chr9:25502775-25503070 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 218 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 22, 56 |
Conread position: | 33-337 |
Cow position: | chr9:12183455-12183156 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 8 |
Conread position: | 33-340 |
Cow position: | chr9:2638591-2638893 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 219 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 24, 42 |
Conread position: | 34-337 |
Cow position: | chr9:1517565-1517860 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 224 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 42, 18 |
Conread position: | 53-179 |
Cow position: | chr9:50108790-50108661 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 20, 87 |
Conread position: | 53-200 |
Cow position: | chr9:46657934-46658078 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 117 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 53-284 |
Cow position: | chr9:58125891-58125660 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 180 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 114, 79 |
Conread position: | 53-287 |
Cow position: | chr9:7670325-7670102 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 165 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 199, 79 |
Conread position: | 53-327 |
Cow position: | chr9:62721136-62721402 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 197 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 197, 51 |
Conread position: | 53-334 |
Cow position: | chr9:18570677-18570955 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 127 |
Conread position: | 53-334 |
Cow position: | chr9:34763143-34763426 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 199, 126 |
Conread position: | 54-338 |
Cow position: | chr9:8234307-8234039 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 210 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 199, 34 |
Conread position: | 59-338 |
Cow position: | chr9:19835682-19835964 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 211 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 33, 49 |
Conread position: | 60-309 |
Cow position: | chr9:45140597-45140347 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 120 |
Conread position: | 62-334 |
Cow position: | chr9:22376964-22376692 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 118 |
Conread position: | 65-244 |
Cow position: | chr9:18566723-18566893 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 130 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 68-345 |
Cow position: | chr9:4915370-4915656 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 207 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 40, 69 |
Conread position: | 70-334 |
Cow position: | chr9:23294327-23294076 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 194 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 187, 39 |
Conread position: | 73-337 |
Cow position: | chr9:26585398-26585147 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 195 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 179, 39 |
Conread position: | 75-210 |
Cow position: | chr9:31089932-31089807 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 107 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 93-337 |
Cow position: | chr9:15282844-15282603 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 171 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 163, 86 |
Conread position: | 107-339 |
Cow position: | chr9:40923000-40923226 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 161 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 147, 19 |
Conread position: | 110-295 |
Cow position: | chr9:19081946-19082127 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 134 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 141, 56 |
Conread position: | 114-337 |
Cow position: | chr9:64606088-64606308 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 161 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 145, 16 |
Conread position: | 115-324 |
Cow position: | chr9:43609342-43609126 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 148 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 19, 73 |
Conread position: | 134-318 |
Cow position: | chr9:59114082-59113891 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 139 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 31, 189 |
Conread position: | 136-294 |
Cow position: | chr9:42366454-42366297 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 116 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 116, 46 |
Conread position: | 152-333 |
Cow position: | chr9:56795112-56795286 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 135 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 100, 28 |
Conread position: | 182-334 |
Cow position: | chr9:5622456-5622612 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 115 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 192-334 |
Cow position: | chr9:52725804-52725947 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 17, 46 |
Conread position: | 213-337 |
Cow position: | chr9:37301900-37301772 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.