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Cow genome map

           
Conread name:
           
Thy1-THY010006F10
        

               
Conread position:
               
15-238
               

               
Cow position:
               
chr24:11840384-11840164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
15-243
               

               
Cow position:
               
chr24:22689373-22689604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 201
               

               
Conread position:
               
21-213
               

               
Cow position:
               
chr24:33569143-33569336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
23-222
               

               
Cow position:
               
chr24:24532363-24532164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
81, 113
               

               
Conread position:
               
24-202
               

               
Cow position:
               
chr24:14373387-14373570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
26-220
               

               
Cow position:
               
chr24:20017236-20017433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
78, 190
               

               
Conread position:
               
26-232
               

               
Cow position:
               
chr24:18755949-18755736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
26-237
               

               
Cow position:
               
chr24:37974794-37975003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 92
               

               
Conread position:
               
27-238
               

               
Cow position:
               
chr24:34273006-34272786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr24:42984583-42984361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
76, 190
               

               
Conread position:
               
28-167
               

               
Cow position:
               
chr24:23637614-23637752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
28-184
               

               
Cow position:
               
chr24:19763337-19763501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
28-228
               

               
Cow position:
               
chr24:27940441-27940634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
124, 79
               

               
Conread position:
               
28-230
               

               
Cow position:
               
chr24:18874634-18874836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 14
               

               
Conread position:
               
28-230
               

               
Cow position:
               
chr24:31782064-31781854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
28-230
               

               
Cow position:
               
chr24:38478208-38478407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
29-194
               

               
Cow position:
               
chr24:38427925-38428093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr24:3148047-3148228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
29-207
               

               
Cow position:
               
chr24:30325594-30325777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
29-210
               

               
Cow position:
               
chr24:25947672-25947858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
29-223
               

               
Cow position:
               
chr24:10219200-10219393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
75, 97
               

               
Conread position:
               
29-223
               

               
Cow position:
               
chr24:11921723-11921919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
29-226
               

               
Cow position:
               
chr24:3464262-3464460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 10
               

               
Conread position:
               
29-226
               

               
Cow position:
               
chr24:5490808-5491007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
29-230
               

               
Cow position:
               
chr24:32739078-32739285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr24:18484805-18485011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
27, 120
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr24:33944592-33944384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
74, 190
               

               
Conread position:
               
29-236
               

               
Cow position:
               
chr24:28722063-28721866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
194, 71
               

               
Conread position:
               
29-237
               

               
Cow position:
               
chr24:13626474-13626261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
29-237
               

               
Cow position:
               
chr24:16641099-16640887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
75, 188
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr24:390287-390081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
16, 93
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr24:20801159-20801369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
74, 105
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr24:25194452-25194242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
74, 90
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr24:28700228-28700027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
120, 13
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr24:36035866-36036077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
29-238
               

               
Cow position:
               
chr24:41980474-41980682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
123, 73
               

               
Conread position:
               
29-242
               

               
Cow position:
               
chr24:35985548-35985757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
29-243
               

               
Cow position:
               
chr24:6007988-6008199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
30-235
               

               
Cow position:
               
chr24:35405182-35405393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 9
               

               
Conread position:
               
31-202
               

               
Cow position:
               
chr24:15289011-15288839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 93
               

               
Conread position:
               
31-211
               

               
Cow position:
               
chr24:24091150-24091338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
32-206
               

               
Cow position:
               
chr24:33372729-33372560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 82
               

               
Conread position:
               
32-210
               

               
Cow position:
               
chr24:34006023-34006205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
32-224
               

               
Cow position:
               
chr24:43499840-43499649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
32-231
               

               
Cow position:
               
chr24:37650858-37650658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 141
               

               
Conread position:
               
32-237
               

               
Cow position:
               
chr24:34896518-34896721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 82
               

               
Conread position:
               
32-247
               

               
Cow position:
               
chr24:26001570-26001355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr24:21524247-21524031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
124, 10
               

               
Conread position:
               
34-225
               

               
Cow position:
               
chr24:26569639-26569447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
34-236
               

               
Cow position:
               
chr24:16995059-16994859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
125, 73
               

               
Conread position:
               
35-207
               

               
Cow position:
               
chr24:19889776-19889959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 151
               

               
Conread position:
               
35-224
               

               
Cow position:
               
chr24:27219908-27220099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
35-229
               

               
Cow position:
               
chr24:18696062-18695865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
69, 175
               

               
Conread position:
               
35-230
               

               
Cow position:
               
chr24:15353626-15353427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
10, 123
               

               
Conread position:
               
35-238
               

               
Cow position:
               
chr24:27066411-27066207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
36-238
               

               
Cow position:
               
chr24:18734200-18734393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
37-222
               

               
Cow position:
               
chr24:41244689-41244504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
39-170
               

               
Cow position:
               
chr24:35210234-35210098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
39-191
               

               
Cow position:
               
chr24:17178783-17178626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
39-205
               

               
Cow position:
               
chr24:30236048-30235879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
64, 91
               

               
Conread position:
               
39-213
               

               
Cow position:
               
chr24:885269-885441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
39-215
               

               
Cow position:
               
chr24:10300255-10300075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 38
               

               
Conread position:
               
39-220
               

               
Cow position:
               
chr24:18811010-18810824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
39-225
               

               
Cow position:
               
chr24:28063126-28062936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 65
               

               
Conread position:
               
39-232
               

               
Cow position:
               
chr24:26928765-26928961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
64, 178
               

               
Conread position:
               
39-235
               

               
Cow position:
               
chr24:27553276-27553075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 52
               

               
Conread position:
               
39-237
               

               
Cow position:
               
chr24:2261846-2261645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
64, 177
               

               
Conread position:
               
39-237
               

               
Cow position:
               
chr24:27844357-27844550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
39-238
               

               
Cow position:
               
chr24:15861414-15861621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
40-223
               

               
Cow position:
               
chr24:25142792-25142601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 181
               

               
Conread position:
               
40-228
               

               
Cow position:
               
chr24:4634990-4635181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
66, 176
               

               
Conread position:
               
42-195
               

               
Cow position:
               
chr24:38006539-38006699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
42-195
               

               
Cow position:
               
chr24:43445838-43445995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
42-197
               

               
Cow position:
               
chr24:27719357-27719510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
117, 58
               

               
Conread position:
               
42-203
               

               
Cow position:
               
chr24:26808764-26808602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 91
               

               
Conread position:
               
42-222
               

               
Cow position:
               
chr24:18702573-18702390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
42-223
               

               
Cow position:
               
chr24:18021096-18021282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
42-224
               

               
Cow position:
               
chr24:25970911-25971083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
116, 57
               

               
Conread position:
               
42-225
               

               
Cow position:
               
chr24:18281462-18281642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 109
               

               
Conread position:
               
42-225
               

               
Cow position:
               
chr24:40025207-40025387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
42-226
               

               
Cow position:
               
chr24:33098299-33098484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
42-227
               

               
Cow position:
               
chr24:18474556-18474741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
42-228
               

               
Cow position:
               
chr24:12121072-12120883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 173
               

               
Conread position:
               
42-230
               

               
Cow position:
               
chr24:14551632-14551451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
42-230
               

               
Cow position:
               
chr24:20674751-20674943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
65, 175
               

               
Conread position:
               
42-230
               

               
Cow position:
               
chr24:32609822-32609632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
42-231
               

               
Cow position:
               
chr24:5360884-5360703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr24:9300803-9300611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
62, 171
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr24:27810322-27810141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
117, 32
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr24:33238081-33238282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
62, 182
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr24:39304738-39304938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 181
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr24:43219906-43220091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 19
               

               
Conread position:
               
42-234
               

               
Cow position:
               
chr24:40592886-40592692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
42-236
               

               
Cow position:
               
chr24:20225917-20225719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr24:3494054-3493861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr24:5632855-5633054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 174
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr24:10031747-10031561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
61, 52
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr24:11836228-11836427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 171
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr24:19000216-19000024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
61, 111
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr24:19624038-19623833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 181
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr24:19801012-19800824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 60
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr24:21606503-21606696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
62, 148
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr24:27906611-27906414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
61, 49
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr24:31159803-31159596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 184
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr24:34301864-34302059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr24:39523277-39523472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 81
               

               
Conread position:
               
42-238
               

               
Cow position:
               
chr24:41565927-41566118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 82
               

               
Conread position:
               
42-242
               

               
Cow position:
               
chr24:29605860-29606060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
42-243
               

               
Cow position:
               
chr24:18137127-18137330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
42-252
               

               
Cow position:
               
chr24:39903835-39904041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
117, 63
               

               
Conread position:
               
43-184
               

               
Cow position:
               
chr24:43027052-43027197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
43-190
               

               
Cow position:
               
chr24:3193099-3193249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
43-191
               

               
Cow position:
               
chr24:38693705-38693856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
43-193
               

               
Cow position:
               
chr24:28476683-28476528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
43-201
               

               
Cow position:
               
chr24:11035340-11035493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
43-207
               

               
Cow position:
               
chr24:27149554-27149390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
43-215
               

               
Cow position:
               
chr24:15557172-15557343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
106, 54
               

               
Conread position:
               
43-215
               

               
Cow position:
               
chr24:22420134-22419959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
43-222
               

               
Cow position:
               
chr24:36554529-36554705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
60, 73
               

               
Conread position:
               
43-222
               

               
Cow position:
               
chr24:37252329-37252150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
62, 82
               

               
Conread position:
               
43-225
               

               
Cow position:
               
chr24:20323326-20323512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
58, 174
               

               
Conread position:
               
43-227
               

               
Cow position:
               
chr24:7914181-7913994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 172
               

               
Conread position:
               
43-227
               

               
Cow position:
               
chr24:29587172-29586988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 49
               

               
Conread position:
               
43-228
               

               
Cow position:
               
chr24:35249937-35250125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr24:3542474-3542284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 172
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr24:21715178-21715366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr24:19730954-19730763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 170
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr24:3656192-3656383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 29
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr24:13586819-13587009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr24:14550962-14550778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr24:17689439-17689628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr24:18730519-18730327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 172
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr24:18884570-18884379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 55
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr24:19465737-19465934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 108
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr24:19599085-19598888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr24:23574987-23575179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
61, 170
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr24:23863454-23863646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 172
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr24:25756126-25756317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr24:31383280-31383103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr24:38815146-38814950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 176
               

               
Conread position:
               
43-234
               

               
Cow position:
               
chr24:11028515-11028708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
61, 98
               

               
Conread position:
               
43-237
               

               
Cow position:
               
chr24:22079635-22079441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr24:352432-352629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 148
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr24:2359013-2359209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
107, 60
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr24:18750882-18750680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr24:19535080-19535279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
21, 16
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr24:21519602-21519406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 172
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr24:22567278-22567080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
61, 159
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr24:29677737-29677939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 177
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr24:30483772-30483971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
116, 57
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr24:39910859-39911057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr24:42862797-42862601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
43-239
               

               
Cow position:
               
chr24:40055340-40055535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
43-240
               

               
Cow position:
               
chr24:35310899-35310698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
43-242
               

               
Cow position:
               
chr24:36010598-36010390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 139
               

               
Conread position:
               
43-246
               

               
Cow position:
               
chr24:5447094-5447299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
43-261
               

               
Cow position:
               
chr24:17308969-17309183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
115, 64
               

               
Conread position:
               
44-141
               

               
Cow position:
               
chr24:30544719-30544817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
44-178
               

               
Cow position:
               
chr24:12241892-12241754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
44-205
               

               
Cow position:
               
chr24:27284995-27284825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
44-215
               

               
Cow position:
               
chr24:28788029-28787853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
44-220
               

               
Cow position:
               
chr24:23046724-23046905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
44-224
               

               
Cow position:
               
chr24:27958296-27958479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
60, 172
               

               
Conread position:
               
44-228
               

               
Cow position:
               
chr24:6740003-6740181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr24:36286739-36286554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
103, 56
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr24:43373232-43373049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
44-231
               

               
Cow position:
               
chr24:30313858-30314042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr24:44896212-44896021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 173
               

               
Conread position:
               
44-236
               

               
Cow position:
               
chr24:19187103-19186919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
114, 56
               

               
Conread position:
               
44-237
               

               
Cow position:
               
chr24:28600267-28600458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
109, 17
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr24:2992709-2992902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr24:13888876-13888681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr24:29595629-29595832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 178
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr24:37395036-37395234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 167
               

               
Conread position:
               
44-238
               

               
Cow position:
               
chr24:42726629-42726427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
44-240
               

               
Cow position:
               
chr24:34742920-34742729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
44-249
               

               
Cow position:
               
chr24:5152697-5152489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
59, 172
               

               
Conread position:
               
45-221
               

               
Cow position:
               
chr24:250365-250545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
45-221
               

               
Cow position:
               
chr24:28234211-28234037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
45-229
               

               
Cow position:
               
chr24:44776004-44776191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
79, 54
               

               
Conread position:
               
45-238
               

               
Cow position:
               
chr24:27202255-27202066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
45-239
               

               
Cow position:
               
chr24:28775386-28775582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
46-184
               

               
Cow position:
               
chr24:18817559-18817416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
46-215
               

               
Cow position:
               
chr24:11155494-11155667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
46-223
               

               
Cow position:
               
chr24:18405110-18405289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 83
               

               
Conread position:
               
46-232
               

               
Cow position:
               
chr24:37267834-37267645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 169
               

               
Conread position:
               
46-232
               

               
Cow position:
               
chr24:43832691-43832511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
57, 89
               

               
Conread position:
               
46-234
               

               
Cow position:
               
chr24:35365538-35365725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
57, 89
               

               
Conread position:
               
46-238
               

               
Cow position:
               
chr24:19637756-19637560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
7, 55
               

               
Conread position:
               
48-232
               

               
Cow position:
               
chr24:17751941-17752129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 169
               

               
Conread position:
               
49-202
               

               
Cow position:
               
chr24:26588384-26588232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
110, 52
               

               
Conread position:
               
49-231
               

               
Cow position:
               
chr24:11036671-11036851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
49-232
               

               
Cow position:
               
chr24:8676991-8676806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
49-232
               

               
Cow position:
               
chr24:36711362-36711177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
49-237
               

               
Cow position:
               
chr24:32230338-32230530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
85, 50
               

               
Conread position:
               
50-238
               

               
Cow position:
               
chr24:27040215-27040025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 153
               

               
Conread position:
               
51-232
               

               
Cow position:
               
chr24:32890884-32891061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
108, 10
               

               
Conread position:
               
51-238
               

               
Cow position:
               
chr24:22194578-22194391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
104, 56
               

               
Conread position:
               
51-238
               

               
Cow position:
               
chr24:44987208-44987398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
53, 165
               

               
Conread position:
               
52-202
               

               
Cow position:
               
chr24:22221543-22221389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
52-214
               

               
Cow position:
               
chr24:27271092-27270926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
52-232
               

               
Cow position:
               
chr24:18741402-18741589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 168
               

               
Conread position:
               
52-238
               

               
Cow position:
               
chr24:23556174-23556361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
103, 49
               

               
Conread position:
               
53-216
               

               
Cow position:
               
chr24:17060056-17060215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
53-227
               

               
Cow position:
               
chr24:162168-161991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 163
               

               
Conread position:
               
53-232
               

               
Cow position:
               
chr24:6742387-6742204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 165
               

               
Conread position:
               
53-232
               

               
Cow position:
               
chr24:26880917-26880736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 150
               

               
Conread position:
               
53-232
               

               
Cow position:
               
chr24:28342524-28342339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 166
               

               
Conread position:
               
53-238
               

               
Cow position:
               
chr24:35632143-35631954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
54-228
               

               
Cow position:
               
chr24:42008180-42008009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
54-230
               

               
Cow position:
               
chr24:7476189-7476368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 162
               

               
Conread position:
               
54-231
               

               
Cow position:
               
chr24:31816736-31816562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
54-238
               

               
Cow position:
               
chr24:22647174-22647366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
54-242
               

               
Cow position:
               
chr24:30229635-30229446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 61
               

               
Conread position:
               
55-223
               

               
Cow position:
               
chr24:11735910-11736080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
49, 79
               

               
Conread position:
               
56-234
               

               
Cow position:
               
chr24:44040852-44041024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
57-208
               

               
Cow position:
               
chr24:15473687-15473531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 72
               

               
Conread position:
               
58-238
               

               
Cow position:
               
chr24:34465336-34465529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
39, 168
               

               
Conread position:
               
61-238
               

               
Cow position:
               
chr24:42194591-42194763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
66-214
               

               
Cow position:
               
chr24:17294046-17294197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
66-222
               

               
Cow position:
               
chr24:15448614-15448456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 131
               

               
Conread position:
               
68-237
               

               
Cow position:
               
chr24:14989349-14989178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
36, 154
               

               
Conread position:
               
69-232
               

               
Cow position:
               
chr24:36303171-36303334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
69-238
               

               
Cow position:
               
chr24:16645172-16645343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
70-231
               

               
Cow position:
               
chr24:7113378-7113206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 154
               

               
Conread position:
               
72-233
               

               
Cow position:
               
chr24:12200264-12200427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
75-236
               

               
Cow position:
               
chr24:35576395-35576558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 134
               

               
Conread position:
               
77-223
               

               
Cow position:
               
chr24:39218405-39218560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 145
               

               
Conread position:
               
77-238
               

               
Cow position:
               
chr24:32054791-32054638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
94-231
               

               
Cow position:
               
chr24:14648236-14648375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 120
               

               
Conread position:
               
105-230
               

               
Cow position:
               
chr24:22235579-22235452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 110
               

               
Conread position:
               
105-231
               

               
Cow position:
               
chr24:34008461-34008589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
105-234
               

               
Cow position:
               
chr24:28326968-28327098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
105-238
               

               
Cow position:
               
chr24:40404700-40404831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 99
               

               
Conread position:
               
106-232
               

               
Cow position:
               
chr24:5143847-5143976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
16, 110
               

               
Conread position:
               
110-238
               

               
Cow position:
               
chr24:30202930-30202801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 104
               

               
Conread position:
               
111-236
               

               
Cow position:
               
chr24:41412191-41412317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 104
               

               
Conread position:
               
114-236
               

               
Cow position:
               
chr24:21623325-21623202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
45, 97
               

               
Conread position:
               
116-229
               

               
Cow position:
               
chr24:29014067-29013952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
336-464
               

               
Cow position:
               
chr24:250666-250794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
115, 38
               

               
Conread position:
               
338-480
               

               
Cow position:
               
chr24:814363-814498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
338-562
               

               
Cow position:
               
chr24:8886818-8886607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
339-480
               

               
Cow position:
               
chr24:3493793-3493659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
340-492
               

               
Cow position:
               
chr24:21264608-21264756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
341-478
               

               
Cow position:
               
chr24:15861701-15861832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
342-502
               

               
Cow position:
               
chr24:6900725-6900567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
151, 97
               

               
Conread position:
               
343-473
               

               
Cow position:
               
chr24:17955544-17955673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
343-479
               

               
Cow position:
               
chr24:20024513-20024375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr24:5152134-5152000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr24:7913901-7913765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr24:18374675-18374541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr24:18485100-18485233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr24:39218944-39219080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 41
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr24:39493192-39493064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
343-480
               

               
Cow position:
               
chr24:40130024-40129889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
44, 88
               

               
Conread position:
               
343-492
               

               
Cow position:
               
chr24:35794839-35794985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
345-474
               

               
Cow position:
               
chr24:24457350-24457474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
345-478
               

               
Cow position:
               
chr24:20250002-20250135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
345-478
               

               
Cow position:
               
chr24:29595915-29596047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
104, 39
               

               
Conread position:
               
345-478
               

               
Cow position:
               
chr24:34533023-34532892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr24:2392093-2391958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr24:7917467-7917602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr24:11007115-11006982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr24:18390393-18390522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr24:27267529-27267402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr24:27810082-27809949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr24:29673415-29673286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr24:37246316-37246451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr24:38375180-38375051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
102, 37
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr24:39440659-39440790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
345-480
               

               
Cow position:
               
chr24:42345107-42345242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
345-492
               

               
Cow position:
               
chr24:38347580-38347435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
142, 81
               

               
Conread position:
               
345-503
               

               
Cow position:
               
chr24:40850059-40849903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
345-516
               

               
Cow position:
               
chr24:25320891-25320717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
345-563
               

               
Cow position:
               
chr24:2730674-2730882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
191, 30
               

               
Conread position:
               
347-480
               

               
Cow position:
               
chr24:25424956-25424830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
347-492
               

               
Cow position:
               
chr24:18324515-18324371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
348-480
               

               
Cow position:
               
chr24:40055829-40055955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               
Show alignments to all cow chromosomes.