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Cow genome map

           
Conread name:
           
Thy1-THY010006F10
        

               
Conread position:
               
1-199
               

               
Cow position:
               
chr11:62606639-62606438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr11:5559502-5559256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr11:33374186-33373965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
15-232
               

               
Cow position:
               
chr11:6395960-6395745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
15-238
               

               
Cow position:
               
chr11:19739190-19739412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
15-238
               

               
Cow position:
               
chr11:32777881-32777663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
15-238
               

               
Cow position:
               
chr11:34644860-34644639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
17-223
               

               
Cow position:
               
chr11:63498924-63499133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 107
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr11:50472522-50472308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
85, 24
               

               
Conread position:
               
20-225
               

               
Cow position:
               
chr11:3896496-3896705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 6
               

               
Conread position:
               
21-225
               

               
Cow position:
               
chr11:84228521-84228721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
131, 86
               

               
Conread position:
               
21-236
               

               
Cow position:
               
chr11:8544815-8545031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
23-238
               

               
Cow position:
               
chr11:70517377-70517610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
25-226
               

               
Cow position:
               
chr11:35980942-35981146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 191
               

               
Conread position:
               
26-213
               

               
Cow position:
               
chr11:21590585-21590392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
27-223
               

               
Cow position:
               
chr11:26535980-26535784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 97
               

               
Conread position:
               
27-228
               

               
Cow position:
               
chr11:55398955-55399158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
77, 114
               

               
Conread position:
               
27-234
               

               
Cow position:
               
chr11:31875289-31875080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
27-238
               

               
Cow position:
               
chr11:17859957-17860172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
76, 140
               

               
Conread position:
               
27-238
               

               
Cow position:
               
chr11:22676308-22676099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
77, 139
               

               
Conread position:
               
27-238
               

               
Cow position:
               
chr11:53778819-53778600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
13, 194
               

               
Conread position:
               
27-242
               

               
Cow position:
               
chr11:63975327-63975109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
77, 190
               

               
Conread position:
               
28-171
               

               
Cow position:
               
chr11:53460895-53460746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 109
               

               
Conread position:
               
28-202
               

               
Cow position:
               
chr11:81175795-81175615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
17, 103
               

               
Conread position:
               
28-207
               

               
Cow position:
               
chr11:26442307-26442491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
28-209
               

               
Cow position:
               
chr11:32108493-32108677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
75, 107
               

               
Conread position:
               
28-221
               

               
Cow position:
               
chr11:76248240-76248048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 16
               

               
Conread position:
               
28-226
               

               
Cow position:
               
chr11:42064030-42064229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
75, 14
               

               
Conread position:
               
28-229
               

               
Cow position:
               
chr11:36917570-36917784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
75, 198
               

               
Conread position:
               
28-237
               

               
Cow position:
               
chr11:27502508-27502717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
28-238
               

               
Cow position:
               
chr11:9237653-9237863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
28-238
               

               
Cow position:
               
chr11:68883915-68883702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 188
               

               
Conread position:
               
29-181
               

               
Cow position:
               
chr11:80695047-80695203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
29-196
               

               
Cow position:
               
chr11:56348638-56348806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
29-198
               

               
Cow position:
               
chr11:36847363-36847190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
29-200
               

               
Cow position:
               
chr11:67208443-67208273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
29-201
               

               
Cow position:
               
chr11:17552886-17553061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
29-202
               

               
Cow position:
               
chr11:37565063-37564892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
126, 78
               

               
Conread position:
               
29-202
               

               
Cow position:
               
chr11:80007868-80008049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
29-202
               

               
Cow position:
               
chr11:83028185-83028012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 10
               

               
Conread position:
               
29-207
               

               
Cow position:
               
chr11:30894810-30894990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
29-215
               

               
Cow position:
               
chr11:4621242-4621425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
130, 13
               

               
Conread position:
               
29-215
               

               
Cow position:
               
chr11:53817049-53816858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
29-219
               

               
Cow position:
               
chr11:23278769-23278963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 40
               

               
Conread position:
               
29-220
               

               
Cow position:
               
chr11:5218969-5219160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
29-222
               

               
Cow position:
               
chr11:81065857-81066050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
29-224
               

               
Cow position:
               
chr11:2874594-2874395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
29-225
               

               
Cow position:
               
chr11:5217266-5217465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 81
               

               
Conread position:
               
29-225
               

               
Cow position:
               
chr11:23271812-23272008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
29-225
               

               
Cow position:
               
chr11:79666069-79666265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
29-226
               

               
Cow position:
               
chr11:36136303-36136103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
16, 142
               

               
Conread position:
               
29-226
               

               
Cow position:
               
chr11:46329692-46329495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
29-226
               

               
Cow position:
               
chr11:75285563-75285764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
29-227
               

               
Cow position:
               
chr11:30322300-30322500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
29-228
               

               
Cow position:
               
chr11:63165456-63165653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
29-229
               

               
Cow position:
               
chr11:35347557-35347760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 187
               

               
Conread position:
               
29-229
               

               
Cow position:
               
chr11:42155420-42155217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 186
               

               
Conread position:
               
29-230
               

               
Cow position:
               
chr11:5176187-5176388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
123, 78
               

               
Conread position:
               
29-230
               

               
Cow position:
               
chr11:21124416-21124615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
29-230
               

               
Cow position:
               
chr11:25791497-25791703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
7, 189
               

               
Conread position:
               
29-230
               

               
Cow position:
               
chr11:53773877-53773673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
74, 187
               

               
Conread position:
               
29-231
               

               
Cow position:
               
chr11:20205664-20205861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
29-231
               

               
Cow position:
               
chr11:44032201-44032002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
29-231
               

               
Cow position:
               
chr11:76890234-76890036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr11:7314955-7315159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 99
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr11:18119696-18119491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
75, 49
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr11:20234877-20234674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
74, 10
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr11:29308778-29308570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 188
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr11:32254023-32254227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr11:42016444-42016649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr11:47110450-47110242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 190
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr11:62742454-62742653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
74, 94
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr11:68913338-68913130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
16, 189
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr11:70458240-70458031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 119
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr11:86895566-86895366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
75, 93
               

               
Conread position:
               
29-233
               

               
Cow position:
               
chr11:63998896-63999103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
74, 186
               

               
Conread position:
               
29-235
               

               
Cow position:
               
chr11:42067059-42066846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 72
               

               
Conread position:
               
29-236
               

               
Cow position:
               
chr11:25604147-25603933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
74, 191
               

               
Conread position:
               
29-236
               

               
Cow position:
               
chr11:29677401-29677192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 100
               

               
Conread position:
               
29-236
               

               
Cow position:
               
chr11:63065847-63065639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
29-237
               

               
Cow position:
               
chr11:13863906-13864120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
27, 190
               

               
Conread position:
               
29-237
               

               
Cow position:
               
chr11:19591803-19592010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr11:2327882-2327669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr11:31537254-31537456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 125
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr11:56288739-56288529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
74, 95
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr11:65826558-65826767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr11:71934753-71934971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
24, 96
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr11:75479830-75480036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr11:78380875-78381077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
123, 78
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr11:84385444-84385653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
29-240
               

               
Cow position:
               
chr11:5961500-5961287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
29-242
               

               
Cow position:
               
chr11:42084480-42084696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
29-243
               

               
Cow position:
               
chr11:5264289-5264075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
29-243
               

               
Cow position:
               
chr11:6594035-6594265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
29-243
               

               
Cow position:
               
chr11:7500942-7500727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
29-243
               

               
Cow position:
               
chr11:24438025-24438240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
74, 151
               

               
Conread position:
               
29-243
               

               
Cow position:
               
chr11:31413650-31413438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
29-247
               

               
Cow position:
               
chr11:46314207-46313986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
75, 198
               

               
Conread position:
               
29-254
               

               
Cow position:
               
chr11:37099978-37100201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
74, 101
               

               
Conread position:
               
30-236
               

               
Cow position:
               
chr11:47310791-47311000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
73, 186
               

               
Conread position:
               
30-238
               

               
Cow position:
               
chr11:3740158-3739937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
15, 197
               

               
Conread position:
               
30-239
               

               
Cow position:
               
chr11:21830019-21830227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
30-242
               

               
Cow position:
               
chr11:68660422-68660631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 14
               

               
Conread position:
               
31-205
               

               
Cow position:
               
chr11:30986828-30986654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 92
               

               
Conread position:
               
31-224
               

               
Cow position:
               
chr11:58472438-58472246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
73, 33
               

               
Conread position:
               
31-236
               

               
Cow position:
               
chr11:42498036-42497832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 98
               

               
Conread position:
               
31-237
               

               
Cow position:
               
chr11:18699062-18698864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
32-207
               

               
Cow position:
               
chr11:63407885-63407709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 53
               

               
Conread position:
               
32-230
               

               
Cow position:
               
chr11:73573838-73573637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
32, 27
               

               
Conread position:
               
32-232
               

               
Cow position:
               
chr11:41215924-41215722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
72, 54
               

               
Conread position:
               
32-232
               

               
Cow position:
               
chr11:57608275-57608466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
123, 61
               

               
Conread position:
               
32-238
               

               
Cow position:
               
chr11:19247014-19247215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 46
               

               
Conread position:
               
32-238
               

               
Cow position:
               
chr11:30808401-30808610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 181
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr11:27907961-27907747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 89
               

               
Conread position:
               
33-201
               

               
Cow position:
               
chr11:35922012-35922178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
33-232
               

               
Cow position:
               
chr11:41980015-41980215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
33-237
               

               
Cow position:
               
chr11:31417615-31417406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 184
               

               
Conread position:
               
33-243
               

               
Cow position:
               
chr11:42835764-42835972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 9
               

               
Conread position:
               
34-148
               

               
Cow position:
               
chr11:43594239-43594353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
69, 95
               

               
Conread position:
               
34-238
               

               
Cow position:
               
chr11:64029077-64029279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
13, 102
               

               
Conread position:
               
35-185
               

               
Cow position:
               
chr11:24551579-24551426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 143
               

               
Conread position:
               
35-207
               

               
Cow position:
               
chr11:37042163-37041985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
35-220
               

               
Cow position:
               
chr11:41278375-41278187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
68, 181
               

               
Conread position:
               
35-229
               

               
Cow position:
               
chr11:39006-38803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
35-238
               

               
Cow position:
               
chr11:6245509-6245302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
68, 100
               

               
Conread position:
               
35-238
               

               
Cow position:
               
chr11:13592928-13592719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
10, 184
               

               
Conread position:
               
35-238
               

               
Cow position:
               
chr11:15369577-15369371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
69, 182
               

               
Conread position:
               
35-238
               

               
Cow position:
               
chr11:48660117-48659918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
124, 7
               

               
Conread position:
               
35-238
               

               
Cow position:
               
chr11:57503667-57503466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
83, 7
               

               
Conread position:
               
35-238
               

               
Cow position:
               
chr11:71868410-71868619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
36-182
               

               
Cow position:
               
chr11:26823299-26823148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
36-185
               

               
Cow position:
               
chr11:33271616-33271466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
67, 97
               

               
Conread position:
               
36-228
               

               
Cow position:
               
chr11:38236432-38236245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
68, 49
               

               
Conread position:
               
36-237
               

               
Cow position:
               
chr11:47314238-47314447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
37-171
               

               
Cow position:
               
chr11:65939676-65939813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
67, 44
               

               
Conread position:
               
37-223
               

               
Cow position:
               
chr11:13940373-13940183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
37-228
               

               
Cow position:
               
chr11:36300398-36300584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
38-238
               

               
Cow position:
               
chr11:39250150-39249956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
39-182
               

               
Cow position:
               
chr11:38656998-38657145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
39-185
               

               
Cow position:
               
chr11:1265358-1265508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
39-201
               

               
Cow position:
               
chr11:48296209-48296050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
39-210
               

               
Cow position:
               
chr11:68570197-68570370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 51
               

               
Conread position:
               
39-220
               

               
Cow position:
               
chr11:17369710-17369531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 75
               

               
Conread position:
               
39-222
               

               
Cow position:
               
chr11:80370298-80370114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 142
               

               
Conread position:
               
39-223
               

               
Cow position:
               
chr11:68909668-68909857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
39-226
               

               
Cow position:
               
chr11:6423214-6423403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
64, 85
               

               
Conread position:
               
39-228
               

               
Cow position:
               
chr11:52380688-52380878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
66, 87
               

               
Conread position:
               
39-232
               

               
Cow position:
               
chr11:15772529-15772722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
39-234
               

               
Cow position:
               
chr11:42291656-42291850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 96
               

               
Conread position:
               
39-235
               

               
Cow position:
               
chr11:62789311-62789115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 75
               

               
Conread position:
               
39-237
               

               
Cow position:
               
chr11:34467748-34467555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 78
               

               
Conread position:
               
39-238
               

               
Cow position:
               
chr11:35669782-35669968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
65, 30
               

               
Conread position:
               
39-238
               

               
Cow position:
               
chr11:53510311-53510516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
36, 173
               

               
Conread position:
               
39-238
               

               
Cow position:
               
chr11:63382013-63382207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
120, 65
               

               
Conread position:
               
39-238
               

               
Cow position:
               
chr11:66939407-66939609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
64, 178
               

               
Conread position:
               
39-240
               

               
Cow position:
               
chr11:40792509-40792723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
39-242
               

               
Cow position:
               
chr11:30708689-30708486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
66, 175
               

               
Conread position:
               
39-246
               

               
Cow position:
               
chr11:12555120-12555330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
62, 177
               

               
Conread position:
               
40-222
               

               
Cow position:
               
chr11:23220543-23220362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 52
               

               
Conread position:
               
40-232
               

               
Cow position:
               
chr11:21508194-21507992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 183
               

               
Conread position:
               
40-236
               

               
Cow position:
               
chr11:866463-866276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
63, 106
               

               
Conread position:
               
42-171
               

               
Cow position:
               
chr11:68592200-68592067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
42-192
               

               
Cow position:
               
chr11:44016426-44016272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
42-192
               

               
Cow position:
               
chr11:51683397-51683244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 93
               

               
Conread position:
               
42-198
               

               
Cow position:
               
chr11:44176774-44176618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
61, 40
               

               
Conread position:
               
42-200
               

               
Cow position:
               
chr11:63695657-63695825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr11:1932307-1932473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
61, 85
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr11:63475490-63475654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
42-207
               

               
Cow position:
               
chr11:258992-259158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
42-207
               

               
Cow position:
               
chr11:25119755-25119918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
42-214
               

               
Cow position:
               
chr11:10066530-10066355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
42-214
               

               
Cow position:
               
chr11:34778262-34778437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
42-215
               

               
Cow position:
               
chr11:70600646-70600823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
42-219
               

               
Cow position:
               
chr11:38223612-38223786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
119, 55
               

               
Conread position:
               
42-221
               

               
Cow position:
               
chr11:49872706-49872886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
61, 80
               

               
Conread position:
               
42-222
               

               
Cow position:
               
chr11:36092738-36092917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 52
               

               
Conread position:
               
42-222
               

               
Cow position:
               
chr11:79548752-79548938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
42-223
               

               
Cow position:
               
chr11:36361460-36361646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
42-223
               

               
Cow position:
               
chr11:40608412-40608595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 161
               

               
Conread position:
               
42-226
               

               
Cow position:
               
chr11:18924928-18924741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
61, 174
               

               
Conread position:
               
42-226
               

               
Cow position:
               
chr11:33368252-33368078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
42-226
               

               
Cow position:
               
chr11:49210636-49210826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
61, 177
               

               
Conread position:
               
42-226
               

               
Cow position:
               
chr11:57767370-57767186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
117, 58
               

               
Conread position:
               
42-226
               

               
Cow position:
               
chr11:65058431-65058617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
62, 173
               

               
Conread position:
               
42-226
               

               
Cow position:
               
chr11:77241883-77241699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 73
               

               
Conread position:
               
42-228
               

               
Cow position:
               
chr11:36182872-36182684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
62, 43
               

               
Conread position:
               
42-228
               

               
Cow position:
               
chr11:45276967-45277155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 160
               

               
Conread position:
               
42-228
               

               
Cow position:
               
chr11:46922706-46922892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
109, 65
               

               
Conread position:
               
42-230
               

               
Cow position:
               
chr11:58048512-58048323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr11:27913467-27913274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 75
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr11:30165692-30165499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
61, 175
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr11:42786501-42786694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 166
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr11:47784961-47784764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 119
               

               
Conread position:
               
42-236
               

               
Cow position:
               
chr11:12080024-12079822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
61, 179
               

               
Conread position:
               
42-236
               

               
Cow position:
               
chr11:35351852-35352055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 163
               

               
Conread position:
               
42-236
               

               
Cow position:
               
chr11:36521061-36520860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
64, 87
               

               
Conread position:
               
42-237
               

               
Cow position:
               
chr11:29786312-29786514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 178
               

               
Conread position:
               
42-237
               

               
Cow position:
               
chr11:66572311-66572512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 175
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr11:4207492-4207295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr11:6233697-6233896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
61, 174
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr11:9270557-9270741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
110, 35
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr11:10095524-10095327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr11:10563186-10562992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr11:41985867-41986062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
61, 81
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr11:46427226-46427424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr11:55334100-55333893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 183
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr11:62230369-62230164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 180
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr11:66099676-66099879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 178
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr11:66188140-66188333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr11:67600959-67600768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr11:71111079-71110875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 36
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr11:74427860-74427661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 174
               

               
Conread position:
               
42-239
               

               
Cow position:
               
chr11:85571625-85571823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
42-241
               

               
Cow position:
               
chr11:83042059-83042275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
61, 188
               

               
Conread position:
               
42-242
               

               
Cow position:
               
chr11:1980084-1980289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 176
               

               
Conread position:
               
42-242
               

               
Cow position:
               
chr11:38334702-38334503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
42-243
               

               
Cow position:
               
chr11:3597300-3597096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 181
               

               
Conread position:
               
42-250
               

               
Cow position:
               
chr11:77208268-77208046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
63, 150
               

               
Conread position:
               
42-251
               

               
Cow position:
               
chr11:32260712-32260505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
53, 124
               

               
Conread position:
               
43-165
               

               
Cow position:
               
chr11:22102578-22102699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
61, 108
               

               
Conread position:
               
43-185
               

               
Cow position:
               
chr11:28078669-28078529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
109, 57
               

               
Conread position:
               
43-196
               

               
Cow position:
               
chr11:62102266-62102423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
43-201
               

               
Cow position:
               
chr11:32800807-32800645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
43-203
               

               
Cow position:
               
chr11:76896193-76896357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
43-206
               

               
Cow position:
               
chr11:33369332-33369165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
43-207
               

               
Cow position:
               
chr11:25968673-25968841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 145
               

               
Conread position:
               
43-207
               

               
Cow position:
               
chr11:26057467-26057637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
43-207
               

               
Cow position:
               
chr11:35732903-35733070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
43-214
               

               
Cow position:
               
chr11:19147962-19148130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
109, 58
               

               
Conread position:
               
43-215
               

               
Cow position:
               
chr11:4363737-4363906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
43-215
               

               
Cow position:
               
chr11:35924242-35924066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
43-215
               

               
Cow position:
               
chr11:40538729-40538556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 78
               

               
Conread position:
               
43-216
               

               
Cow position:
               
chr11:63849770-63849947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
43-220
               

               
Cow position:
               
chr11:3728666-3728485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
43-220
               

               
Cow position:
               
chr11:44620133-44619956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
43-224
               

               
Cow position:
               
chr11:66041452-66041276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
109, 58
               

               
Conread position:
               
43-225
               

               
Cow position:
               
chr11:75749645-75749476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
43-228
               

               
Cow position:
               
chr11:19578842-19579022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 42
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr11:23518437-23518628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 173
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr11:48672894-48672704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 172
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr11:69417583-69417395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
62, 170
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr11:77017410-77017233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr11:77758581-77758769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
115, 91
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr11:1485054-1485236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 57
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr11:9836275-9836466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 173
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr11:41123417-41123610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
61, 182
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr11:45350330-45350521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
61, 173
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr11:46784643-46784465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 93
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr11:64781268-64781077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 174
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:2788575-2788383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
64, 172
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:5417066-5416874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
61, 172
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:6094224-6094413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
62, 83
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:7385614-7385429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 64
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:7460450-7460625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:16315054-16314862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
60, 170
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:27343452-27343260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
61, 180
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:29954548-29954361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 58
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:34968433-34968624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
61, 138
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:35769067-35768875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
60, 172
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:35924036-35923844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 172
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:36218471-36218282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:36914385-36914577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
61, 172
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:36940414-36940606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
60, 172
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:37804372-37804564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
61, 172
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:46747679-46747871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
61, 173
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:55348402-55348210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 172
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:55636045-55636236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
61, 133
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:59024173-59024370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 150
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:69168768-69168575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:70951047-70950860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
107, 58
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr11:80893962-80893772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
61, 172
               

               
Conread position:
               
43-236
               

               
Cow position:
               
chr11:52132641-52132836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 120
               

               
Conread position:
               
43-237
               

               
Cow position:
               
chr11:34616441-34616243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
61, 178
               

               
Conread position:
               
43-237
               

               
Cow position:
               
chr11:35212991-35213183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
43-237
               

               
Cow position:
               
chr11:40459285-40459092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
43-237
               

               
Cow position:
               
chr11:87171896-87172092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
109, 172
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr11:8670197-8669994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr11:9699075-9699261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
109, 53
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr11:17517579-17517382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr11:20194244-20194442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
64, 172
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr11:26143919-26144112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr11:39462799-39462607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
103, 60
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr11:41213232-41213026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr11:41438005-41438203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 172
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr11:43914473-43914275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
62, 173
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr11:45619530-45619336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr11:47837499-47837304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr11:51846477-51846281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr11:52690345-52690536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
109, 40
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr11:56311420-56311612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
61, 107
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr11:62811476-62811281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr11:62889712-62889910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 172
               

               
Conread position:
               
44-199
               

               
Cow position:
               
chr11:43641567-43641408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
44-207
               

               
Cow position:
               
chr11:35544265-35544098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
44-215
               

               
Cow position:
               
chr11:65495165-65495334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
115, 63
               

               
Conread position:
               
44-218
               

               
Cow position:
               
chr11:18777414-18777594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 164
               

               
Conread position:
               
44-222
               

               
Cow position:
               
chr11:58186051-58185882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
44-222
               

               
Cow position:
               
chr11:85186349-85186528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
44-223
               

               
Cow position:
               
chr11:52297044-52297222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
44-223
               

               
Cow position:
               
chr11:74152570-74152757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
44-226
               

               
Cow position:
               
chr11:6581013-6580828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 178
               

               
Conread position:
               
44-226
               

               
Cow position:
               
chr11:17721622-17721806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 82
               

               
Conread position:
               
44-226
               

               
Cow position:
               
chr11:63485111-63484931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 66
               

               
Conread position:
               
44-228
               

               
Cow position:
               
chr11:45671201-45671376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
44-229
               

               
Cow position:
               
chr11:80586444-80586267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
115, 7
               

               
Conread position:
               
44-229
               

               
Cow position:
               
chr11:85723873-85723690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
60, 116
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr11:30209644-30209828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
44-231
               

               
Cow position:
               
chr11:5075051-5075237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 109
               

               
Conread position:
               
44-231
               

               
Cow position:
               
chr11:34646774-34646580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 175
               

               
Conread position:
               
44-231
               

               
Cow position:
               
chr11:49396347-49396535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
114, 56
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr11:4199453-4199261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 161
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr11:17074049-17074229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr11:21843960-21844143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
59, 68
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr11:32782695-32782894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
62, 181
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr11:41313483-41313667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
115, 34
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr11:46999165-46998972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 175
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr11:55744648-55744457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 171
               

               
Conread position:
               
44-234
               

               
Cow position:
               
chr11:64101952-64101759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
44-234
               

               
Cow position:
               
chr11:80412830-80413025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 172
               

               
Conread position:
               
44-235
               

               
Cow position:
               
chr11:60296917-60296717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
57, 166
               

               
Conread position:
               
44-236
               

               
Cow position:
               
chr11:35724149-35723954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 169
               

               
Conread position:
               
44-237
               

               
Cow position:
               
chr11:11125844-11125648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
44-237
               

               
Cow position:
               
chr11:17889548-17889746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
59, 174
               

               
Conread position:
               
44-237
               

               
Cow position:
               
chr11:31228132-31227947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
44-237
               

               
Cow position:
               
chr11:51729453-51729271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
103, 56
               

               
Conread position:
               
44-237
               

               
Cow position:
               
chr11:68326683-68326879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 172
               

               
Conread position:
               
44-237
               

               
Cow position:
               
chr11:71492685-71492875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
115, 17
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr11:25620211-25620413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 70
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr11:30638773-30638966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
103, 56
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr11:32398820-32398622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
57, 160
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr11:37918869-37919062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
34, 118
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr11:40395616-40395423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
6, 71
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr11:49153119-49152933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr11:67312964-67312764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr11:70206494-70206304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 72
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr11:70978556-70978750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr11:78820328-78820135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
44-239
               

               
Cow position:
               
chr11:41576694-41576885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
44-243
               

               
Cow position:
               
chr11:73940383-73940581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
59, 171
               

               
Conread position:
               
45-191
               

               
Cow position:
               
chr11:18574676-18574826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
45-206
               

               
Cow position:
               
chr11:49486967-49486793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
45-221
               

               
Cow position:
               
chr11:3715000-3714821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
59, 171
               

               
Conread position:
               
45-228
               

               
Cow position:
               
chr11:7571798-7571618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 80
               

               
Conread position:
               
45-231
               

               
Cow position:
               
chr11:36977985-36977797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 163
               

               
Conread position:
               
45-232
               

               
Cow position:
               
chr11:1380855-1380665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 178
               

               
Conread position:
               
45-232
               

               
Cow position:
               
chr11:54428798-54428609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 170
               

               
Conread position:
               
45-232
               

               
Cow position:
               
chr11:76653199-76653009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 168
               

               
Conread position:
               
45-236
               

               
Cow position:
               
chr11:13500188-13500001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
45-237
               

               
Cow position:
               
chr11:15366800-15366988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
102, 55
               

               
Conread position:
               
45-238
               

               
Cow position:
               
chr11:8988052-8988246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 144
               

               
Conread position:
               
45-238
               

               
Cow position:
               
chr11:77013948-77013768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 91
               

               
Conread position:
               
45-243
               

               
Cow position:
               
chr11:75246343-75246138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
46-171
               

               
Cow position:
               
chr11:899613-899483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
46-231
               

               
Cow position:
               
chr11:45872132-45872320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 89
               

               
Conread position:
               
46-238
               

               
Cow position:
               
chr11:55762033-55761852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
104, 7
               

               
Conread position:
               
46-238
               

               
Cow position:
               
chr11:83398084-83397889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
57, 171
               

               
Conread position:
               
47-232
               

               
Cow position:
               
chr11:8683902-8684090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
48-238
               

               
Cow position:
               
chr11:13042973-13043162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
55, 66
               

               
Conread position:
               
49-205
               

               
Cow position:
               
chr11:6319957-6320117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
49-231
               

               
Cow position:
               
chr11:40516941-40517125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 151
               

               
Conread position:
               
49-232
               

               
Cow position:
               
chr11:60486242-60486429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
49-236
               

               
Cow position:
               
chr11:8496207-8496018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
55, 165
               

               
Conread position:
               
49-238
               

               
Cow position:
               
chr11:2084319-2084127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
49-238
               

               
Cow position:
               
chr11:6633900-6633694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 181
               

               
Conread position:
               
49-238
               

               
Cow position:
               
chr11:7874314-7874122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
54, 167
               

               
Conread position:
               
49-238
               

               
Cow position:
               
chr11:19487305-19487497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
54, 174
               

               
Conread position:
               
49-238
               

               
Cow position:
               
chr11:35109366-35109554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
49-238
               

               
Cow position:
               
chr11:70483677-70483868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
50-243
               

               
Cow position:
               
chr11:49207884-49207690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 151
               

               
Conread position:
               
51-215
               

               
Cow position:
               
chr11:26343274-26343107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
52, 78
               

               
Conread position:
               
51-226
               

               
Cow position:
               
chr11:60720282-60720460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
53, 165
               

               
Conread position:
               
51-227
               

               
Cow position:
               
chr11:21173265-21173443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
97, 163
               

               
Conread position:
               
51-232
               

               
Cow position:
               
chr11:1067266-1067450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 165
               

               
Conread position:
               
51-232
               

               
Cow position:
               
chr11:32710688-32710504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 166
               

               
Conread position:
               
51-232
               

               
Cow position:
               
chr11:46884547-46884363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
53, 164
               

               
Conread position:
               
51-232
               

               
Cow position:
               
chr11:47412014-47411831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 176
               

               
Conread position:
               
51-232
               

               
Cow position:
               
chr11:71854112-71854289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 66
               

               
Conread position:
               
51-238
               

               
Cow position:
               
chr11:25783887-25783696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 166
               

               
Conread position:
               
51-238
               

               
Cow position:
               
chr11:36920406-36920594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
51-238
               

               
Cow position:
               
chr11:58173807-58173609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 158
               

               
Conread position:
               
52-215
               

               
Cow position:
               
chr11:30600019-30600186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
52-225
               

               
Cow position:
               
chr11:64022939-64023103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
52-226
               

               
Cow position:
               
chr11:2836031-2835854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
52, 164
               

               
Conread position:
               
52-226
               

               
Cow position:
               
chr11:39554018-39554196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 165
               

               
Conread position:
               
52-229
               

               
Cow position:
               
chr11:37435819-37435995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
52-230
               

               
Cow position:
               
chr11:27760689-27760509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
52-232
               

               
Cow position:
               
chr11:63849089-63849270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
52-238
               

               
Cow position:
               
chr11:77745078-77745268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
52, 164
               

               
Conread position:
               
53-238
               

               
Cow position:
               
chr11:29659729-29659543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
54-232
               

               
Cow position:
               
chr11:26632844-26633024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
54-237
               

               
Cow position:
               
chr11:39854853-39855029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
54-238
               

               
Cow position:
               
chr11:63435691-63435505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 156
               

               
Conread position:
               
55-238
               

               
Cow position:
               
chr11:64409134-64408960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
48, 59
               

               
Conread position:
               
66-232
               

               
Cow position:
               
chr11:18508872-18509041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
39, 150
               

               
Conread position:
               
66-232
               

               
Cow position:
               
chr11:22874627-22874458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 146
               

               
Conread position:
               
68-222
               

               
Cow position:
               
chr11:17807806-17807965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
69-210
               

               
Cow position:
               
chr11:30370256-30370115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
69-238
               

               
Cow position:
               
chr11:18791909-18792084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
35, 150
               

               
Conread position:
               
69-242
               

               
Cow position:
               
chr11:87155675-87155500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 144
               

               
Conread position:
               
69-244
               

               
Cow position:
               
chr11:35140064-35139885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 158
               

               
Conread position:
               
70-207
               

               
Cow position:
               
chr11:7651912-7652053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
70-207
               

               
Cow position:
               
chr11:55117599-55117458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
70-225
               

               
Cow position:
               
chr11:34136394-34136237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
89, 146
               

               
Conread position:
               
70-243
               

               
Cow position:
               
chr11:4392193-4392369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 146
               

               
Conread position:
               
72-232
               

               
Cow position:
               
chr11:75090066-75090229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 143
               

               
Conread position:
               
75-238
               

               
Cow position:
               
chr11:35926760-35926921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
30, 137
               

               
Conread position:
               
77-226
               

               
Cow position:
               
chr11:29482286-29482440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 141
               

               
Conread position:
               
77-238
               

               
Cow position:
               
chr11:67804891-67804733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
79-232
               

               
Cow position:
               
chr11:34113406-34113254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
83-238
               

               
Cow position:
               
chr11:18243805-18243957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
86-232
               

               
Cow position:
               
chr11:33414375-33414226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 127
               

               
Conread position:
               
87-238
               

               
Cow position:
               
chr11:2344388-2344234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
91-227
               

               
Cow position:
               
chr11:81614380-81614519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
13, 126
               

               
Conread position:
               
92-238
               

               
Cow position:
               
chr11:45849365-45849516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
12, 126
               

               
Conread position:
               
100-242
               

               
Cow position:
               
chr11:48232952-48232807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 116
               

               
Conread position:
               
101-259
               

               
Cow position:
               
chr11:62168209-62168367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 46
               

               
Conread position:
               
104-232
               

               
Cow position:
               
chr11:37335970-37336099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
48, 107
               

               
Conread position:
               
105-224
               

               
Cow position:
               
chr11:37982459-37982580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
54, 110
               

               
Conread position:
               
105-230
               

               
Cow position:
               
chr11:54334447-54334320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 110
               

               
Conread position:
               
105-235
               

               
Cow position:
               
chr11:70826067-70825935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
45, 111
               

               
Conread position:
               
105-238
               

               
Cow position:
               
chr11:61958626-61958760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 108
               

               
Conread position:
               
105-245
               

               
Cow position:
               
chr11:5789781-5789923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
54, 110
               

               
Conread position:
               
106-238
               

               
Cow position:
               
chr11:83687316-83687450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 109
               

               
Conread position:
               
108-228
               

               
Cow position:
               
chr11:59916263-59916140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
108-236
               

               
Cow position:
               
chr11:62778557-62778428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 112
               

               
Conread position:
               
110-235
               

               
Cow position:
               
chr11:32615850-32615722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 106
               

               
Conread position:
               
111-238
               

               
Cow position:
               
chr11:15682867-15682996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
48, 104
               

               
Conread position:
               
111-238
               

               
Cow position:
               
chr11:30925267-30925140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 102
               

               
Conread position:
               
114-245
               

               
Cow position:
               
chr11:61137065-61137198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
115-230
               

               
Cow position:
               
chr11:69415490-69415605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
44, 97
               

               
Conread position:
               
116-238
               

               
Cow position:
               
chr11:40478745-40478869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
121-238
               

               
Cow position:
               
chr11:80761275-80761393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
337-480
               

               
Cow position:
               
chr11:30475911-30475771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
338-472
               

               
Cow position:
               
chr11:15772806-15772942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
338-476
               

               
Cow position:
               
chr11:56518400-56518536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
338-480
               

               
Cow position:
               
chr11:6620376-6620519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
339-479
               

               
Cow position:
               
chr11:17112720-17112853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 93
               

               
Conread position:
               
339-480
               

               
Cow position:
               
chr11:8840830-8840968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
339-480
               

               
Cow position:
               
chr11:41809566-41809705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
339-480
               

               
Cow position:
               
chr11:58102863-58103002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
340-462
               

               
Cow position:
               
chr11:36301169-36301290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
340-480
               

               
Cow position:
               
chr11:1485959-1486094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
340-480
               

               
Cow position:
               
chr11:85723609-85723474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
340-502
               

               
Cow position:
               
chr11:17889816-17889976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 98
               

               
Conread position:
               
341-480
               

               
Cow position:
               
chr11:1485449-1485588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
341-480
               

               
Cow position:
               
chr11:4732248-4732111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
341-480
               

               
Cow position:
               
chr11:17321566-17321430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
341-480
               

               
Cow position:
               
chr11:32609908-32609764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 37
               

               
Conread position:
               
341-480
               

               
Cow position:
               
chr11:45631856-45631992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
341-507
               

               
Cow position:
               
chr11:5031868-5032034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
134, 42
               

               
Conread position:
               
342-479
               

               
Cow position:
               
chr11:3282956-3282825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
343-465
               

               
Cow position:
               
chr11:65607787-65607906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
343-470
               

               
Cow position:
               
chr11:22103660-22103537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
343-474
               

               
Cow position:
               
chr11:34145011-34145138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
343-474
               

               
Cow position:
               
chr11:55117386-55117251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
343-475
               

               
Cow position:
               
chr11:40860805-40860939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
343-477
               

               
Cow position:
               
chr11:69810810-69810679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
343-478
               

               
Cow position:
               
chr11:45898149-45898281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
343-478
               

               
Cow position:
               
chr11:77758852-77758986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr11:12555507-12555648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr11:15504010-15503873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr11:21894248-21894381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr11:27746828-27746693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
79, 42
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr11:30764389-30764252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr11:41438316-41438452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr11:42793069-42793203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr11:44642383-44642513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr11:57724919-57725056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr11:61454623-61454762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr11:67931587-67931722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr11:68570762-68570899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
40, 90
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr11:83066398-83066268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
343-492
               

               
Cow position:
               
chr11:377740-377888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
343-492
               

               
Cow position:
               
chr11:3233989-3233841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
343-492
               

               
Cow position:
               
chr11:63516730-63516584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
343-493
               

               
Cow position:
               
chr11:13191129-13190979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
343-502
               

               
Cow position:
               
chr11:47586444-47586595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
343-507
               

               
Cow position:
               
chr11:2788286-2788122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 97
               

               
Conread position:
               
343-507
               

               
Cow position:
               
chr11:7315221-7315384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
139, 85
               

               
Conread position:
               
343-517
               

               
Cow position:
               
chr11:84890846-84891019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
139, 39
               

               
Conread position:
               
343-526
               

               
Cow position:
               
chr11:25165346-25165167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
150, 39
               

               
Conread position:
               
344-476
               

               
Cow position:
               
chr11:36647266-36647137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
344-480
               

               
Cow position:
               
chr11:58990412-58990283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
344-480
               

               
Cow position:
               
chr11:62979391-62979250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
345-458
               

               
Cow position:
               
chr11:9463736-9463623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
345-462
               

               
Cow position:
               
chr11:61958843-61958959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
345-473
               

               
Cow position:
               
chr11:62808747-62808869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
345-478
               

               
Cow position:
               
chr11:33348282-33348410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
345-478
               

               
Cow position:
               
chr11:81174792-81174664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
345-479
               

               
Cow position:
               
chr11:31525771-31525638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
345-479
               

               
Cow position:
               
chr11:53719845-53719718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr11:3726190-3726058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr11:6639412-6639283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr11:8105684-8105555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr11:23138157-23138289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr11:45872415-45872546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr11:49396146-49396279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr11:49934835-49934969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 94
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr11:58588249-58588117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr11:60302057-60302185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr11:63847750-63847622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr11:68909948-68910075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr11:71455695-71455560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
345-492
               

               
Cow position:
               
chr11:79728767-79728913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
89, 38
               

               
Conread position:
               
345-507
               

               
Cow position:
               
chr11:62155528-62155373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
345-596
               

               
Cow position:
               
chr11:77241272-77241030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
230, 30
               

               
Conread position:
               
346-480
               

               
Cow position:
               
chr11:5677627-5677493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
347-473
               

               
Cow position:
               
chr11:77766697-77766822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
347-477
               

               
Cow position:
               
chr11:16795252-16795377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
347-480
               

               
Cow position:
               
chr11:19755562-19755429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
347-480
               

               
Cow position:
               
chr11:35238734-35238601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-475
               

               
Cow position:
               
chr11:39462527-39462395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
349-478
               

               
Cow position:
               
chr11:32436231-32436103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
349-507
               

               
Cow position:
               
chr11:70382792-70382953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
360-480
               

               
Cow position:
               
chr11:9234517-9234400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               
Show alignments to all cow chromosomes.