Cow genome map


           Conread name:
           Thy1-THY010006F03
        

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               43, 66
               

               Conread position:
               29-292
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               29, 107
               

               Conread position:
               31-249
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               22, 64
               

               Conread position:
               31-334
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 27
               

               Conread position:
               31-337
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               31-339
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 7
               

               Conread position:
               32-141
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               26, 103
               

               Conread position:
               32-147
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               32-162
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               32-207
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               32-231
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               32-294
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               26, 110
               

               Conread position:
               32-307
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               25, 93
               

               Conread position:
               32-320
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               206, 26
               

               Conread position:
               32-322
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 105
               

               Conread position:
               32-322
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               32-331
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 284
               

               Conread position:
               32-331
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 26
               

               Conread position:
               32-332
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 79
               

               Conread position:
               32-333
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               28, 92
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 105
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 98
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 94
               

               Conread position:
               32-334
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               26, 113
               

               Conread position:
               32-337
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               26, 120
               

               Conread position:
               32-339
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 106
               

               Conread position:
               32-340
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 105
               

               Conread position:
               32-350
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               130, 58
               

               Conread position:
               33-164
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               25, 5
               

               Conread position:
               33-231
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               33-247
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 83
               

               Conread position:
               33-338
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 60
               

               Conread position:
               33-339
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 152
               

               Conread position:
               33-343
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               53-145
               

               Cow position:
               
               

               Alignm length:
               93
               

               Alignm identity:
               80
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               53-166
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               53-227
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               83, 40
               

               Conread position:
               53-282
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               50, 103
               

               Conread position:
               53-308
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               113, 12
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               216
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               192, 117
               

               Conread position:
               53-337
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               53-339
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 49
               

               Conread position:
               53-339
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 83
               

               Conread position:
               53-343
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 70
               

               Conread position:
               54-329
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 90
               

               Conread position:
               54-331
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 127
               

               Conread position:
               54-334
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 76
               

               Conread position:
               54-341
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               55-288
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               57-333
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 75
               

               Conread position:
               58-327
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               62-364
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 70
               

               Conread position:
               66-161
               

               Cow position:
               
               

               Alignm length:
               96
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               66-195
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               66-333
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               205
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               101, 77
               

               Conread position:
               69-339
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               17, 8
               

               Conread position:
               71-330
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               73-337
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               26, 5
               

               Conread position:
               78-189
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               79-346
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               29, 66
               

               Conread position:
               82-341
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               19, 7
               

               Conread position:
               93-329
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               105-272
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               147, 73
               

               Conread position:
               107-337
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               146, 30
               

               Conread position:
               107-339
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               146, 22
               

               Conread position:
               117-334
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               132-326
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               120, 143
               

               Conread position:
               133-338
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               54, 17
               

               Conread position:
               182-337
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               183-334
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               183-337
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               191-340
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 0
               
Show alignments to all cow chromosomes.